Phyllostomus discolor (pale spear-nosed bat): 114496050
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Entry
114496050 CDS
T07739
Symbol
NUP188
Name
(RefSeq) nucleoporin NUP188 homolog
KO
K14311
nuclear pore complex protein Nup188
Organism
pdic
Phyllostomus discolor (pale spear-nosed bat)
Pathway
pdic03013
Nucleocytoplasmic transport
pdic05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
pdic00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
114496050 (NUP188)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
114496050 (NUP188)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdic03019
]
114496050 (NUP188)
Messenger RNA biogenesis [BR:
pdic03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
114496050 (NUP188)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup188_N-subdom_III
Nup188_N
Nup192
Nup188_SH3-like
HEAT_SCC3-SA
DUF4912
Motif
Other DBs
NCBI-GeneID:
114496050
NCBI-ProteinID:
XP_028367093
UniProt:
A0A6J2LM19
LinkDB
All DBs
Position
3:209635635..209690756
Genome browser
AA seq
1752 aa
AA seq
DB search
MAAAAGEPCVRSSRELWTILLGRSALRELNHIETELNKHWQRLLEGLSYYKPPSPHSAEK
VKANKDVVSPLKELGLRISKFLGLDEEQSVQLLHCYLQEDYRGTRDSIKTVLQDERQSQA
LILKIADYYYEERTCILRCVLHLLTYFQDERHPYKVEYADCVDKLEKELVIKYRQQFEEL
YKTEAPTWETHGNLMTERQVSRWFVQCLREQSMLLEIIFLYYAYFEMAPSDLLVLTKMFK
EQGFGSRQTNRHLVDETMDPFVDRIGYFSALILVEGMDIESLHKCALDDRRELHQFAQDG
LICQDMDRLMLTFGDIPHHAPVLLAWALLRHTLSPEETSSVVRKIGGTAIQLNVFQYLTR
LLRSLAVGGNDCTTSTACMCVYGLLSFALTSLELHTLGNQQDVIDTACEVLADPSLPELF
WGTEPTSGLGIILDSVCGMFPHLLSPLLQLLRALVSGKSTAKKVYSFLDKMSFYNELYKH
KPHDVISHEDGTLWRRQTPKLLYPLGGQTNLRIPQGTVGQVMLDDRAYLVRWEYSYSSWT
LFTCEIEMLLHVVSTADVIQHCQRVKPIIDLVHKVISTDLSIADCLLPITSRIYMLLQRL
TTVISPPVDVIASCVNCLTVLAARNPAKVWTDLRHTGFLPFVAQQVSNMSQMISAEGMNA
GGYGTLLMNCEQPQGEYGVTVAFLRLITTLVKGQLGSTQSQGLVPCVMFVLKEMLPSYHK
WRYNSHGVREQIGCLILELIHAILNLCHETDLHSSNAPSLQSLCICSLAHTEAGQTVISI
MGIGVDTIDMVMAAQPRSDGAEGQGQGQLLIKTVKLAFSVTNNVIRLKPPSNVVSPLEQA
LTQHGAHGNNLIAVLAKYIYHKHDPALPRLAIQLLKRLATVAPMSVYACLGNDAAAIRDA
FLTRLQSRIEDMRIKVMILEFLTVAVETQPGLIELFLNLEVKDGSDGSKEFSLGEWSCLH
VVLDLIDSQQQDRYWCPPLLHRAAIAFLHALWQDRRDSAMLVLRTKPKFWENLTSPLFGT
LSPPSETSEPSILETCALIMKIICLEIYYVVKGSLDQSLKDTLKKFSSERRFAYWSGYVR
SLAVHTADTEGSSCTSLVEYQMLVSAWRMLLIIATSHAEIVHLTDSAVRRQLFLDVLDGT
KALLLVPASVNCLRLGSMMCTLLLILLRQWKRELGPVDEILAPLTEILEGVLQADQRLME
KTKAKVFSAFITVLQMKEMKVCDIPQYSQLVLNVCETLQEEVIALFDQTRHSLASGSAAE
DKDSMDTDDCSRPRHKDQRDGVCVLGLHLAKELCEVDEDGDSWLQVTRRLPILPTLFTTL
EVSLRMKQNLHFTEAAFHLLLTLARTQQGATAVAGAGITQSICLPLLSVYQLSTNGTVQT
PSASRKSLDAPSWPGVYRLSISLMERLLKTLRYNFLTEALDFVGVHQERTLQCLSAVRTV
QSLACLEEADHTVGFVLQLSSFMKEWHFHLPQLLRDVQVNLGYLCQACTSLLHSRKMLQH
YLQNKNGDGVPSAVAPRVQRPPTAAPAAPSSSSSSKQPTADTEASEQRALHVVQYGLLKI
LSRTLAALRHFTPDVCQILLDQSLDLAEYNFLFALSFTTPTFDSEVAPSFGTLLATVNVA
LNMLGELDKKKEPLTQAVGLSTQAEGTKTLKSLLMFTMENCFYLLISQAMRYLRDPAVHP
