Phyllostomus discolor (pale spear-nosed bat): 114492578
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Entry
114492578 CDS
T07739
Symbol
RFC1
Name
(RefSeq) replication factor C subunit 1 isoform X3
KO
K10754
replication factor C subunit 1
Organism
pdic
Phyllostomus discolor (pale spear-nosed bat)
Pathway
pdic03030
DNA replication
pdic03410
Base excision repair
pdic03420
Nucleotide excision repair
pdic03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pdic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
114492578 (RFC1)
03410 Base excision repair
114492578 (RFC1)
03420 Nucleotide excision repair
114492578 (RFC1)
03430 Mismatch repair
114492578 (RFC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pdic03032
]
114492578 (RFC1)
03400 DNA repair and recombination proteins [BR:
pdic03400
]
114492578 (RFC1)
DNA replication proteins [BR:
pdic03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
114492578 (RFC1)
DNA repair and recombination proteins [BR:
pdic03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
114492578 (RFC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
PTCB-BRCT
BRCT_2
AAA_22
AAA_14
RuvB_N
AAA_5
AAA_17
AAA_33
AAA_7
Rad17
AAA_16
AAA_18
nSTAND3
Zeta_toxin
AAA_30
RNA_helicase
NTPase_1
NPHP3_N
AAA_19
TIP49
Motif
Other DBs
NCBI-GeneID:
114492578
NCBI-ProteinID:
XP_028362754
UniProt:
A0A6J2L776
LinkDB
All DBs
Position
1:complement(23878193..23941465)
Genome browser
AA seq
1146 aa
AA seq
DB search
MDIRKFFGVIPSGKKPASETVKKNEKTKSAEETLKAKKGIKEIKVNSSCKEDDFKQKQSN
KKRRIIYESDSEPEETVQEKNAKKQPEKLPLSPKPGKILRQHPVTYISETDEEDDFTSKK
AASKSKENGRSTNSYLGASTVKKNEENTKTKSKPLSPIKLSPTSVLDYFGTASVRRSDKK
MVASKRKEPSQNTNDSRLNDEAIAKQLQLDEDAELERQLHEDEEFARTLAMLDEEPKKKK
ALKDPEERETFSSVQANLSKAEKHKDPYKGKTEQFLNEKKNYSPKKQTKCKSSKESQQHS
KSSPHKMGETSPKASTKLALLKKKEESSSKETEPVATKRKESAIELKETKSPKKMKSSPT
KKESVSPEDSEKRRANYQAYRSYLNREGPKALGSKEIPKGAENCLEGLTFVITGVLESIE
RDEAKSLIERYGGKVTGNVSKKTNYLVMGRDSGQSKRDKAAALGTKIIDEDGLLDLIRTM
PGKKSKYEIAVEAEMNKEKSRLQRTPSKNDQGKRKSSPTKNESESKRCRLTPRKDGCVKS
VRKEAGVSPRGLGFKEQVAEQTSGDGRAGQAADGSGEDKVASLLWVDKYKPASLKAVIGQ
QGDQSCANKLLRWLQNWHKSPSEDQRHAAKFGKFAGKDDGSSFKAALLSGPPGVGKTTTA
SLVCQELGYSYVELNASDTRSKNSLKEIVAESLSNTSIKGFYSSGAAPSGSTRHALIMDE
VDGMAGSEDRGGIQELIGLIKHTKIPIICMCNDRNHPKIRSLVHHCFDLRFQRPRVEQIK
AAMLSIAFKEGLKIPPPAMNEIILGANQDIRQVLHNLSMWCAQSKALTYDQAKADSHRAK
KDVKLGPFDVARKVFAAGEETAHMSLVDKSDLFFHDYSIAPLFVQENYVHVKPVAAGGDM
KKHLMLLSRAADSICDGDLVDRRIRSQQNWSLLPTQAIYASVLPGELMRGSLSQFPSFPS
WLGKHSSTGKHDRLVQDLALHMSLRTYSSKRTVNMDYLSHIRDALVRPLTSHGVEGIQDV
VALMDAYYLMKEDFENIMEISSWGGKPSPFSKLDSKVKAAFTRAYNKEVHLTPYSLQAVK
TPRHSTGPALDSEYSEELPEDDSQSDEKDQDSMETDAMIKKKTKASKPSKSEKDESRKRK
GRSAKK
NT seq
3441 nt
NT seq
+upstream
nt +downstream
nt
atggatattcggaaattctttggggttataccaagtggaaagaaacctgcgagtgagaca
gtaaagaagaatgagaaaacaaagtctgccgaagaaactttaaaagcaaagaaaggaata
aaggaaatcaaggtaaatagctcttgtaaagaggatgactttaaacagaagcaatcaaac
aagaaaaggaggatcatctatgaatcagactcagaaccagaggagacagtgcaggaaaaa
aatgccaaaaagcaaccagaaaaattaccattgtctcccaaacctggcaaaattctacga
cagcaccctgtcacctacatttcagaaacagatgaagaagatgactttacgtctaagaag
gcagcctctaaatcaaaagagaacggacgatctacaaatagttacctgggagcatcaacc
gtgaagaagaatgaagaaaacactaagaccaagagtaagcctttatcaccaataaaactt
