Phyllostomus discolor (pale spear-nosed bat): 114496383
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Entry
114496383 CDS
T07739
Symbol
PDCD11
Name
(RefSeq) protein RRP5 homolog isoform X3
KO
K14792
rRNA biogenesis protein RRP5
Organism
pdic
Phyllostomus discolor (pale spear-nosed bat)
Brite
KEGG Orthology (KO) [BR:
pdic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pdic03009
]
114496383 (PDCD11)
Ribosome biogenesis [BR:
pdic03009
]
Eukaryotic type
90S particles
Other 90S particles
114496383 (PDCD11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1_RRP5
S1
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
Spt6_S1
OB_RRP5_4th
HAT_PRP39_C
OB_RRP5
HAT_Syf1_CNRKL1_C
Suf
TPR_14
TPR_19
TPR_CcmH_CycH
ARM_TT21
ARM_TT21_N
UTP6_C
ARM_TT21_5th
TPR_15
TPR_16
TPR_2
DUF7017
TPR_12
ARM_TT21_C
Motif
Other DBs
NCBI-GeneID:
114496383
NCBI-ProteinID:
XP_028367529
UniProt:
A0A6J2LKP4
LinkDB
All DBs
Position
5:155299323..155339033
Genome browser
AA seq
1876 aa
AA seq
DB search
MASMEESFPRGGTRKTHKSEKAFEHSVEQDNLFDISAEEEPTKRKKSQTGPAKSKKLKIE
KRESSKAVKEKFEILSIESLCEGMRILGCVKEVNELELVISLPNGLQGFVQVTEICDAYT
KKLNEQVAQEEPLKDLASLPELFSPGMLVRCVVSSLGITEKGKKSVKLSLNPKNVNKVLS
AEALKPGMLLTGTVSSREDHGYLVDVGVAGARAFLPLQKAQDYVRQKNKGAELMVGQYLN
CVIEEVRGNGGVVRLSVGHSEVSAAIATEEQNWTLNNLLPGLVVKAQVQKVTPLGLTLNF
LSFFTGLVDFMHLDPKKAGTYSPNQAVRACVLCVHPRTRAVRLSLRPVFLQPGRPLTRLS
CQHLGAVLDDIPVQGFFSKAGATFRLKDGSLAYARLSHLSDSKSAFSPEAFKPGSTHKCR
IINYSQMDELALLSLRTSVIEAQYLSFHDIKPGALVKGTVLTIKPYGMLVKVSEQIRGLV
PPVHLADILMKNPEKKYRVGDEVTCRVLLCDPEAKKLMMTLKKTLVESKLPAITCYADAK
PGLQTHGFILRVKDYGCIVKFYNDVQGLVPKHELSAEYVPDPERVFYAGQVVKVAVLNCE
PSKERMLLSFKLLSDPKKEHAGRGQKKGKTINVGQLVDVKVLEKTKDGLEVAVLPHNIPA
FLPTSHLSDHVANGPLLYHWLQAGDTLHRVLCLSQSEGHVLLCRKPALVSTVEGGQDPKS
FSEIQPGMLLMGFVRSIKDYGVFVQFPSGLSGLAPKAIMSDKFVTSTSDHFVEGQTVVAK
VTNVDEEKQRMLLSLRLSDCSLGDRATTSLLLLSQCLEERQGVRSLMSNRDSVLIQTLAE
MIPGMVLDLEVQEVLEDGSVVFSEGPVPGLVLRASRYHRAGQEVEAGQKKKAVILHVDMV
KLEVHVSLCHDLVNRKAKKLKKGSEHQAVVQYLEESFAIASLVETGDLAAFSLTTHLNDT
FRFDSEKLQVGQGVSLTIKTTEPGMTGLLLAVEGPAAKRTMRQTRKDSETVDEDDEGDPA
MVAGTKKEHALSIGDMVTGTVKSIKPTHVVVTLENGTIGCIHASHILDDVPVGTSPTAKL
KVGKKVTARVIGGRDMKTFKFLPISHPRFIRTVPELSIRPSELAKDGHTALNTHSVSPSE
KIKQYQAGQTVTCFLKKYNVVKKWLEVEIAPDIRGRIPLLLTSLSFKVLKHPDKKFRIGQ
ALKATVVGPDSSKAFLCLSLIGPHKLEEGEVAMGRVVKVTPHEGLTVSFPFGRMGSVGLF
HVSDSYSETPLEDFTPQKIVRCYVLSTADEVLTLSLRSSRTNPETKSKITDPEINSIRDV
QEGQLLRGYVQSVQPHGVLLGLGPSVVGVARYPHVSQCGLSKKALCDRHLPEGKLLTAKV
LSVNQQKNLVELSFLPSDTGKPDVFPTPPGQPLPAQGERQGEAEERDHRGEGEKERKRKN
QERKEKREQKWQEEAQMPSKEKKEPQQPQAKKQGKRLRLEPGSEQEGVSKKQKKAAPSEE
DDSGVEVYYREGEEEIEERSVLPKEKQTRPAELPRLQLSSSFVWDVGLDSLTPALPPQGE
SSDSEEDEKPQQATKKKSKKERELEKQKAEKELSRIEEALMDPGRQPESADDFDRLVLSS
PNSSILWLQYMAFHLQATEIEKARAVAERALKTISFREEQEKLNVWVALLNLENMYGSQE
SLTKVFERAVQYNEPLKVFLQLADIYTKSQKFQEAGELYNRMLKRFRQEKAVWIKYGAFL
LRRGQAGASHRAMQRALECLPKKEHVDVISKFAQLEFQLGDAERAKAIFENTLSTYPKRT
DVWSVYIDMTIKHGSQKEVRDIFERVIHLSLAPKRMKFFFKRYLDYEKQHGTEKDVQAVK
AKALDYVEAKSSVLED
NT seq
5631 nt
NT seq
