Phyllostomus discolor (pale spear-nosed bat): 114496456
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Entry
114496456 CDS
T07739
Symbol
COL16A1
Name
(RefSeq) collagen alpha-1(XVI) chain isoform X1
KO
K24339
collagen type XVI alpha
Organism
pdic
Phyllostomus discolor (pale spear-nosed bat)
Pathway
pdic04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
pdic00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
114496456 (COL16A1)
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Gene cluster
GFIT
Motif
Pfam:
Collagen
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
114496456
NCBI-ProteinID:
XP_035881568
EnsemblRapid:
ENSPDIG00005003544
UniProt:
A0A7E6DRH7
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Position
5:complement(20226383..20276486)
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AA seq
1625 aa
AA seq
DB search
MWAPWAPGLWLLGFWATCSHAASTGEQCPPSQQEGLKLEHRSDLSGNVTGFNLIRRLSLM
KTSAIKKIRNPNGPLILRLGAAPLTQPTRRVFPQGLPDEFALVLTVLLKKHTCRNTWYLF
QVTDGDGYPQISLEVNSQEQSLELRARSHDGDFVSCIFSVPQLFDLRWHKLQLSVAERVA
SVHVDCTSASSQPLGPRRPIRPVGHVFLGLDAEQAKPVSFDLQQAHIYCDPELVLEEGCC
EILPGGCPPETSKARRDTQSNELIEINPQTEGKVYTRCFCLEEPQTSKVDAQLPGRIRQS
AERGTKAHQEIAPDECPPCAHGARESNVTIGPSGLKGGKGEQGLPGPSGPKGEKGARGND
CVRISPDAPLQCSEGPKGEKGVSGALGPSGPPGSTGQKGQKGERGDGGIKGSTGKPGRDG
RPGEICVMGPKGQKGDPGFVGPEGLAGEPGPPGRPGPPGIGLPGTPGDPGGPPGPKGDKG
SSGVPGKEGPGGKPGKPGVPGLKGEKGDPCEVCPTLPEGFQNFVGLPGRPGPKGEPGDPA
PAREGLGAAGRKGDRGDRGIQGQKGEKGESCLSCSAAVGAQHLGPSTGVKEGMGPPAFGL
PGPRGEVGAPGPVGLKGEKGDFGEAGPAGSSGPPGPVGPTGIKGEKGEPCEPCSAPSEPQ
NRDSHVLALPGPPGAKGEPGPPGFGLPGKQGKAGERGLKGQKGDAGNPGDPGTPGTSGQP
GLSGEPGVRGPMGPKGEKGDGCTACPSLQGALTDAVGLPGKPGPKGEPGPEGVGRPGKPG
QPGLPGVQGPPGLKGVQGEPGPPGIGAQGPQGEPGAQGLPGIQGFPGPRGPPGPAGEKGT
KGPPGVKGAVGPMGLPGASVSGPPGPDGQQGQTGLPGARGMPGEKGSQGEKGEPGECSCP
PRGDPVFSGMPGAPGLWMGSSWQPGPQGPPGVPGPPGPPGVPGLQGVPGNNGLPGQPGLP
AELGSLPIEQHLLQSLCGDCVQRQTARPVALLQKGEKGDQGIPGVPGLDNCARCFIERER
PRAEEARGDNSEGDPGCAGSPGLPGPPGLPGQRGEEGPPGTRGSPGPPGPIGPPGFPGAV
GSPGLPGLQGERGLRGLTGEKGEPGAPGQPGYPGAMGPPGLPGSKGERGYAGPSGEKGES
GPPGSEGLPGPPGPAGPRGERGPQGSSGEKGDQGFQGQPGFPGPPGPPGFPGKAGAPGPP
GPPAEKGSEGIRGPSGMPGPPGPPGPPGIQGPAGLDGLDGKDGKPGLRGDPGVAGPPGLM
GPPGFKGKPGLPGLPGPKGDCGQPGPPGSSGRPGAEGEPGAMGPQGRPGPPGHAGPAGPP
GQPGPAGISAVGPKGDRGATGERGLSGLPGQPGPPGHPGPPGEPGADGAAGKEGPPGKQG
FHGSPGPKGDPGPSGQKGQAGEKGRAGMPGGPGKSGPMGPVGPPGPAGERGHPGSPGPTG
NPGLPGAPGSMGDMVNYDEIKRFIRQEIIKMFDERMAYYTSRIQFPVEVAAAPGRPGPPG
KDGAPGRPGAPGSPGLPGQIGREGRQGLPGMRGLPGTKGEKGDAGVGIAGENGLPGPPGP
QGPPGYGKMGATGPMGQQGIPGIPGPPGPTGPPGKAGQCSPADCFGAMPMEQQYPPMKNM
KGPFG
NT seq
