Phyllostomus discolor (pale spear-nosed bat): 114493882
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Entry
114493882 CDS
T07739
Symbol
SCAF8
Name
(RefSeq) LOW QUALITY PROTEIN: SR-related and CTD-associated factor 8
KO
K13191
RNA-binding protein 16
Organism
pdic
Phyllostomus discolor (pale spear-nosed bat)
Brite
KEGG Orthology (KO) [BR:
pdic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pdic03021
]
114493882 (SCAF8)
03041 Spliceosome [BR:
pdic03041
]
114493882 (SCAF8)
Transcription machinery [BR:
pdic03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
114493882 (SCAF8)
Spliceosome [BR:
pdic03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
114493882 (SCAF8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
RRM_1
Transformer
DUF3525
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
114493882
NCBI-ProteinID:
XP_028364442
UniProt:
A0A6J2L9R9
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All DBs
Position
4:201122414..201199431
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AA seq
1337 aa
AA seq
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MPQLLLPALPPPSSPGAAGSCRPSGGECSGRRLFRRRARGLRTDNMEAVKIFNSEDCAST
PACTDCFSSSMDTRSILYSLNDYKPPISKAKMTQITKAAIKAIKFYKHVVQSVEKFIQNV
NPEYKVPWTYVLTSKCTTMLGHQGGQERMSLGNARFRNNIISTFQNLYRCCPGDDTSKIV
RVLNLWQKNNVFKSEIIQPLLDMAAGIPPPVVTPVLAGTTAAMSNTPGTPVTPVTPANVV
QGLPDPWVSQIANTDTLTAVAQILQSPQASQFQQLIQTLQIQQQKPQPSILQALDAGLVV
QLQALTAQLTAAAAAANTLNPLEPGVSFNKKLMDRFDFGEDSEHSEEPKKEIPTSQLSHV
SESVNNSIFHQIAEQLQQQNLEHLRQQLLEQQQPQKATPQDSQEGTFGSEHSASPSQGSS
QQHFLEPEANLDDSIDIQQQDMDIDEGQEGVEEEVFEQEAKKVAVRSRSRTHSRSRSRSP
RKRRSRSRSGSRKRKHRKRSRSRSRERKRKSSRSYSSERRAREREKERQKKGLPPIRSKT
LSVCSTTLWVGQVDKKATQQDLTNLFEEFGQIESINMIPPRGCAYVCMVHRQDSFRALQK
LSSGSYKIGSKVIKIAWALNKGVKTEYKQFWDVDLGVTYIPWEKVKVDDLEGFAEGGMID
QETVNTEWETVKSSEPVKETAPTTQSPPPVEKETVVTTQAEVFPPPVAMLQIPVAPAVPT
VSLVPPAFPVSMPVPPPGFSPIPPPPFLRASFNPSQPPPGFMPPPVPPPVVPPPTIPPVV
PTPLVQPPLSMTPEAVKEVGFGSLVLPGGPVAGSLAASTLPAGNVFNPAKQAEPEEKVPH
LIDHQISSGENTRSVIPNDIPSSPAILGQPPNMTSSAGILGVQRPNVSSNPEILGVRPSN
VSSSSGIIGVQPPNILNNSGILGIQPPSASSSSGLLGVLPPSIPNNSGLVGVQPPNIPNA
SGLLATQPPAGPQNLPPLSLSSQRMPVMPMLDLRPGLMPQAPGPRFPLLQPGIPPQRGIP
PPSILDSALHPPPRGPFPPGDIFSQPERPFLVPGRQSIDNINNPEKRIPLGNDNIQQEGD
RDYRFPPIETRESMSRPPPVDVREVVGRPVDPREGPGRPPLDGRDHFGRPPVDIRENLVR
PGMDHLGRRDHFGFNPEKPWGPRDFDEREHRVLPVFAGPKGLHEERARFRSGNYRFDPRS
GPWNRGFGQEVHRDFDDRRRHWERQRDRDDRDFDFCREINGNRLGRERIQNTWVPPPQAR
VFDFFEGATSQRKGDNVPQVNGENAERHAQPPPLPVQNDPELYEKLTSSSEINKEKSDTV
ADIESEPVVESTETEGT
NT seq
4014 nt
NT seq
+upstream
nt +downstream
nt
atgccgcagctgctgctgccagcgcttcctcctccgtcttcgcctggcgccgcgggttcc
tgccgcccgagcggcggggagtgcagtggccgccgcctcttccgccgccgggctcggggc
ctccgcaccgacaacatggaggctgtgaaaatcttcaacagcgaggattgtgcctctact
cctgcttgtacagactgcttttccagcagcatggacacaagaagcatattatattccctg
aatgactacaaaccaccgatttctaaagcaaaaatgactcaaattactaaggcagccatc
aaagctattaagttctataaacatgtggtacagagtgttgagaaattcattcagaatgta
aacccagaatacaaggtaccgtggacttatgtattgacttccaagtgtacgacaatgctc
ggacatcagggtggtcaagaaaggatgtctttaggcaacgcgagatttaggaataacatc
atttcaactttccagaatttatatcgttgctgccctggggatgacacgagtaaaatagta
agagtattaaacttatggcagaagaataatgtatttaagagtgagattattcagcctctt
ttggatatggcagcggggattccgccgccagttgtcaccccggtcctggccggcaccaca
gctgcgatgagcaacaccccaggaactcctgtgacacctgttactccagccaacgtggtc
caaggtttgcctgatccgtgggtatcccagatagcaaatacagacacgctcacagctgtg
