Phyllostomus discolor (pale spear-nosed bat): 114493192
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Entry
114493192 CDS
T07739
Symbol
CPSF2
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 2
KO
K14402
cleavage and polyadenylation specificity factor subunit 2
Organism
pdic
Phyllostomus discolor (pale spear-nosed bat)
Pathway
pdic03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pdic00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
114493192 (CPSF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdic03019
]
114493192 (CPSF2)
Messenger RNA biogenesis [BR:
pdic03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
114493192 (CPSF2)
U7-dependent histone pre-mRNA processing factors
114493192 (CPSF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_6
CPSF100_C
Beta-Casp
RMMBL
Lactamase_B
Anti-Pycsar_Apyc1
Lactamase_B_2
Motif
Other DBs
NCBI-GeneID:
114493192
NCBI-ProteinID:
XP_028363739
UniProt:
A0A6J2LCJ9
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Position
1:209620714..209651270
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AA seq
782 aa
AA seq
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MTSIIKLTTLSGVQEESALCYLLQVDEFRFLLDCGWDEHFSLDIIDSLRKHVHQIDAVLL
SHPDPLHLGALPYAVGKLGLNCAIYATIPVYKMGQMFMYDLYQSRHNTEDFTLFTLDDVD
AAFDKIQQLKFSQIVNLKGKGHGLSITPLPAGHMIGGTIWKIVKDGEEEIVYAVDFNHKR
EIHLNGCSLEMLSRPSLLITDSFNATYVQPRRKQRDEQLLTNVLETLRGDGNVLIAVDTA
GRVLELAQLLDQIWRTKDAGLGVYSLALLNNVSYNVVEFSKSQVEWMSDKLMRCFEDKRN
NPFQFRHLSLCHGLSDLARVPSPKVVLASQPDLECGFSRDLFIQWCEDPKNSIILTYRTT
PGTLARFLIDNPSEKITEIELRKRVKLEGKELEEYLEKEKLKKEAAKKLEQSKEADIDSS
DESDVEEDADQPTAHKAKHDLMMKGEGSRKGSFFKQAKKSYPMFPAPEERIKWDEYGEII
KPEDFLVPELQATEEEKSKLESGLTNGDEPMDQDLSDVPTKCISMTESIEIKARVTYIDY
EGRSDGDSIKKIINQMKPRQLIIVHGPPEASQDLAECCRAFGGKDIKVYMPKLHETVDAT
SETHIYQVRLKDSLVSSLQFCKAKDAELAWIDGVLDMRVSKVDTGVILEEGELKDDGEDS
EMQVDAPSDASVIAQQKAMKSLFGDDEKETGEESEIIPTLEPLPPNEVPGHQSVFMNEPR
LSDFKQVLLREGIQAEFVGGVLVCNNQVAVRRTETGRIGLEGCLCQDFYRIRDLLYEQYA
IV
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgacgtctatcatcaaactgacgaccctgtccggggttcaggaggagtctgctctctgc
tacctgctgcaggtcgacgagttccggttcttgctggactgcggctgggacgagcacttc
tccctggacattatcgattcgctgaggaagcacgtgcaccagatcgacgcggtgctgctg
tcgcacccggacccgctgcacctcggggcgctcccctacgccgtcggcaagctgggcctg
aactgcgccatctacgccaccatccccgtttacaagatggggcagatgttcatgtatgac
ctttaccagtctcgacacaacacggaagacttcacgctcttcacgctggacgatgtggac
gcagccttcgataaaatccagcagttgaagttctcgcagattgtgaacctgaaaggtaaa
ggacatggcctgtccatcacacctttgcccgccggtcacatgataggtggaacaatatgg
aaaatagtcaaagatggcgaagaagaaattgtttatgcagttgacttcaaccacaagagg
gagatccacttaaatggatgttccctggaaatgctaagcagaccgtccctgctcatcacg
gactccttcaatgccacgtacgtgcagcccaggagaaaacagagggatgagcagctgctg
acaaacgtcctggagacgctgcgcggtgacggcaacgtgctgatcgcggtggacaccgcg
ggcagggtgctggagcttgcgcagctgctcgaccagatctggaggacgaaggacgcgggc
ttgggcgtctactcgctggccctgctgaacaacgtcagctacaacgtggtggagttctcc
aagtcccaggtggagtggatgagcgacaaactgatgaggtgttttgaagacaaaagaaac
aatccgtttcagtttcgccatctctccttgtgccacggtctctctgacttggctcgggtc
cccagccctaaagtggtgctcgccagccagcccgacctggagtgtgggttttcaagagac
ctcttcattcagtggtgcgaggaccctaaaaactcaatcattctaacctacagaaccact
cctgggaccttagcgcgtttcttaatcgacaatccctccgaaaaaattacagaaatagag
ttgaggaaacgcgtaaagctcgaagggaaagaactcgaagaatacttggaaaaggagaaa
ctaaagaaagaagctgccaaaaaacttgagcagtccaaagaggcagacatcgactccagc
gacgagagcgacgtggaggaggacgccgaccagccgacggcccacaaggccaagcacgac
ctgatgatgaagggcgaagggagtcgcaagggcagtttcttcaaacaggctaagaagtct
taccccatgtttcccgccccagaggagagaattaaatgggatgaatacggagagatcatc
aaaccggaggatttcttggtgccagaacttcaagctactgaggaagaaaaaagcaaatta
gaatctggcttgacaaacggagatgaacccatggatcaggatttatctgatgttcctacc
aagtgcatttccatgacagaatctattgaaataaaagccagggttacctacatagactac
gaagggcgctctgacggggattccattaaaaagatcattaaccagatgaagccgcgccag
ctgatcatcgtccacggccccccagaggccagccaggatctcgcggagtgctgccgggcc
ttcggcgggaaggacattaaagtgtacatgcccaagctgcacgagacggtcgacgccacc
agcgagactcacatctaccaggtgagattgaaagactcgctcgttagctccctgcagttt
tgtaaggcgaaagatgctgagctagcctggatagacggtgtcttagacatgcgggtctcc
aaagtggacacgggagtgatcttagaagaaggagaactgaaggatgacggggaagactcg
gaaatgcaggtggacgcgccctcagatgccagcgtcatcgcacagcagaaggccatgaag
agcctgttcggagacgacgagaaagaaacaggcgaagaaagtgagatcattccgactttg
gagcccctgccgcctaatgaggttcctggacatcagtcggtttttatgaacgaaccaagg
ctgtcagacttcaaacaagttcttttacgggagggaattcaagctgaatttgtaggcggt
gtcctcgtttgcaacaatcaagtagccgtccgcagaacggaaactggacgcattggacta
gaaggctgcctttgtcaagatttttataggataagagaccttttatatgaacagtatgcc
attgtgtaa
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