Phyllostomus discolor (pale spear-nosed bat): 114494614
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Entry
114494614 CDS
T07739
Symbol
PRPF40A
Name
(RefSeq) pre-mRNA-processing factor 40 homolog A isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
pdic
Phyllostomus discolor (pale spear-nosed bat)
Pathway
pdic03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pdic00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114494614 (PRPF40A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pdic03041
]
114494614 (PRPF40A)
Spliceosome [BR:
pdic03041
]
Complex A
U1 snRNP components
U1 related factors
114494614 (PRPF40A)
Complex B
114494614 (PRPF40A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
FF_RHG35_4th
WW_2
DUF5803
Motif
Other DBs
NCBI-GeneID:
114494614
NCBI-ProteinID:
XP_028365667
UniProt:
A0A6J2LD67
LinkDB
All DBs
Position
4:67641311..67697123
Genome browser
AA seq
1039 aa
AA seq
DB search
MQATPSEAEAGGESPQSCVSAAHSDWTAGKPVSLLAPLIPPRSAGQPLTFSPSGRQPLRS
LLVGICSGSGRRRSSLSQTMRPGTGAERGGLMVSEMESHPPSRGPGDGERRLSGSSLCSS
SWVSADGFLRRRPSMGHPGMHYAPMGMHPMGQRANMPPVPHGMMPQMMPPMGGPPMGQMP
GMMSSVMPGMMMSHMSQASMQPALPPGVNNMDVAAGTSGAKSMWTEHKSPDGRTYYYNTE
TKQSTWEKPDDLKTPAEQLLSKCPWKEYKSDSGKPYYYNSQTKESRWAKPKELEDLEGYQ
NTIVAGSLITKSNLHAMIKAEESSKQEECTTASTAPVPTTEIPTTMSTMAAAEAAAAVVA
AAAAAAAAAAAANASASSSASNTVGGTVPVVPEPEVTSIVATVVDNENTVTISTEEQAQL
TSTPAIQDQSVEVSSNAGEDTSKETVADFTPKKEEEESQPAKKTYTWNTKEEAKQAFKEL
LKEKRVPSNASWEQAMKMIINDPRYSALAKLSEKKQAFNAYKVQTEKEEKEEARSKYKEA
KESFQRFLENHEKMTSTTRYKKAEQMFGEMEVWNAISERDRLEIYEDVLFFLSKKEKEQA
KQLRKRNWEALKNILDNMANVTYSTTWSEAQQYLMDNPTFAEDEELQNMDKEDALICFEE
HIRALEKEEEEEKQKSLLRERRRQRKNRESFQIFLDELHEHGQLHSMSSWMELYPTISSD
IRFTNMLGQPVFSLGSTALDLFKFYVEDLKARYHDEKKIIKDILKDKGFVVEVNTTFEDF
VAIISSTKRSTTLDAGNIKLAFNSLLEKAEAREREREKEEARKMKRKESAFKSMLKQATP
PIELDAVWEDIRERFVKEPAFEDITLESERKRIFKDFMHVLEHECQHHHSKNKKHSKKSK
KHHRKRSRSRSGSDSDDDDSHTKKKRQRSESRSASEHSSSAESERSYKKSKKHKKKSKKR
RHKSDSPESDAEREKDKKDKDRESEKDRTRQRSESKHKSPKKKTGKDSSGNWDTSGSELS
EGELEKRRRTLLEQLDDDQ
NT seq
3120 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcgacgccaagtgaggctgaggctgggggcgaatcgccgcagagctgcgtgtcg
gcagcgcactctgattggacagcggggaagcctgtcagcttattggccccgctgatcccg
ccccgtagtgccgggcagcctttaacctttagccccagcgggcgccagccactcagatcg
ctgcttgttggtatatgcagcggcagtggccgccggcggagcagtctgagccagacgatg
aggccagggacgggagccgagcgtggaggcctcatggtgagtgaaatggagagccatcct
ccctcgcggggtcctggggacggggagcggagattgtccggctcaagcctctgctccagc
tcttgggtctctgctgacggcttcctgaggagacggccctcgatggggcatcctggcatg
cattatgccccaatgggaatgcacccaatgggtcagagagcgaatatgcctcctgtacct
catggaatgatgccacaaatgatgcccccaatgggaggtccgccaatgggtcagatgcct
ggaatgatgtcttcagtaatgcctggaatgatgatgtctcatatgtctcaggcttccatg
