Phyllostomus discolor (pale spear-nosed bat): 114492813
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Entry
114492813 CDS
T07739
Symbol
UPF2
Name
(RefSeq) LOW QUALITY PROTEIN: regulator of nonsense transcripts 2
KO
K14327
regulator of nonsense transcripts 2
Organism
pdic
Phyllostomus discolor (pale spear-nosed bat)
Pathway
pdic03013
Nucleocytoplasmic transport
pdic03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pdic00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
114492813 (UPF2)
03015 mRNA surveillance pathway
114492813 (UPF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdic03019
]
114492813 (UPF2)
Messenger RNA biogenesis [BR:
pdic03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
114492813 (UPF2)
mRNA cycle factors
P-body specific factors
114492813 (UPF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
Upf2
Motif
Other DBs
NCBI-GeneID:
114492813
NCBI-ProteinID:
XP_028363160
UniProt:
A0A6J2LC68
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Position
1:complement(67716146..67822686)
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AA seq
1268 aa
AA seq
DB search
MPAERKKPASMEEKESLLNNKEKDCAERRPVSSNREKPKDEIKLPAKKEVIKVPEDXKKK
LEEDKRKKETRTQEKEEEKVKAEEEXKEKEEEEKKKHEEEERKKQEEQAKRQQEEEAAQL
KKEESLQLHQEAWERHQLRKELRSXNQNAPDNRPVGNFFSRLDSSLKKNTAFVKKLKTIT
EQQRDSLSHDFNGLNLSKYIAEAVASIVEAKLKISDVNCAVHLCSLFHQRYVDFAPSLLQ
VWXKHFEARKEEKTPXHHQIKTDLRFIAELTIVGIFTDKEGLSLIYEQLKNIINADRESH
THVSVVISFCRHCGDDIAGLVPRKVKSAAEKFNLTFPPSEIISPEKQQPFQNLLKEYFTS
LTKHLKRDHRELQNTERQNRRILHSKGELSEDRHKQYEEFAMSYQKLLANSQSLADLLDE
NMPDLPQDKPTPEEHGPGIDIFTPGKPGEYDLEGGIWEDEDARNFYENLIDLKAFVPAIL
FKDNEKSCQNKECNKDDSKEAKEPKDNKEVSNSDDLELELENLEINDDSLELEGADEAED
LTKKLLDEQEQEDEEASTGSHLKLIVDAFLQQLPNCVNRDLIDKAAMDFCMNMNTKANRK
KLVRALFIVPRQRLDLLPFYARLVATLHPCMSDVAEDLCSMLRGDFRFHVRKKDQINIET
KNKTVRFIGELTKFKMFTKNDTLHCLKMLLSDFSHHHIEMACTLLETCGRFLFRSPESHL
RTSVLLEQMMRKKQAMHLDARYVTMVENAYYYCNPPPAEKTVKKKRPPLQEYVRKLLYKD
LSKVTTEKVLRQMRKLPWQDQEVKDYVICCMINIWNVKYNSIHCVANLLAGLVLYQEDVG
IHVVDGVLEDIRLGMEVNQPKFNQRRISSAKFLGELYNYRMVESAVIFRTLYSFTSFGVN
PDGSPSSLDPPEHLFRIRLVCTILDTCGQYFDRGSSKRKLDCFLVYFQRYVWWKKSLEVW
TKDHPFPIDIDYMISDTLELLRPKIKLCNSLEESIRQVHDLEQEFLIKLGLVNDKDSKDS
VAEGENLEEDEEEEEGGAETEEQSGNESEVNEPEEEEGSDNDEDEGEEEEEENTDYLTDS
NKENETDEENNEVMIKGGGLKHVPCVEDEDFIQALDKMMLENLQQRSGESVKVHQLDVAI
PLHLKSQLRKGPPLGGGEGEAESADTMPFVMLTRKGNKQQFKILNVPMSSQLAANHWNQQ
QAEQEERMRMKKLTLDINERQEQEDYQEMLQSLAQRPAPANTNRERRPRYQHPKGAPNAD
LIFKTGGR
NT seq
3807 nt
NT seq
+upstream
nt +downstream
nt
atgccagctgagcgtaaaaagccagcaagtatggaagaaaaagaatctttgctaaacaac
aaggagaaagactgtgctgaaaggcgtccagtgagcagcaacagggagaaaccaaaagac
gagatcaagctccctgccaagaaggaagttattaaggtccctgaagatnaaaagaagaaa
ctggaagaagataagagaaaaaaggagacaaggacgcaagaaaaagaagaagaaaaggta
aaggcagaagaggaanttaaagaaaaagaggaagaagaaaaaaagaaacatgaagaggaa
gagagaaagaagcaagaagaacaggcaaaacgacaacaagaggaagaagctgcccagttg
aaaaaagaagaatctcttcagcttcatcaggaagcttgggaacgacatcagttaaggaag
gaacttcgtagcnaaaaccaaaatgctccagacaaccgaccagtaggaaatttctttagt
cgactagactcaagtttgaagaaaaataccgcttttgtcaagaaactaaaaactattacg
gaacaacagagagactccttgtcccatgattttaatggcctaaatttaagcaaatacatt
gcagaagctgtagcttctattgtggaagcaaagctaaaaatatctgatgtgaattgtgct
gtgcacttatgttctctgtttcaccagcgctatgtcgactttgctccatcacttctgcag
