Phyllostomus discolor (pale spear-nosed bat): 114496022
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Entry
114496022 CDS
T07739
Symbol
NCBP1
Name
(RefSeq) nuclear cap-binding protein subunit 1 isoform X1
KO
K12882
nuclear cap-binding protein subunit 1
Organism
pdic
Phyllostomus discolor (pale spear-nosed bat)
Pathway
pdic03013
Nucleocytoplasmic transport
pdic03015
mRNA surveillance pathway
pdic03040
Spliceosome
pdic05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
pdic00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114496022 (NCBP1)
09122 Translation
03013 Nucleocytoplasmic transport
114496022 (NCBP1)
03015 mRNA surveillance pathway
114496022 (NCBP1)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
114496022 (NCBP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdic03019
]
114496022 (NCBP1)
03041 Spliceosome [BR:
pdic03041
]
114496022 (NCBP1)
Messenger RNA biogenesis [BR:
pdic03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
114496022 (NCBP1)
Spliceosome [BR:
pdic03041
]
Common components
Common spliceosomal components
Cap binding complex
114496022 (NCBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G_like_2
MIF4G
MIF4G_like
DUF1690
Cob_adeno_trans
DUF2524
Motif
Other DBs
NCBI-GeneID:
114496022
NCBI-ProteinID:
XP_028367034
UniProt:
A0A6J2LJB0
LinkDB
All DBs
Position
3:186008959..186046048
Genome browser
AA seq
790 aa
AA seq
DB search
MSRRRHSDENDGGQPHKRRKTSDANETEDHLESLICKVGEKSACSLESNLEGLAGVLEAD
LPNYKSKILRLLCTVARLLPEKLTIYTTLVGLLNARNYNFGGEFVEAMIRQLKESLKANN
YNEAVYLVRFLSDLVNCHVIAAPSMVAMFENFVSVTQEEDVPQVRRDWYVYAFLSSLPWV
GKELYEKKDAEMDRIFANTESYLKRRQKTHVPMLQVWTAEKPHPQEEYLDCLWAQIQKLK
KDRWQERHILRPYLAFDSILCEALQHNLPPFTPPPHTEDSVYPMPRVIFRMFDYTDDPEG
PVMPGSHSVERFVIEENLHCIIKSHWKERKTCAAQLVSYPGKNKIPLNYHIVEVIFAELF
QLPAPPHIEVMYTTLLIELCKLQPGSLPQVLAQATEMLYMRLDTMSTTCVDRFINWFSHH
LSNFQFRWSWEDWSDCLTQDPESPKPKFVREVLEKCMRLSYHQRILDIVPPTFSALCPAN
PTCIYKYGDESSNSLPGHSVALCLAVAFKSKATNDEIFSILKDVPNPNQDDDDDEGFSFN
PLKIEVFVQTLLHLAAKSFSHSFSALAKFHEVFKTLAESDEGKLHVLRVMFEVWRNHPQM
IAVLVDKMIRTQIVDCAAVANWIFSSELSRDFTRLFVWEILHSTIRKMNKHVLKIQKELE
EAKEKLARQHKRRSDDDDRSSDRKDGALEEQIERLQEKVESAQSEQKNLFLVIFQRFIMI
LTEHLVRCETDGTSVLTPWYKNCIERLQQIFLQHHQIIQQYMVTLENLLFTAELDPHILA
VFQQFCALQA
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcggcggaggcacagcgacgagaatgatgggggacagcctcacaaaaggagaaag
acctctgatgcaaatgaaactgaagaccatttggaatctttaatatgcaaagtaggagaa
aagagtgcctgctctttggagagcaacctagaaggcttggctggcgttttggaagctgac
cttcctaactacaagagcaagatcttaaggctcctttgtacagttgcacgtctgttaccc
gagaagttgacaatttatacaacgttagttggactgctgaatgccaggaattacaacttc
ggtggagaattcgtagaagccatgattcgtcaacttaaagaatctttgaaagcaaataat
tataatgaagctgtatatttggttcgttttttatctgatcttgtgaattgtcacgtcatt
gcagccccgtcaatggttgctatgtttgaaaattttgtaagtgtaactcaggaagaggat
gtacctcaggtgcgacgggattggtacgtgtacgcgtttttgtcatctttgccctgggtc
ggaaaggagttgtatgagaagaaggatgcagagatggaccgcatctttgccaacacggaa
agctatcttaagagacgtcaaaagactcatgtgcccatgttacaagtatggactgctgag
aaaccacatccacaggaggagtatttagattgcctgtgggcccagattcagaaattgaaa
aaggatcgctggcaggagcggcacatcctaagaccttatcttgcctttgacagcatcctg
tgtgaagcactccagcacaatttgcctccttttacacctcctcctcacaccgaggactca
gtgtacccaatgccaagggtcatcttcagaatgtttgattacacagacgaccccgagggt
cctgtaatgccagggagtcattcagtggagagatttgtaatagaggagaatcttcactgc
atcattaagtctcactggaaagaaagaaagacttgtgctgcgcagctggtgagctaccca
gggaagaacaagatccccttgaactaccacatagttgaggtgatctttgcagagctgttt
cagcttccagcaccacctcacatcgaagtgatgtacacgacgctgctcatcgaactgtgc
aaactgcagcctggctctctgccccaagtccttgcacaggcgaccgaaatgctgtacatg
cgtttggacacgatgagcaccacgtgtgtagacaggtttattaattggttttcccatcat
ctaagtaacttccagttccgttggagctgggaagattggtcagattgtcttactcaagat
cctgaaagtcccaaaccaaagtttgtacgagaagttctagaaaaatgtatgcggttgtcc
taccatcagcggatattagatattgttcctcccaccttctcagctctgtgtcctgcaaac
cccacctgcatttacaagtatggagatgaaagtagcaattctcttcccggacattcagtc
gccctctgtttagctgttgcctttaaaagcaaagccaccaatgatgagatcttcagcatc
ctgaaagatgtccccaaccccaaccaggatgacgatgacgatgaagggttcagtttcaat
ccactgaaaatagaggtcttcgtacagactctgctgcacttggcagccaaatcgttcagc
cactccttcagcgccctcgcaaagtttcatgaagtcttcaaaaccctggctgaaagcgat
gaaggaaagttgcacgttctgagggtcatgttcgaggtctggaggaaccacccgcagatg
attgctgtactggtagacaagatgattcgtactcagattgtcgactgtgcggcagtagca
aattggatcttctcttcagaactgtctcgtgactttactaggttgtttgtttgggaaatt
ttgcactccacaattcgtaagatgaacaaacatgttctaaagatccagaaagagctggaa
gaagctaaagaaaaactcgcaaggcaacacaaacggagaagtgacgacgacgacagaagc
agtgacaggaaagacggggctctggaggagcaaatagaaagactgcaggaaaaagtggag
tctgcccagagtgaacaaaagaacctcttcctcgtcatatttcagcggttcatcatgatc
ctgaccgagcacttagtacgctgtgagactgatgggaccagcgtgttaactccgtggtat
aagaactgtatagagaggcttcagcagatcttcttacagcaccaccaaatcatccagcag
tacatggtgaccctggagaacctgctcttcactgctgaactagaccctcacatcctggcc
gtgttccagcagttctgtgccctgcaggcctaa
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