Phyllostomus discolor (pale spear-nosed bat): 114495395
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Entry
114495395 CDS
T07739
Symbol
PNLDC1
Name
(RefSeq) poly(A)-specific ribonuclease PNLDC1 isoform X2
KO
K01148
poly(A)-specific ribonuclease [EC:
3.1.13.4
]
Organism
pdic
Phyllostomus discolor (pale spear-nosed bat)
Pathway
pdic03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pdic00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
114495395 (PNLDC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdic03019
]
114495395 (PNLDC1)
Enzymes [BR:
pdic01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
114495395 (PNLDC1)
Messenger RNA biogenesis [BR:
pdic03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
114495395 (PNLDC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
114495395
NCBI-ProteinID:
XP_028366473
UniProt:
A0A6J2LK72
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All DBs
Position
4:204790694..204807883
Genome browser
AA seq
531 aa
AA seq
DB search
MDVGADEFEQRLPRLQELVLGADFVGLDIEFTGLRTSLSGPQQISLFDLPSEWYLKTRQS
ARQFTICQIGLSVFTSVEGEPNKYVAHSYNFFLFPTTFGILDSEFSFQASSVQFLNQYGF
DYNKFLKNGIPYMNEEQEKKIKHSILTGNWRVRSSLDKDQIKVVIDEVTRWLALAEEGDC
MTLPGITGFQAFTVQLVLKQALPGIQAVRTDHGVTVKKAGKQHRWYLEGASCDGEGRWKE
KLLLSARGFSVFFQMLVKAQKPLVGHNMMMDLLHLHEKFFRPLPESYHQFKRNIHRLFPV
LIDTKNVTKDIWKELNFPRVSNLSEVYEVLNSDLNPTKNSGPVIIHASECEKYAETKYPH
EAAYDAFLSGSVLLKVAHLLLWRLHSAGPAPEPSFALCLEALAPYLNQVNLIRAGVPKIN
FSGPDYPSVRPPVLLLSVSRWPGVSEEQVYREFQNLCKFDVRRLTRNQFLLLTNKFKDAR
SVLKEHRGHPTLRVALYRHWRHSPDVSCLLQVCGVVTTWALLAFLLGRPSP
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atggacgtgggcgccgacgagttcgagcagcgcctccctcggctgcaggagcttgtcctg
ggcgcggacttcgtgggtctggacatagagttcacgggcctccgcaccagcctgtctggg
cctcagcagatcagccttttcgacttgccgtcggagtggtatctaaagacccggcagagt
gctcggcagttcacaatctgtcagattggactgtctgtgtttaccagcgtcgaaggagag
ccaaacaagtacgtagcccattcatataacttctttctcttcccgacaacgtttgggatt
ttggactcggaattctctttccaggcttctagtgttcagtttttgaaccagtacggcttc
gactacaacaagtttctcaaaaacggaatcccctacatgaacgaagaacaggagaagaaa
atcaagcacagcatcctgaccgggaactggagagttcgcagttccctggataaggaccaa
atcaaggtggtgatcgatgaggtgacgcggtggctggccctggcagaggaaggcgactgc
atgactctccctggcatcactggcttccaggccttcacggtccagctggtgctgaagcag
gccctccctggcatccaggcagtgcggacggaccatggggtgacagtgaagaaggcgggc
aagcagcatcgctggtacctcgagggcgcctcctgtgacggagagggccgttggaaggag
aagctgcttctgtccgccaggggcttctccgtgtttttccagatgctggtgaaagcccag
aagcccctggtggggcacaatatgatgatggacctgctgcatctccacgagaagttcttc
aggcccctcccagagagctaccatcagtttaagcggaacatccaccgcctgtttccggtc
ctcatcgacaccaaaaacgtgaccaaggacatatggaaggaactgaatttccccagggtt
tcaaatctttccgaagtttacgaagtcctgaacagcgacttgaatcccaccaagaattct
gggccagtgatcattcacgccagcgagtgcgaaaaatacgcagagacaaagtacccgcac
gaggcagcctacgacgccttcctcagcggctcagtccttttgaaagtggcgcacctgctc
ctgtggagactgcacagtgctggccccgcacccgagccctccttcgccctgtgcctcgag
gcgctggccccctacctgaaccaggtgaacctgatccgcgccggggtcccgaagatcaac
ttttctggccccgattaccccagtgtccgaccccccgtcctcctcctcagcgtcagcagg
tggcccggggtcagcgaggagcaagtctaccgtgagttccagaacctctgcaagttcgac
gtccggcgactcacgcggaaccagttcctgctcctgaccaacaagttcaaggatgcccgg
agcgtcctcaaggagcacaggggccaccccaccctgcgggtggccctctatcggcactgg
agacactcgccggacgtgagctgcctgctgcaagtctgtggcgtcgtgaccacctgggcc
ctgctcgcgttcctcctgggaagacccagcccctga
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