RDKQRMKQELSSELSTLLSSLSRYFRRGAPSSPAAGILLSPQGKSTSLPKAGPEGQEPLI
QLVQAFVRHVQR
NT seq
5259 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggccgccggcgagccgtgtgtgaggagcagcagagaactgtggaccattctg
cttggaaggtcagctctgagagaactgaatcatattgaaacggaactgaataaacattgg
cagcggcttttggaagggctttcttactataaacctcccagtccacattcagctgaaaaa
gtgaaagctaataaagatgtagtttcaccactgaaagaactgggcttaagaatcagcaag
tttttgggtcttgatgaggagcagagtgtgcagttactccattgttaccttcaagaggat
tacagaggtacccgggactcaataaagacagtactacaagacgagagacagagccaggcc
ttaatcctgaagattgcagattattactatgaagaaagaacatgtattcttcgttgtgtc
ttacaccttctcacttatttccaagatgaaagacacccctataaggttgaatatgcagac
tgtgtcgataaactggagaaggagttagttataaaatatagacagcagtttgaagagctt
tataaaactgaagcaccaacatgggagacacatggaaacctcatgactgagcgccaggtg
tctcgctggtttgtccagtgccttcgggaacagtccatgctgctagaaattattttcctt
tattatgcatattttgaaatggcaccaagtgacctgttggtattaaccaagatgtttaaa
gagcaaggatttggtagtaggcagaccaacaggcacctggtggatgagactatggatcct
tttgtggatcggattggctacttcagcgccctcatcctggtggaaggcatggacatcgag
tccttgcacaagtgcgcgctggacgacagaagagaactgcaccagtttgcccaggatggg
cttatctgtcaggatatggaccgtttgatgttgacctttggggacattccacatcatgcc
ccagtgcttttggcctgggctctcctccgccacaccctgagtccagaagagaccagcagt
gttgtccggaaaattggtggcacggccatccagctgaatgtgtttcagtacttgacccga
ctgctccgctcactggctgttggaggaaatgattgcaccaccagcaccgcgtgcatgtgt
gtctacgggctcctgtctttcgctctgacctcgctggagctgcacacactgggcaatcag
caggatgtgatcgacacagcgtgtgaagtcttggcagacccttcgctcccagagctattc
tggggaacagagccaacctctggtctcgggatcattctggacagtgtgtgtggaatgttt
ccccatctcctctccccgctcctgcagttgctgcgagccctcgtgtcagggaagtctact
gccaaaaaggtgtacagtttcttggataagatgtctttctacaatgagctttataagcac
aagccccacgatgtgatctcccacgaagatggaaccctgtggcggaggcagacacccaaa
ctcctttacccgcttgggggtcagaccaatcttcgcatacctcaaggcactgtgggccaa
gtgatgctggacgacagggcctacctggtgcgctgggagtactcgtacagcagctggacc
ctcttcacctgtgagattgagatgctgcttcatgtcgtctccactgcagatgtgattcag
cactgccagcgggtcaaacccatcattgatctggtccataaggtcatcagtacggatctg
tccatagcagactgtctcctgcccatcacgtctcgcatctacatgctgctgcagcggtta
acgacggtgatctccccgcctgtggatgtcattgcttcctgtgtcaattgcttgactgtg
ttggctgcccggaacccagcaaaggtctggactgatcttcgtcacacgggctttttacca
ttcgtggcccagcaggtctccaacatgagtcagatgattagtgcggagggaatgaatgcc
ggagggtacggaacgctcctgatgaactgtgagcagccccagggcgagtacggggtcact
gttgcctttctgcggttgatcaccacccttgtcaagggacagcttggtagtacacagagc
caagggctggtgccctgcgtcatgtttgtgctaaaggagatgcttcccagctaccacaag
tggcgctacaactcccacggtgtgagagaacaaattggttgcctgatcctggagctgatc
cacgcgatactgaacctgtgccatgagacagacctgcacagcagcaacgcccccagcctg
cagtccctctgcatctgcagcctggcccatacagaagcaggacagaccgttatcagtatc
atgggcatcggcgtggacaccatcgacatggtgatggctgctcagccccgcagtgatggg
gcagagggccaggggcagggccagctgctgatcaagacagtgaaactggcattctccgtc
accaacaatgtcattcggctgaaacctccttccaatgtggtgtctcccttggaacaggct
ctcacacagcacggtgcccatgggaacaacctcattgctgttcttgccaaatacatttac
cacaaacatgaccctgctctgcctcgtctggccatccagctgctgaaacgtctggccacg
