Phyllostomus discolor (pale spear-nosed bat): 114492680
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Entry
114492680 CDS
T07739
Symbol
NRDE2
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear exosome regulator NRDE2
KO
K26109
nuclear exosome regulator NRDE2
Organism
pdic
Phyllostomus discolor (pale spear-nosed bat)
Brite
KEGG Orthology (KO) [BR:
pdic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdic03019
]
114492680 (NRDE2)
Messenger RNA biogenesis [BR:
pdic03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
114492680 (NRDE2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NRDE-2
TPR_14
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
TPR_12
eIF-3_zeta
Motif
Other DBs
NCBI-GeneID:
114492680
NCBI-ProteinID:
XP_028362930
UniProt:
A0A6J2LBH9
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All DBs
Position
1:complement(208385054..208418591)
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AA seq
1167 aa
AA seq
DB search
MALFPAFAGVSEAPDSGSSRKELDWLSNPSFCVGTVTTLSRQTEEATALVSEGSPRTRSP
LKSDPSDESDANKKRRQTSRKKKKEKKKRRKHQHRGKSRXRRGQSGSSASESDSGSGRDR
SSRGTGDGRKASEKPSQETSAAVDPGHRYIWLEDIQALTEDTFRTDKKPDPANWEYKSLY
RGDIARYKRKGDSCLGINPKKQRISWEGAPAAKKHAHRRVERYFTRKSVGLLSADGVAVS
SKGEPLAPEPAAPFIPVQGSDDVAPPVATWLNPLGIYDQSTTQWLQGQGPSEQESKQPDV
EPDREDTLLKAKVEEFNRRVRENPRDTQLWMAFVAFQDEVMKSPGLYALEEGGQEKRKRS
LKLILEKKLAILERAIESNQSSVDLKLAKLKLCAEFWEPPTLLKEWQKLIFLHPNNTALW
QRYLLFCQSQFSTFSVSKIHSLYGKCLSTLSAVKDGSILSHPELPGTEEAMFALFLQQCH
FLRQAGHAEKAISLFQAMVDFTFFKPDSVKGLPTKGQVEFFEPFWDSGEPRAGEKGARGW
RAWMHQQERGGWVVISPDEDDDDPEEDDQEIGDKTLPRWQIWLAAERARDRRHWRPWRPD
KTKKQTEDDCEDPERQVLFDDIGQSLIRLCSQDLRFQLIEAFLQFLGVPAGFTPPASCLY
LAMDENSIFDHGLHDEKPLTFLNLSFSGVSCVGRTDRLGCRRWARGHDREGGEFVRNVFH
LVLPLFSGGERSRLCVSWLRYEIAKVIWCLHTKKKRLKSQGKNCKKLAKNLLKEPENRNN
FCLWKQYAHLEWLLGNMEDARKVFDTALSIAGSGELRDREVCELSLLYAELELELELAAD
LRGAATARALHILTRLAENSPYGPYAGQVPAVHVLKARKAYERALQDCLGEDRVSDPPAP
DSLNRLVSVVKCFMLFQYLTVGIDAAVRIYEQVFAKLKGSVSPEGPGPEAGAGAGSVSSA
LEAATLMHTSLLRFHMRVSVYPLAPLRQALSEALKLYPGNQVLWRSYVQIQSQSHNASRT
RRFFDAVARSAEPLEPWLFAIEAEKMRKRLVETVQRVDGREVHATIPETGLTHRIRALFE
NATRSDHGSQCPLLWRMYLNFLVSLGNKERSKGVFYKALQNCPWAKVLYMDAVEYFPDEM
QEVLDLMTEKELRVRLPLEELELLLED
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgttcccggcctttgcgggtgttagtgaggctcccgatagcgggagctccagg
aaagaattagactggctgagcaacccaagcttttgtgtcgggaccgtgacgactctgagc
cgacaaactgaagaggccacagcgctcgtttctgaagggtcgccgcggaccaggagtccc
ctgaagtcagacccttcagacgagagtgacgcgaacaaaaagcgcagacaaaccagcaga
aagaagaagaaagagaagaagaagaggaggaagcatcagcaccgcgggaaaagcaggngg
agacgtgggcagtcgggcagcagcgcgtccgagtcggactcgggctctggccgggacagg
tcttccaggggcaccggagacggcaggaaagcgtcagagaagccgagtcaggaaaccagt
gctgctgtggaccccggacatcgctacatctggcttgaggacatccaggccctgacggaa
gacaccttcagaacagacaagaagccagaccctgcgaactgggaatataagtccctgtac
cgaggagacatagcaaggtacaagaggaagggagactcctgcctgggcatcaacccgaag
aagcagcgcatatcctgggagggggcccccgcggccaagaagcacgcgcacaggcgtgtc
gagcgctacttcacgcggaagagcgtggggctgctgagcgccgacggggttgccgtcagc