agccccacctcagtgcttgattattttggaactgcaagtgtccgaagatcagacaagaag
atggtggcaagcaagcgaaaagagccttcacaaaacacaaatgattccagattgaatgat
gaagccattgccaagcaattgcaacttgatgaagatgcagagctggagagacaactgcac
gaagatgaagagtttgccagaacattagccatgttggatgaagaacctaagaagaaaaag
gctctaaaggacccagaagagagagaaacattctcatctgtccaggccaatttaagtaaa
gcagaaaaacataaagatccttataaaggaaaaacagaacagtttctgaatgaaaaaaag
aactacagtcctaagaagcaaactaaatgtaaaagttccaaagaatctcagcaacattcc
aagtcgtcacctcacaaaatgggagagacttctcccaaagccagtaccaagctggcgctt
ttgaaaaagaaggaagagagttcttctaaagaaacagagcctgtggccacaaaaagaaaa
gaaagtgccattgaactgaaagaaacaaaaagccctaagaaaatgaaaagttctcccact
aaaaaagagtctgtaagtcctgaagattctgagaagagacgcgctaattatcaagcatat
cgaagttacttaaatcgagaaggtcccaaagctctaggctccaaggaaatcccgaaggga
gctgaaaattgcttggaaggcctcacatttgtgatcacaggagtgctggagtccatcgag
cgagatgaagccaagtctctgattgaacgttacggaggaaaagtgaccggaaacgtcagc
aagaaaacaaactacctcgtcatgggtcgtgacagtggacagtccaagcgggacaaggca
gcagccttggggacaaaaattattgatgaggatggcctgttggatctgatccgaaccatg
ccaggcaagaagtccaaatacgaaatagcagttgaagctgagatgaataaagaaaagtcc
agattgcagagaacaccctcaaaaaatgaccaagggaaaagaaaaagcagtccgactaag
aatgaatcagaatccaaaaggtgcagactgacccccagaaaggacggctgtgtgaagtca
gtgagaaaggaagcgggtgtgtctccgagaggcctgggcttcaaggagcaggtggccgag
cagacgagtggtgatggccgcgctgggcaagcggctgatggcagcggggaagacaaagtg
gcctccttgctctgggtggataagtacaagccagcctcgctcaaggccgtcatcggacag
cagggtgaccagagctgcgccaacaaactcctacgctggctccagaactggcacaagagc
ccatcggaggaccagagacacgcagcgaagtttgggaaatttgctggcaaagacgacggc
tccagttttaaagcagcgctgctctcagggcccccaggtgttggcaaaaccaccacggcc
tccctggtttgtcaggaattgggatatagctacgtggaactgaatgcaagtgatactcgg
agtaagaacagtttgaaggagattgttgctgagtcactgagcaataccagcatcaaaggc
ttttattcaagcggagcggccccttcgggaagcacgagacacgccctcatcatggacgaa
gtggacggcatggcgggcagtgaggaccggggaggcattcaggaattaattggtctgata
aaacatacaaaaattcccattatttgcatgtgcaatgacagaaatcatcccaagattcgc
tctttggttcatcattgttttgatcttcgttttcaaagacctcgggttgaacaaattaag
gctgctatgttgtctattgcgtttaaagagggtttgaagattccccctccagctatgaat
gaaataattttgggagccaatcaagatatcagacaggtcttacacaacctgagcatgtgg
tgcgcgcagagtaaggccctcacctacgaccaggccaaggccgattcccacagagccaag
aaggatgtcaaactgggcccattcgatgttgcccggaaagtgttcgcagctggagaggag
accgctcacatgtcgctcgtggacaagtcagatctctttttccatgactattcgatagcg
cccctctttgtccaggagaactacgtacacgtgaagcctgtagctgcggggggggacatg
aagaagcacctgatgcttttaagccgggcggccgatagcatatgtgacggcgacctggtg
gaccggcggatccggagccagcagaactggagccttctgcccacacaggccatttacgcc
agcgttctccccggagagctgatgaggggctccctgagccagttcccctccttccccagc
tggctgggcaagcactcgtccacgggcaagcacgaccgcctcgtccaggacctcgcgctg
cacatgagcctccgaacttactccagcaaaagaactgtaaatatggattatctgtcacat
ataagggatgcacttgtacggcccttgacctcacacggggtagaaggaatacaggatgtt
gttgctcttatggatgcatattatttgatgaaagaagactttgagaatatcatggaaatt
agcagctggggaggcaagcctagtcccttctccaagctggattccaaggtgaaagcagcc
tttaccagggcttataataaggaggtccacctgaccccgtactcacttcaggcagtgaag
acacccaggcacagcacaggcccggcgctggactccgaatacagcgaagagttacccgaa
gacgactcgcagtctgacgagaaggatcaagactctatggagactgatgctatgatcaag
aaaaagacaaaagcttcaaagccttcaaaatcagaaaaagatgagtccagaaaacgaaaa
ggaagaagtgcaaagaaatga
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integrated database retrieval system