4878 nt
NT seq
+upstream
nt +downstream
nt
atgtgggcaccttgggccccaggcctatggctgcttggtttctgggccacctgcagtcac
gcggcgagtacaggtgagcagtgcccaccttcgcagcaggaaggactcaagttggaacat
agaagtgacttatcgggcaatgtgaccggcttcaacctcatccgccgactcagcctcatg
aagacgtcggccatcaagaagatccgcaaccccaatgggcccctcatcctgcgactgggg
gcagccccactcacccagcccacacgacgtgtgttccctcagggtctccccgatgagttt
gccctggtgctgaccgtgttgctgaagaaacacacctgccggaacacgtggtatttgttt
caagtgaccgatggagatgggtacccacagatttctctggaagtcaacagccaagagcag
agcctggagctccgggcccggagccacgacggcgacttcgtgtcctgcatcttctcggtg
ccccagctctttgacctgcgttggcacaagctgcagctgagcgtggcggaacgtgtggcc
tctgtgcatgtggactgcacctcagcctcctcccagcccctggggccccggaggcccatt
cggcccgtgggccacgtctttctgggcttggacgctgagcaggccaagcccgtctcgttt
gaccttcagcaggcgcacatctactgtgacccggaactcgtgctcgaggagggctgctgt
gagattctaccaggagggtgccctccagagacctccaaggcccgtcgggacacccagagc
aacgagctcatcgaaatcaatccacagactgagggcaaggtctacacccgctgcttctgc
ctggaggagcctcaaaccagcaaggtggatgcccagctgccgggaagaatcagacagagt
gcggaaaggggaacaaaggcccaccaggagatagcccccgatgagtgcccaccctgtgcc
cacggtgcccgggaaagcaatgttacaattggtccctctggcctcaagggagggaaaggt
gagcagggcctgcctggtccatcaggccccaagggagagaagggagcccggggcaatgac
tgtgtccgaatctctccggatgccccgcttcagtgttcggaaggcccgaagggagagaag
ggggtgtcaggagccttgggaccctcaggacccccgggctccacaggccagaagggccag
aaaggagagaggggagacggaggcatcaagggctctacgggaaagccaggccgagatgga
cggcccggagagatctgtgtcatggggcccaaaggacagaagggagaccctggctttgtc
gggcctgaggggcttgcgggagagcccgggccgcccggccgacccgggccccccgggata
ggactccctgggactccgggggacccgggtggcccaccaggccctaaaggagacaagggc
agctccggggtgccgggaaaggagggcccaggcgggaaacctgggaagccaggggtgccg
gggctgaagggagaaaagggtgacccctgtgaagtgtgtccaacgctgcctgaagggttc
cagaacttcgtggggctccctggaagaccagggcccaagggggaaccgggtgatcctgca
ccagccagggagggcctgggagctgctggacgaaaaggtgatcggggagaccgcggaatc
caaggccaaaaaggagagaagggcgagtcctgtttgtcctgcagcgcagctgtgggggcc
cagcatctcgggccttctacaggggtcaaagagggcatgggcccccctgcctttggtttg
cctggcccccggggggaagttggggctccagggccagtggggctgaaaggagagaagggt
gatttcggggaggcggggccggctggcagttcgggaccaccagggcccgtgggacccacc
ggcatcaaaggggagaagggggagccttgtgagccatgttcagctccgtccgagcctcag
aacagggacagccatgtgctggccttgcctggccctcctggagcaaagggagagcctggg
cctcccggcttcggcctgccgggaaaacagggcaaggctggagagcgtggcctgaagggg
cagaagggtgacgcaggaaatccaggagatcctggaacgcctggcacctcggggcagccg
ggactgtcgggagagcctggggttcggggccccatggggccaaaaggagagaagggtgat
ggctgcacggcctgccccagcctgcagggggcgttgactgacgcggtgggactgcctgga
aagccaggccccaaaggagagccaggcccagaaggcgtgggccggcctgggaaaccgggc
cagcctggtctcccaggagttcaagggcccccaggactgaagggcgtacagggagagccg
gggcctccaggaataggagcccaggggccccagggggaacctggagcccagggtttgcct