gtggccccgatgtcagtgtatgcctgcttgggcaatgacgcggctgccattcgcgacgcc
ttcctgacccggttgcagagcagaatcgaggacatgcgcatcaaagtcatgatcctggag
tttctcaccgttgcagtggagacgcagccgggcctcatcgaactgtttctgaatcttgaa
gtgaaggacggcagtgacggctccaaggaattcagccttggggagtggagctgtctccac
gtggtgctggatctcatcgactcccagcagcaggatcgctactggtgcccgcccctgctg
caccgtgcggccatcgccttcctgcacgccctgtggcaggaccggcgggacagtgccatg
ctggtgctcaggaccaaacccaagttctgggagaatttaaccagtcccctgtttggaacg
ctttcccctccctcagagacctccgagcccagcatcctggagacctgtgccctgatcatg
aagataatatgcttggagatatactatgtagtcaagggctcactagaccagtcattaaaa
gatacactcaagaagttttccagtgagagacgcttcgcctactggtcagggtacgtcagg
tctctggcggttcacacggccgacacagagggcagcagctgcacctccttggtcgagtat
cagatgctggtctccgcctggaggatgcttctcatcatcgccaccagtcacgcagagata
gtgcatctgaccgactctgcggtgcgtcgtcagctctttcttgatgtgctcgatggaacc
aaagcgctactcctggtcccggcctcagtaaactgcctccgcctcggctccatgatgtgc
acgctgctgctcatcctcctgcggcagtggaagagagagttaggtcctgtggatgagatc
cttgcgcccttgacagagatcctggagggagtgctgcaggcagaccagcggctcatggag
aagaccaaggccaaggtgttctctgcattcatcactgtgctgcagatgaaggagatgaaa
gtgtgtgacatcccccagtactcccagctggtgcttaacgtctgtgagaccctccaagaa
gaggtgatcgcactcttcgaccagacccgccacagtctggcctcaggcagcgccgcggag
gacaaggacagcatggacaccgacgactgctcgcggccccggcacaaggaccagcgcgac
ggggtgtgtgtcctgggcctgcacctggccaaggagctgtgtgaggtggatgaggatggc
gactcatggctgcaggtgacccgcaggctccccatcctgccgaccctgttcacgaccctg
gaggtgagcctgcgcatgaagcagaacctgcatttcaccgaggcggcgtttcacctgctc
ctcaccctggctcgcacccagcagggagccacagcagtggccggagccggcatcactcag
agcatctgtttgcccctcctgagtgtgtaccagctcagcaccaatgggacggtgcagaca
cccagcgcctctcgaaagtccctggatgccccctcgtggccaggggtctaccgcctgtcc
atatctctgatggagcggctcctcaaaaccctgcgctacaacttcctgacagaggccttg
gacttcgtgggtgttcaccaggagcggaccttacagtgcctcagcgcggtgcggacggtg
cagagcctggcctgcctggaggaggcggaccacactgtgggcttcgtcctgcagctctcc
agcttcatgaaggagtggcacttccacctgccgcagctcctgcgggacgtgcaggtcaac
ttgggttacctgtgccaggcctgcacctccctcctgcacagccggaagatgctgcagcac
tacctgcagaacaagaatggggatggcgtcccctcagctgttgccccccgagttcagcgg
ccacccacagctgcccctgctgccccctcctcctcctcctcctccaagcagcccactgcg
gacactgaggcttcggagcagcgagccctacacgtggtccagtatggcctcctcaagatc
ctcagcaggaccctggcggccctgcgccacttcaccccggacgtctgccagatcctgctg
gaccagtccctggaccttgccgaatacaatttcctgtttgccctgagcttcaccactccc
acctttgactcggaagtggccccttccttcgggacccttctggccacagtgaatgtggcc
ctaaacatgctcggagagctggataagaaaaaggagcctcttacgcaggctgtggggctc
agcacacaggcagaagggaccaaaacactgaagtccctcctgatgtttaccatggagaac
tgcttctacctgctcatctcccaggcgatgcgctaccttagggacccggccgtgcaccct
cgggataaacagcggatgaagcaggagctcagctcagagttgagcacgctgctctccagc
ctctcgcgctacttccgcaggggagcccccagctcccccgccgccggcatcctcctctcg
cctcagggcaagtccacctccctccccaaggccggccccgagggtcaagagcctctgatc
cagctggtgcaggccttcgtccggcacgtgcagagatag
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integrated database retrieval system