+upstream
nt +downstream
nt
atggcatccatggaagaaagcttcccccgtgggggcacaagaaagacccacaaatcagag
aaagcttttgagcattcagttgaacaagacaatttatttgatatttctgctgaagaggaa
cccaccaaaaggaaaaagagccagacagggccagcaaaatcaaaaaagttgaaaatcgaa
aagagggaaagcagcaaggctgtaaaagaaaagtttgaaatccttagtattgagtccctg
tgtgagggaatgcggattttgggttgtgtgaaagaggtaaatgaactggaactggtgatt
agtctccccaatggcctccaggggtttgtgcaagtaactgaaatctgtgatgcttacacc
aaaaagctcaatgagcaggtggcgcaagaagaacctctgaaggacctggctagcttgcct
gagctcttctctcctgggatgctggtgagatgtgtggtgagcagtctgggcatcacagag
aaaggcaaaaagagtgtcaagctatctctgaaccccaaaaatgtcaacaaagtgctgagc
gcagaagccctgaagcccggcatgctgctcacaggcactgtgtccagtcgggaagaccat
ggctacctagtggacgttggtgttgctggggccagagctttcctgccactgcagaaagcc
caggattatgtcagacagaagaacaaaggcgctgagctgatggtgggtcagtacctgaac
tgcgtcattgaagaggtgagaggcaacggaggagttgttcgtctgtctgtcggtcattca
gaagtttctgctgccattgctactgaggagcaaaactggacccttaataacttgctaccc
ggactggtggtcaaagcccaggtacagaaggtgacgccactgggccttacactaaacttc
ctctcattcttcactggcctggttgacttcatgcacttggatcccaagaaagctggaaca
tactccccaaatcaagcagtgagggcctgtgtcctctgtgtccatcctcggaccagggct
gtgcggctgagcctgcgccccgtcttcctgcaacctgggcgcccactcacccgcctgtcg
tgtcagcacctgggagctgtcctggatgacattcctgtccagggctttttcagcaaggcc
ggggccactttcagactgaaggatgggtctctggcctatgctcggctcagccacctctct
gattctaagagtgccttcagtcctgaggccttcaagccaggaagcactcacaagtgtaga
atcatcaactacagccaaatggacgaactggctttgctctcgctgcgcacgtctgttatt
gaagcccagtatctgagctttcatgacatcaagcctggggcattggtaaagggcacagtg
ctgaccataaagccatacgggatgttggtgaaagtgagtgagcaaatcaggggcctggtg
cctcccgtgcacctggctgacatcctgatgaagaatccagagaagaagtaccgcgtcggg
gatgaagtcacatgccgggttttgctttgtgaccctgaagccaaaaagctgatgatgacc
ctgaagaaaaccctggttgagtccaaacttcctgccattacctgctatgccgacgccaag
cctggtctgcagacacatggcttcatcctcagggtcaaggactatggctgcattgtgaag
ttctacaacgacgtgcagggactggtacccaagcacgagctcagtgccgagtatgtccca
gacccagagagggtcttttatgctggccaggtggtgaaggttgcagtgctgaactgtgag
ccgtccaaagagaggatgctcttgtccttcaagctattgagtgatccaaagaaagagcat
gcgggacgtggccagaagaaaggaaaaaccattaatgttgggcagttggtggatgtgaag
gttttagagaagaccaaagacggcctggaggtggctgtcctgccccacaacatccctgct
ttcctccccacgtctcacctgtcggaccacgtcgccaacggcccactgctgtatcactgg
ctccaggccggtgacacccttcacagagtgctgtgtctgagccagagtgagggccacgtc
ctcctttgtaggaagccagcgctggtctccacagtagaggggggccaggatcccaagagc
ttctcagaaatccaacctggaatgctgctcatgggttttgtgaggagcatcaaggactac
ggtgtgttcgtccaatttccttcaggtctcagtggactggcccccaaagctatcatgagt
gacaaatttgtgacctccacaagtgaccactttgtcgaggggcagacggtggtggcgaag
gtgaccaacgtggatgaggagaagcagcggatgctgctgtctctgcggctgtcggactgc
agtctgggggaccgggccaccaccagcctcctgctcttgagccagtgcctggaggagcgg
cagggcgtgcgcagtctcatgagcaaccgagactctgtgttgatccagacgctggccgag
atgatcccagggatggtccttgacctggaggtgcaggaggtgttggaagatggctctgtg
gtgttcagcgagggcccggtgcctggcctggttctgagagccagcagataccaccgggca
gggcaggaggtggaagctgggcagaaaaagaaggccgtgatcctgcacgttgacatggtg
aagttggaagtgcatgtttccctttgccacgatttggtgaatagaaaagctaaaaagctg
aagaaaggcagtgagcaccaggcggtggtgcagtacttggaggagtccttcgccattgcc