gctcagatcttgcaaagtcctcaggccagccagtttcagcagttaatacagactttacag
atacaacagcagaagcctcagccgtccattctgcaggccctggatgctggtcttgttgtt
cagctgcaggctctgaccgcacagctcacggctgccgctgcggcagccaacaccctcaac
cccttggagccgggagtgtcttttaacaagaagttgatggataggtttgattttggggaa
gattctgaacatagtgaagaacccaaaaaagaaattccaacttctcagctttctcatgtt
tcagaatctgtgaacaattccatttttcatcagatagcagagcaactacagcagcaaaac
cttgaacatctcaggcagcagctcttggaacagcaacagcctcaaaaggcgacccctcag
gacagtcaagagggaaccttcgggtcagagcattccgcgtccccgtcgcaggggagcagt
cagcagcacttcctcgaaccggaagcaaatttggatgattccatagacattcaacagcag
gacatggatatagatgaagggcaagagggagtggaagaggaggtctttgaacaagaagca
aagaaagtggctgttcgctcgagatcaagaacacattcacgctctcgttcaagatcaccc
agaaaacggaggtctaggtcacgatctggttctcgaaagcggaagcaccgcaagcggtcg
cgctcgcgctcacgagagaggaagaggaagtcctcgcgctcgtactccagcgagaggcgg
gcccgggagcgcgagaaggagcgccagaagaaggggctgccgcccatcaggtccaaaacg
ctgagtgtctgcagtactactctctgggttggtcaggtggacaagaaggcgacacaacag
gatttaaccaacctttttgaagagttcggacagattgaatccattaatatgattcctccc
cggggctgcgcttatgtctgcatggttcatcgacaagattcatttcgggcgcttcagaaa
cttagttctgggtcgtacaaaattgggtccaaggtcattaagattgcttgggctttaaac
aagggtgtgaaaacagaatacaagcaattctgggatgtggatcttggagtgacatatata
ccgtgggaaaaagttaaagtggatgacttggaaggttttgcagaaggaggcatgattgac
caggagactgtcaatactgagtgggaaactgtgaaaagctcagagcctgtaaaagagacc
gccccgacaactcaaagcccgcctccagttgagaaggagacggtggtcacaacccaggca
gaggttttccctccacctgtcgctatgttacagattccagtagcaccagctgtgcctacc
gttagcttagtcccaccagcatttcctgtgtccatgccggttcctcctcctggcttcagt
ccaatccctccacctccttttctacgagcaagtttcaacccttcacaaccgcctcctggc
ttcatgccgccgccagtcccaccaccggtcgtaccgccacccactattcccccagtggta
cccacacctttagtgcagccaccattatccatgactccagaagctgtgaaggaggttgga
tttggtagcctagttttaccaggtggtcctgttgccggcagtcttgctgcttccactctg
ccagccggaaatgtttttaaccctgctaaacaagcagagcctgaagaaaaagtacctcat
cttatagaccaccagatttcttctggtgaaaacaccagatcagtgattccaaatgatatt
ccaagtagccctgcgattttagggcagccgccaaatatgacaagcagtgctggaattctt
ggagttcaaagaccaaatgtatcgagtaatcctgaaattcttggagtccggccatctaac
gtttccagtagttctgggattattggagtccagccaccaaatattctgaataactccgga
attttgggaatacagccgccaagtgcttcgagcagttccggactcttgggagtgctgccc
cccagcatccccaacaactctggacttgtcggcgtacagccaccgaatatccccaacgca
tctggacttttagcaacacagccaccagctgggcctcaaaacttaccccctttgagtctc
tctagtcaaaggatgcctgtaatgcccatgttagaccttcgtccaggactgatgccacag
gcacctggaccaagatttccattactacagcctggaattccgccccagcgaggaatccct
cccccatcgatacttgattcggctcttcatccaccaccccgtggtccttttcctccagga
gatatttttagtcagccagaaagaccttttctagttcctggaaggcaaagtatagacaat
attaataatccagaaaaaaggataccacttgggaatgataacattcaacaggaaggagat
agagattaccggtttcctcctatagaaaccagggaaagcatgagtagacctcccccggtg
gatgttagggaggtggttggacggcctgtagatccaagagaaggtcctggaagaccccca
ctagatggtagggatcattttggaagacctcctgtagatattagagaaaatcttgtgagg
ccgggtatggatcatcttggtcgaagagaccactttggctttaatccggagaaaccgtgg
gggccgagagattttgatgagagagagcatcgagtcctacctgtcttcgctgggccaaaa
ggcttacatgaagaaagagctcgattccggtccggaaactatcgttttgatcccagaagt
ggtccttggaacagaggatttgggcaggaagtgcacagggattttgatgaccgcagaaga
cactgggagaggcagcgggatagggatgacagagattttgacttctgcagagaaattaac
ggaaatcgtcttggaagagaacgaattcaaaacacctgggtcccccctcctcaagctcgg
gtctttgatttctttgaaggggccacttctcaacgaaaaggtgataatgtgcctcaggtt
aatggtgaaaatgctgagagacatgctcaaccaccacctttgccagtacagaatgatccc
gaactttatgagaaactgacatcttcgagtgaaataaacaaggagaagagtgacacagtt
gctgatatagaaagtgaaccagtggtagaaagcacagaaactgaggggacataa
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