agcaagggcgagcctctcgcgcctgagccagcagcgcccttcatcccggtgcagggctcg
gacgacgtggcccctcccgtggcaacctggctgaaccctctggggatttacgatcagtcc
accacgcagtggctgcagggacagggtccttcagagcaggagtcaaagcagccggacgta
gagccagaccgcgaggacacgcttctcaaggccaaggtggaggagtttaacaggcgggtg
cgggagaatcctcgggacactcagctgtggatggcgttcgttgctttccaggacgaggtc
atgaagagccctggcctgtatgccctggaggaaggagggcaggagaagcgcaagaggtcc
ctgaagctcatcctggagaagaagctggccattctggagcgagccatcgagagcaaccag
agcagtgtggacctgaagctcgccaagctgaagctctgcgccgagttctgggagcccccc
acgctgctcaaggagtggcagaagctgatcttcctgcaccccaacaacaccgccctgtgg
cagagataccttctgttttgccagagccagttcagcaccttttcggtatcgaaaattcac
agcctgtatgggaaatgcctgagcactttgtcggccgtgaaggacggcagcatcttgtct
caccccgagctgcccggcaccgaggaggccatgtttgcgctcttcctgcagcagtgccac
ttcctgcgccaggccggccacgctgagaaggccatctctctgttccaggccatggtcgac
ttcaccttcttcaagcccgacagcgtgaaaggcctgcccaccaaaggacaggtagagttc
ttcgagcccttctgggacagcggagagccccgggccggggagaagggcgcccgcggctgg
agagcgtggatgcaccagcaggagcggggcggctgggtggtcatctctccagacgaggac
gacgatgacccggaagaggatgaccaggaaatcggagataagactctgcccaggtggcag
atctggctggcggccgagcgggcccgagaccggaggcactggcggccgtggcgcccggac
aagaccaagaagcaaaccgaggacgactgcgaggacccagagagacaggtgttgtttgac
gatatcggacagtctctgatccgactctgcagccaggatctgcggttccagctgatcgag
gcctttctgcagttcctgggcgtgcctgctggcttcaccccccctgcctcctgcctttac
ctggccatggacgagaacagcatcttcgatcacggacttcacgacgaaaagccactgact
tttctcaacctttccttttccggcgtgagctgtgttggccgcacggaccggctgggctgc
cggcgctgggccagaggccacgaccgagagggcggggagttcgtccgcaacgtcttccac
ctggtgctgccgctgttctcgggcggggagcggtcccggctctgcgtctcctggttgcgg
tacgagatcgcaaaggtcatttggtgtcttcacactaaaaagaagagattaaagtcacaa
gggaagaactgcaaaaaactagccaagaatctcctgaaggagccagaaaaccgcaacaat
ttttgcctctggaagcagtatgcacatctggaatggttgctgggcaacatggaggacgcc
aggaaagtttttgacacggctctgagcatagcagggagcggagaactgagggaccgcgag
gtctgtgagctcagtctgctctatgccgagctggagctggagctggagctggccgcggac
ctgcgaggggccgccacggcccgggctcttcacatactgaccaggctggccgagaacagt
ccctatgggccctacgccgggcaggtcccagccgttcacgtcctgaaagctcggaaggcc
tacgaacgggcgctgcaggactgcttgggtgaggaccgcgtgtctgacccacctgccccc
gattcccttaaccgcctcgtcagtgtggttaagtgcttcatgctcttccagtatctgacc
gtagggatcgacgccgccgtgcggatatacgagcaggtgtttgcaaagctgaagggctcc
gtttccccggaaggcccaggcccggaggccggcgccggcgccgggagcgtgagcagtgcc
ctcgaggccgccactctgatgcacacgagcctgctccggttccacatgagagtcagcgtc
tacccgctggcgcctctgcggcaggcactctcggaggccctgaagttgtatcccggcaac
caggtgctttggaggtcgtacgtgcagattcagagccagtcccacaatgccagtaggacc
agaaggttcttcgacgcggtcgccaggagtgcagaacccttggagccgtggctgtttgcg
attgaagctgagaaaatgaggaaaaggctggtggagacggttcagagggtagatggcaga
gaggtgcacgccacaattcccgagaccggcctgacgcaccggatcagagccctgtttgaa
aacgcgacccggagtgaccacggcagccagtgccccttactgtggaggatgtatttgaat
tttttggtgtccttgggaaacaaggaaaggagcaaaggtgtcttctacaaggcgctccag
aactgtccttgggcgaaggtgttgtacatggatgccgtggagtacttccctgatgagatg
caggaggtcctggacctgatgacagagaaggagctccgggtgcgcctgccgctggaggag
ctggagcttctgctggaggactag
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