gtttggnaaaaacattttgaagcaaggaaagaagagaaaacaccctaacatcaccaaatt
aaaactgatttgcgtttcattgcagaattgacaatagttgggattttcactgacaaggaa
ggtctatctttaatttacgaacagctaaaaaatattattaatgctgatcgggaatcacat
actcatgtttctgtggtgattagtttttgtcgacattgtggagatgatattgctggactt
gtaccaaggaaagtaaagagtgctgcagagaagtttaatttgactttccctcctagtgag
ataattagtccagagaaacaacaacctttccagaatcttttaaaagaatactttacatct
ttgaccaaacacctgaaaagggaccacagggagctacagaatactgagagacaaaatagg
cgtattctacattctaaaggggagctaagtgaagatagacataaacagtatgaggaattt
gctatgtcctatcagaagctgctggcaaattctcaatccttagcagaccttttggatgaa
aatatgccagatcttcctcaggacaaaccaacaccagaagagcatgggcctggaattgat
atatttacacctggtaaacctggagaatatgacttggaaggtggtatatgggaagatgaa
gatgctcggaatttttatgagaaccttattgatttgaaagcttttgttccagccatcttg
tttaaagataatgaaaaaagttgtcagaataaagagtgcaacaaagatgattctaaagag
gcaaaagaacctaaggataataaggaggtatcaaattctgatgatttggaacttgaattg
gagaacctagaaattaatgatgacagcttggagttagagggtgcagatgaagctgaagat
cttacaaaaaaacttcttgatgagcaagaacaagaggatgaagaggccagcactggatct
catctcaagctcatagtagatgctttcctccagcaattgcccaactgtgtcaatagagat
ttgatagacaaggcagcaatggatttttgtatgaacatgaacacaaaagcaaataggaag
aagttggtacgggcactttttatagttcccagacaaaggttggatttgctaccattttat
gcaagattggttgctacattgcatccctgcatgtctgatgtagcagaggatctttgttcc
atgctgaggggggatttcagatttcatgttcgaaaaaaagaccagatcaacattgaaaca
aagaacaaaactgttcgttttattggagaactaactaagtttaagatgttcacaaaaaat
gatacactacattgtttaaagatgcttctatcagacttttcccatcaccatattgaaatg
gcatgtaccttactggaaacatgtggaaggtttcttttcagatctccagaatctcacttg
aggaccagtgtacttttggaacaaatgatgagaaagaaacaagcgatgcatcttgatgca
agatatgtcacaatggtggagaatgcgtactactactgcaacccaccaccagctgagaaa
acagtgaaaaagaaacgtcctcctctccaggaatatgtccggaaacttttatacaaggac
ctctccaaggtcaccactgagaaggttttgagacagatgcgaaagttgccctggcaggac
caagaagtgaaagactatgttatttgttgtatgataaacatctggaatgtgaaatacaat
agtattcattgtgtggctaacctcttagccggactagtgctctaccaagaggatgttgga
atccatgttgtggatggagttttagaagatattcgattaggaatggaggttaatcagcct
aaatttaatcagagacgtatcagcagtgctaagttcttaggggaactttataattaccga
atggtggaatcagctgttatttttagaactctttattcttttacttcatttggtgttaac
cccgatggctctccaagttcactggaccctcctgagcaccttttcagaatcagactagtg
tgcacaattttggacacctgtggccagtactttgacagaggttccagtaaacgaaaactt
gattgcttccttgtatattttcagcgttatgtttggtggaagaagagtttggaggtttgg
acaaaagatcatccatttcctattgacatagattacatgatcagtgatacactagaactg
ctaagaccaaagatcaaactctgtaattctctggaagaatccatcaggcaggtacacgac
ttggaacaagaattcttaataaaactaggcctagtaaatgacaaagattcaaaagattct
gtggcagaaggagaaaatcttgaagaggatgaagaagaagaagaaggaggagctgaaaca
gaggaacaatctggaaatgaaagtgaagtaaatgaaccagaagaagaggagggttctgat
aatgatgaggatgaaggagaggaagaagaggaagaaaacacagattaccttacagattca
aataaggagaatgaaaccgatgaagaaaataatgaggtaatgatcaaaggaggtggactt
aaacatgtaccttgtgtagaagatgaggatttcattcaagctctggataaaatgatgcta
gaaaatcttcagcaacgaagtggcgaatctgttaaggtgcaccaacttgatgtcgctatt
cccttgcatctcaaaagccagctgaggaaagggcccccacttggtggtggggaaggagag
gcagaatccgcagacacgatgccatttgtcatgctaacaagaaaaggcaataaacagcag
tttaagatccttaatgtacccatgtcttcccaacttgctgcaaatcattggaaccagcaa
caggcagaacaagaagaaaggatgagaatgaaaaagctcacactagatatcaatgaacga
caagaacaagaagattatcaagaaatgctgcaatctcttgcccagcgtccagctccagca
aacaccaatcgggagcggcggcctcgttaccaacatccaaagggagcacctaatgcggat
ctaatctttaaaactggtgggaggtag
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