tccttggtagagactggcgacctggcagctttctccctgaccactcatctcaacgacacc
ttccgctttgactcggaaaagttgcaggtgggacagggtgtctccctaaccatcaagacc
acggaaccgggaatgactggtcttcttttggctgttgaggggccagctgctaagaggacc
atgagacagacccggaaggactctgagacggtcgacgaggatgatgaaggggatccggcg
atggtcgcagggactaaaaaggagcatgccctctccattggggacatggtcacagggacc
gtcaagtccattaagcccacccatgtagttgtgaccctggaaaacggcaccattggctgc
atccatgcctcccacattctagatgatgttccagtgggtacctctcctactgccaagctg
aaagtcgggaagaaggtcactgcccgagtgatcggcgggcgagacatgaagacattcaag
tttctcccgataagtcatcccagattcatccgaactgtcccagagctgagcattcggccg
agcgagctggcgaaggatggccacactgctctcaacactcactccgtcagcccttcagag
aagattaagcagtaccaggctggccagactgtgacttgcttcttgaagaagtacaacgtg
gttaagaaatggctggaggtggagatagcgccagacatccggggaagaattcccttgttg
ctcacttctcttagcttcaaggttctgaaacatcctgataagaagtttcggattggccag
gccctgaaggccaccgtggttggcccagattcctccaaggccttcttgtgtctctcgctc
ataggtcctcacaagcttgaagagggggaggtggccatgggccgagtggtgaaggtgact
ccccacgaggggctgaccgtctccttcccctttgggaggatgggcagcgtcggtctgttt
cacgtgagcgactcctactcggagacacccctggaggacttcaccccccagaagatcgtc
aggtgttacgtcctgtcgactgcagatgaagtattgactttgtcgctgcgatcgtccagg
acaaacccagagacgaaaagcaagataactgaccccgagatcaactccatccgggacgtt
caggaagggcagctcctgaggggctacgtgcagtccgtccagccgcacggtgtgctcctt
ggcctcggcccctcagttgtgggtgtggcccggtacccgcatgtctcccagtgcggcctg
tccaagaaagccctttgcgacagacacctccccgaagggaagctgctcacagccaaggtc
ctaagcgtgaaccagcagaagaacctggtggagttgtcgttcctccccagcgacacaggg
aagccggacgtgtttcccacccccccaggacagccactgccagcgcaaggggagaggcaa
ggagaggcagaggagagagaccacagaggggagggcgagaaggagaggaagaggaagaac
caggaaaggaaagaaaagagggagcagaagtggcaggaggaggcgcagatgcccagcaaa
gagaagaaagagcctcagcagccacaggcgaagaagcagggcaagcggctgcgcctggag
cccggaagcgagcaggagggggtaagcaagaagcaaaagaaagccgctccatcagaggag
gacgacagtggtgtcgaagtgtattaccgggaaggagaagaggagatcgaagagaggagt
gtgctgcccaaggagaagcagaccagacccgcagaattgccccggctgcagctgtcttcc
agcttcgtgtgggacgtggggctggactctctgaccccggccttgccacctcaaggagag
agctcagacagcgaggaggacgagaagccacagcaagccacgaagaaaaaaagcaagaag
gaaagggagttggagaagcagaaggcagagaaagagctgtcccgcattgaggaggcgctg
atggatcctgggcggcagccagagtcagcagatgattttgatcgactggtgctgagctcc
cccaacagctccatcctgtggctgcagtacatggccttccacctgcaggccacggagatc
gagaaggcccgggccgtggccgagagggctctcaagaccatctccttcagagaggagcag
gagaagctgaacgtgtgggtggccctgctgaacctagaaaacatgtacggctctcaggag
tcgctgaccaaggtcttcgagcgggccgtgcaatacaacgagcctctcaaggtctttctc
cagctggccgacatctacaccaagtcacagaaattccaggaagctggggagctctacaac
cggatgctgaagcgtttccggcaggagaaagctgtctggatcaaatatggtgccttcctt
ctgcggaggggccaggccggggccagtcaccgggcgatgcagcgagccctcgagtgcctg
cctaaaaaagagcacgtggacgtgatctccaagttcgcccagcttgagttccagctgggc
gatgcggagcgggccaaagccattttcgagaacacactgagcacctacccgaagcgcaca
gatgtctggtcggtctacattgacatgaccatcaagcacggcagccagaaggaagtccgg
gacatcttcgagcgggtcattcacctgagtctggcccccaagcggatgaaattcttcttc
aagcgctacctggactacgagaagcagcacggcaccgagaaggacgtgcaggcagtgaag
gccaaggccctggactacgtggaggccaagagctccgtgctggaggactag
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integrated database retrieval system