cagcctgccttaccgccaggagtaaataatatggatgtagcagcaggtacatcaggcgca
aaatcaatgtggactgaacataagtcacctgatggaaggacttactactacaatactgaa
acaaaacagtctacttgggagaaaccagatgatctgaaaacacctgctgagcaactttta
tctaaatgcccctggaaagagtacaaatctgactctggaaagccatactattataattct
caaacaaaagaatcccgttgggccaaacctaaagaacttgaggatcttgaaggataccag
aataccattgttgctggaagtcttattacaaaatcaaacctgcatgcaatgatcaaagct
gaagaaagcagtaagcaagaagagtgcaccacagcatcaacagccccagttcctacaaca
gaaattccgaccacgatgagcaccatggctgctgcagaggcagcagctgctgttgttgca
gctgctgctgccgctgctgctgccgctgctgccgccaatgccagtgcctccagctctgct
tctaatactgtcggtggaactgttccagttgttcctgagcctgaagttacttcaattgtt
gctactgttgtagataatgaaaacacagtaacaatttcaactgaagaacaagcacaactt
actagtacccctgctattcaggatcaaagtgttgaagtgtccagtaatgctggagaagat
acgtctaaggaaactgtagctgattttactcccaaaaaagaagaggaagaaagccaacca
gcaaaaaaaacatatacttggaatacaaaggaggaggcaaagcaagcatttaaagaatta
ttgaaagaaaagcgggtaccatctaatgcttcatgggagcaagctatgaaaatgatcata
aacgatccacgatacagtgctttagcaaagttgagtgaaaaaaagcaggcgtttaatgcc
tataaagttcagacagagaaagaagaaaaagaagaagcaagatcaaagtacaaagaagct
aaggaatcttttcagcgttttcttgaaaatcatgagaagatgacatccacaaccagatac
aaaaaagcagagcaaatgtttggtgagatggaagtctggaatgcaatatcagaacgtgac
cgtcttgaaatctatgaagatgttttattctttctttcaaagaaagaaaaggaacaagca
aaacagttgcgaaaaagaaattgggaagccttaaaaaacatacttgacaacatggctaat
gtaacatactctactacttggtcagaagcccagcagtatctcatggataatccaactttt
gcagaagatgaagaattacagaacatggataaagaagatgcattaatttgctttgaagaa
catatccgggctttagaaaaggaagaagaagaagaaaaacaaaagagtttgctgagagaa
cggagacggcagcgtaaaaatagagaatcttttcagatatttttagatgaactgcatgaa
catggacaactgcattctatgtcatcttggatggaattgtatccaacaattagttctgac
attagattcactaatatgcttggtcagccggttttttcattaggatcaactgcacttgac
cttttcaagttttatgttgaggatcttaaagcacgctatcatgatgagaagaagataata
aaagacattctaaaggataaaggatttgtagttgaagtaaatactacttttgaagacttt
gtggcaataatcagttcaactaaaagatcaaccacattagatgctggaaatattaagttg
gcttttaatagtttactagaaaaggcagaagcccgtgaacgtgaaagagaaaaagaggag
gctcgaaaaatgaaacgaaaagaatctgcatttaagagtatgttgaaacaagctactcct
ccaatagaattggatgctgtctgggaagatatccgggagagatttgtaaaagagccagca
tttgaggacataactctagagtctgaaagaaaacgaatatttaaagattttatgcatgta
cttgagcatgaatgtcaacatcatcattcaaagaacaagaaacattctaaaaaatccaaa
aaacaccacaggaaacgttcccgctctagatcagggtcagattcagatgacgacgacagc
catacaaagaaaaaaagacagcgatcagagtctcgttctgcttcagaacattcttctagt
gctgagtctgagagaagttacaagaagtcaaaaaaacataagaagaaaagcaagaagagg
agacataaatcagactctccagagtcagatgctgagcgagagaaggataaaaaagacaaa
gaccgggaaagtgaaaaagacagaactagacaaagatctgaatcaaaacacaaatcgcct
aagaaaaagactggaaaggattcttctggtaattgggatacttctggcagtgaactgagt
gaaggggaattggaaaagcgcagaaggacccttttggagcaactggatgatgatcaataa
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