ggcattcaggggttcccgggacctcgaggaccacctggccctgctggagagaagggtacc
aagggacctccgggggtgaaaggagccgttggacccatgggacttcctggtgccagtgtc
tccgggcctccgggacctgatgggcagcaaggacagactggacttccgggagccagaggg
atgcccggtgagaaaggatctcagggagagaagggcgagcccggggagtgctcctgtccc
ccccgaggagaccctgtcttctctggcatgccgggtgctccgggactttggatgggcagc
tcctggcagccgggcccgcagggtcccccaggagttcccggaccaccaggcccccctggg
gtgccagggctgcagggagtgcctggaaacaatggtttgccgggacagcccgggctgcct
gcagaactggggtccttacccattgaacagcacctccttcagagcctctgcggggactgt
gtccagaggcagacggcccgcccagtggccctcctgcagaaaggggagaagggagaccag
ggcatccctggcgtgccaggccttgacaactgtgcccggtgcttcatagagcgggagcgc
ccccgagctgaggaggcccggggagacaacagcgagggcgacccgggctgtgctgggagc
cccggcctgcccggtcctccaggactgcccggccagagaggagaagagggtccgcccggc
acgaggggctccccgggtcctccaggccccattggccccccaggttttcctggtgccgtt
ggctcccccggattgcctggtcttcaaggagagcgaggcctcaggggcctgacgggggag
aagggggagccgggtgctcccggacaacctggctacccaggcgccatgggcccaccagga
ctgcctggcagcaagggggagcgaggctacgctgggccctcgggagagaagggagaatcg
ggcccaccaggctctgaaggcctcccaggtcccccaggcccagcgggtccccgaggagag
agaggaccccaagggagctcgggtgagaagggtgaccagggatttcaaggccagccaggc
tttccgggccccccgggtccccctggattcccaggcaaagcaggagcaccgggcccaccg
ggacccccagcggaaaagggcagcgaagggattcgaggtccatcaggcatgcctgggccc
cctggaccaccagggcctcccggaattcagggccctgccggcctggacggtctggatgga
aaggacggcaagcctggcttgaggggagaccccggtgtcgctggcccacccggactcatg
ggacccccgggtttcaaggggaaaccaggacttcctggccttccaggaccaaagggcgac
tgtggacagccaggtcctccagggagcagcggccggcccggggctgagggtgagcctggt
gccatgggaccccagggaagacccggcccccctggccacgctggaccagcggggcctcca
ggccagccaggcccagctgggatttctgcagtgggcccaaagggagaccggggagccact
ggggaaaggggcctgtcaggcctcccgggccagcctggcccacctggacaccccggccct
ccgggtgagcctggtgcggatggtgcggccggcaaagagggaccgcctggaaaacaggga
ttccatggatcccctggtccaaagggcgatccaggaccttcaggacagaagggccaggca
ggagagaaaggaagagctggcatgcctggtgggcctggcaagagtggccccatggggcct
gttgggccaccaggtcctgcaggagagagaggccatcctggatctccagggcctacaggg
aaccccggattgcccggggctcctggctccatgggagacatggtgaattacgatgaaatc
aagagattcatcagacaagagatcattaaaatgtttgatgagaggatggcttactacacc
tccaggattcagttccctgtggaggtggcggcagctcccggacgaccagggcccccaggg
aaggatggtgctcccggccggccaggcgctccagggtcacctgggctccctgggcagatt
ggcagggaaggacggcagggcctgccgggaatgagaggattgcctggtaccaaaggtgag
aagggagacgctggtgttggcatcgcaggagaaaatggcctccccggccccccaggtcct
cagggtcccccggggtatggcaagatgggcgcaaccggaccgatgggccaacaaggcatt
cctggcatccctggacccccgggccccacgggcccgccgggcaaggctggccagtgcagc
ccggcggactgcttcggggccatgcccatggagcagcagtacccgcccatgaaaaacatg
aagggccctttcggctga
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