Phyllostomus discolor (pale spear-nosed bat): 114494670
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Entry
114494670 CDS
T07739
Symbol
CDC40
Name
(RefSeq) pre-mRNA-processing factor 17
KO
K12816
pre-mRNA-processing factor 17
Organism
pdic
Phyllostomus discolor (pale spear-nosed bat)
Pathway
pdic03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pdic00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114494670 (CDC40)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pdic03041
]
114494670 (CDC40)
Spliceosome [BR:
pdic03041
]
Complex C
Other components
Step II factors
114494670 (CDC40)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WDR55
EIF3I
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
Beta-prop_EIPR1
Beta-prop_TEP1_C
WD40_RFWD3
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_NWD2_C
WD_LRWD1
WDR54
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
114494670
NCBI-ProteinID:
XP_028365763
UniProt:
A0A6J2LI65
LinkDB
All DBs
Position
4:167765261..167818112
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AA seq
578 aa
AA seq
DB search
MSAAIASLAASYGSGSGSESDSDSEGGRCPLPTADSLMHLTKSPSDKPSLAVAVDSAPEV
AVKEDLETGVHLDPAVKEVQYNPTYETMFAPEFGPENPFRTQQMAAPRNMLSGYAEPAHI
NDFMFEQQRRTFATYGYALDPSLDNQVTTKYIGSVEEAEKNQGLTVFETGQKKTEKRKKF
KENDASNIDGFLGPWAKYVDEKDVAKPSEEEQKELDEITAKRQKKGKLEEEKPGEEKTIL
HVKEMYDYQGRSYLHIPQDVGVNLRSTVPPEKCYLPKKQIHVWSGHTKGVSAVRLFPLSG
HLLLSCSMDCKIKLWEVYGDRRCLRTFIGHSKAVRDICFNTAGTQFLSAAYDRYLKLWDT
ETGQCISRFTNRKVPYCVKFNPDEDKQNLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGAV
NTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQSM
DNQILIFGAQNRFRLNKKKIFKGHMVAGYACQVDFSPDMSYVISGDGNGKLNIWDWKTTK
LYSRFKAHDKVCIGAVWHPHETSKVITCGWDGLIKLWD
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgtcggctgcgattgcatctctggctgcttcgtatggttcgggttcggggtccgagtct
gactcggacagtgagggcggacggtgtccgctgccaaccgctgactccctcatgcacttg
actaaatcgccttctgacaagccctctctggcagtggcggtggactcggctccggaggtg
gcagttaaggaagatttggagaccggagttcaccttgaccctgctgtcaaagaggttcaa
tataatcctacttatgagaccatgtttgctcctgagtttggaccagaaaatccctttagg
acacagcaaatggctgcccctagaaatatgctttctggatatgctgaaccagctcatatc
aatgattttatgtttgaacagcaaagaagaacttttgccacatatggttatgcgttggac
ccttcattagataatcaagtgactactaagtatattggttctgtagaagaagctgagaaa
aatcaaggtttaactgtgtttgagactggtcagaagaaaacagaaaagagaaaaaagttc
aaagaaaatgatgcatctaatattgatggtttcctgggaccatgggcaaaatatgtggat
gaaaaagatgtagccaaaccttccgaagaagaacaaaaagaattggatgaaatcacagca
aagaggcagaaaaaaggcaaactggaagaagagaaacctggggaggaaaagacaatctta
catgttaaagaaatgtatgactaccaaggccggtcttacctgcacataccccaggatgtt
ggtgttaatctgcggtcaaccgtgccacctgagaaatgttatcttcctaaaaaacaaatt
cacgtgtggtctggacacacaaagggcgtcagtgcggtcaggctgttccctctttccggc
catttactgctgtcttgttccatggactgtaaaattaagctgtgggaagtttatggagac
aggcgttgtttgcgaacatttattggtcacagtaaagctgtcagggacatctgctttaat
actgcaggaacgcagttcctcagcgcagcttacgacaggtatcttaagctctgggacact
gaaacaggacagtgtatatcaagattcacaaaccgaaaagtaccctattgtgtcaaattt
aatcctgatgaagataagcaaaatctctttgtggccgggatgtctgataaaaagattgta
caatgggatattcgcagtggagaaattgtgcaggaatatgaccggcacttgggagctgtc
aacaccattgtttttgttgatgagaacaggagatttgtgagcacatctgatgataagagc
ctcagagtttgggaatgggacatccctgtggatttcaagtatatagcagaacccagtatg
cactctatgcctgcagtgactttgtctccaaacgggaaatggctagcatgccaatcaatg
gacaaccaaatcttaatttttggagcacaaaacagatttagattaaataagaaaaaaatt
tttaagggccatatggtagcaggctatgcttgtcaggtggacttttcaccagacatgagc
tatgtgatttcaggagatggaaatggaaaattaaacatctgggactggaagaccacaaaa
ctctacagtcggtttaaagctcatgacaaagtgtgcataggtgccgtgtggcaccctcat
gagacatctaaagtcataacctgcggttgggatggcctcattaaactgtgggattga
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