Phyllostomus discolor (pale spear-nosed bat): 114493395
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Entry
114493395 CDS
T07739
Symbol
PRPF39
Name
(RefSeq) LOW QUALITY PROTEIN: pre-mRNA-processing factor 39
KO
K13217
pre-mRNA-processing factor 39
Organism
pdic
Phyllostomus discolor (pale spear-nosed bat)
Brite
KEGG Orthology (KO) [BR:
pdic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pdic03041
]
114493395 (PRPF39)
Spliceosome [BR:
pdic03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
114493395 (PRPF39)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
HAT_Syf1_CNRKL1_N
TPR_14
HAT_Syf1_CNRKL1_C
TPR_12
TPR_16
TPR_MalT
Motif
Other DBs
NCBI-GeneID:
114493395
NCBI-ProteinID:
XP_028364022
UniProt:
A0A6J2L8M4
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All DBs
Position
1:complement(123754823..123780142)
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AA seq
693 aa
AA seq
DB search
MQNSHMDEYKNSSNGSTDNSSEVVVEQSADFTTEIMNVTEMEQSPDGSPNVNATTEENEI
ANAVDLPVTEXEANFPPDYEKFWKTVENNPQXFTGWVYLLQYVEQENHLRAARKAFFDKF
FIHYPYCYGYWKKYADLEKRHDNINNQMRCTAGGFQAIPLSVDLWIHYINFLKETLDPGD
SETNSTIRGTFEHAVLAAGTDFRSDRLWEMYINWENEQGNLREVTAIYDRILGIPTQLYS
HHFQRFKEHVQNNLPRDLLTGEQFXQLRRELASVNGHSGDDGPPGDDLPSGIEDITDPAK
LITEIENMRHRIIEIHQEMFNYNEHEVSKRWTFEEGIKRPYFHVKPLEKAQLKNWKEYLE
FEIENGTHERVVVLFERCVXSCALYEEFWIKYAKYMENHSIEGVRHVFSRACTIHLPKKP
MVHMLWAAFEEQQGNINEARNILRTFEECVLGLAMVRLRRVSLERRHGNMEEAEHLLQDA
IKSAKSNNESSFYAIKLARHLFKIQKNFAKSRKVLLEAIERDKENTKLYLNLLEMEYSGD
LKQNEENILNCFDKAIHGSLPIKMRITFSQRKVEFLEDFGSDVNKLLNAYDEHQTLLKEQ
DSLKRKAENGYKNQKEKKAHTEDTTSSSTQMIEGDLQANQAAYNYSAWYQYNYQNPWNYG
QYYPPLQLDGNIQISDGVCKSTRLFFFNEGCKT
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaattctcatatggatgagtacaaaaattctagtaatggcagcacagacaatagt
tcagaggtagtggtagaacagtctgctgatttcactactgaaattatgaatgttacggaa
atggaacagtcacctgatggatctcctaatgtgaatgcaactacagaagaaaatgaaata
gcaaatgctgtggaccttccagtgacagaancggaagcaaatttccctccagattatgaa
aaattttggaaaactgtagaaaataatcctcagngatttacaggctgggtgtatttgctt
cagtatgtagaacaggagaatcacttgagggctgccaggaaagcgttttttgacaaattt
ttcatacactatccctattgctatggttactggaaaaaatatgcagaccttgaaaagcgg
catgacaacattaacaatcagatgaggtgtaccgccgggggctttcaggcaatacctctt
agtgttgacctttggatacattatataaacttcttaaaagaaacattggaccctggggat
tctgagacaaacagtacaataagaggaacttttgagcatgctgttctagctgcaggaaca
gatttccgatctgacagactgtgggaaatgtatataaactgggagaatgaacagggaaac
ctgagagaagttacagctatatatgatcgtattcttggtattccaacacagctgtatagt
catcattttcagagatttaaagagcatgtacagaataatttgcctagagatcttctgact
ggtgaacagtttnttcagctgcgaagggaattagcttctgtaaatggacatagtggtgat
gatggtccacctggtgatgatctgccatcgggaattgaagacatcactgatccagcaaag
ctaattactgaaatagaaaacatgaggcatcgaatcattgaaattcatcaagaaatgttt
aattataatgagcatgaagttagtaaaaggtggacatttgaagaaggtattaaaagacct
tattttcatgtgaaaccattggaaaaggcacaactaaaaaactggaaagaatatttagaa
tttgaaattgaaaatgggactcatgaacgagttgtggttctctttgaaagatgtgtcnna
tcatgtgccctctatgaggagttttggattaagtatgccaagtacatggaaaaccatagc
atcgaaggagtgaggcatgtcttcagcagagcttgcactattcatctcccaaagaaaccc
atggtgcatatgctttgggcagcttttgaggaacagcagggtaatattaatgaagccagg
aatatcttgagaacatttgaagaatgtgttctaggactggcaatggttcgtttgagaaga
gtaagtttagaacgacgacatggaaatatggaagaagctgaacatttgcttcaggatgcc
attaagagtgccaagtcaaataacgaatcatcgttttatgctatcaaactagcccgacat
cttttcaaaatacaaaaaaactttgcaaaatcaagaaaggtgcttttggaagcaattgaa
agagacaaagagaacacaaagttatacctcaatttacttgaaatggaatatagtggtgat
ctcaaacaaaatgaagaaaatatcctaaattgttttgacaaagctatacatggttcatta
cctattaaaatgagaattacattttctcagagaaaagtggaatttcttgaagattttggt
tcagatgttaataagcttctgaatgcttatgatgaacaccagacactcctaaaagaacaa
gattcgttaaaaaggaaagcagaaaatgggtataagaaccagaaagaaaagaaagcacac
acagaagatacaacttcatcatctacacagatgattgagggtgatttacaggcaaaccaa
gctgcatataattacagtgcctggtatcaatacaattaccagaatccttggaattatgga
cagtattatcctcccctccaacttgatgggaacatacaaatatcagatggagtgtgcaaa
agtacgagactttttttttttaatgagggatgtaaaacatag
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