Phyllostomus discolor (pale spear-nosed bat): 114496606
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Entry
114496606 CDS
T07739
Symbol
NDC1
Name
(RefSeq) nucleoporin NDC1
KO
K14315
nucleoporin NDC1
Organism
pdic
Phyllostomus discolor (pale spear-nosed bat)
Pathway
pdic03013
Nucleocytoplasmic transport
pdic05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
pdic00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
114496606 (NDC1)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
114496606 (NDC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdic03019
]
114496606 (NDC1)
Messenger RNA biogenesis [BR:
pdic03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
114496606 (NDC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
114496606
NCBI-ProteinID:
XP_028368007
UniProt:
A0A6J2LJT4
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All DBs
Position
5:complement(38054927..38103013)
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AA seq
672 aa
AA seq
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MATVATQPCASGSRDILWRVLGWRIVTSIVWSVLLLPICTTVFIIFSSIDLFHPIQWLSD
SFNDLYSSRVIFYLLLLSVVVIIISIFNVEFYTVVPSIPCSRLALIGKIVHPQQLLHSFV
HAAMGMMVAWCAAVMAKGRYSFLLVPCTRTESLDGPAAQTCLNEYHLFFLLAGAFMGYSY
SLLYFINNMNYLPFPIIQQYKFLRFRRSLLLLIKHSCMESLFLIRNFCIVYYFLGHIPKA
WISTAMDLQIDEQFHRPLDTVSGLLNLSLLYHVWLCGVFLLTTWYISWILFKIYATEAHL
FPVQPPFAEESDECLPKVLNSSPPLIIKYLALQDLMLLSQYSPSRRQEVFSLSQPGGHPH
NWTAISRECLNLLNDMTQKLVLHQEAAATNGRVMSSSYTVEPKKANFPEETTFLTPKSSQ
MPQPSMPPLIKTSLFSSKLSTPGVASPLGSPFGSSVMNRMAGIFDVNTCCGSPQGSQLIR
RGPRLWTSASDQQTELSNLPSPLRPEGKTVRQPSVIYSWIHNKHEQIKNFLSKRVLIMYF
FSKHPEASIQAVFSDAQMHIWALEGLSHLVAASFTEDRFGVVQTTLPAILNTLLTLQEAV
DKYFKLPHASSKPPRISGTLVDTSYKTLRFAFRASLKTAIYRITTTFGEHLNAVQASAEH
QKRLQQFLEFKE
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atggccacggttgcgactcagccttgcgccagcgggtcgcgggacatcttgtggcgcgtt
ttgggctggaggatagttacaagtattgtctggtcagtgctgcttctacccatctgtacc
acagtatttataatcttcagtagcattgatttatttcatcctatacagtggctgtctgat
tctttcaatgatctatatagttcccgtgtgatcttttacctcttgctgctgtcagtggta
gtaataataataagtatcttcaatgtggagttttatacagtcgtaccctccattccctgc
tccagactggcactgatagggaagatcgtccatccccagcagctcctgcactcgtttgtt
cacgccgcgatgggaatgatggtggcttggtgcgctgcggtgatggccaagggccggtac
agtttcctcttggttccctgcactcgtactgagagcttagatggccccgctgcacaaacc
tgcttaaatgagtatcatctttttttcctactggctggagcatttatgggctatagttat
agcctcctctattttattaacaacatgaactatcttccatttcccatcatacagcaatac
aagttcttgcgctttaggagatctttgctcttactaattaaacacagttgtatggaatca
ctgttcctgattagaaatttctgcattgtgtattattttcttggccatattcccaaagct
tggattagcactgctatggaccttcaaatagatgagcaatttcataggcctcttgatact
gtgagtggcctcttgaatctctcattactctaccatgtctggttatgtggagtctttctc
ctgacgacttggtacatctcatggatactcttcaaaatctatgctacagaggctcatctg
ttccctgttcaaccaccatttgcagaagagtcagatgaatgcctcccaaaagttttaaac
agcagtccacctctcatcataaagtatttggccttgcaggacctgatgttgctttctcaa
tattctccttcacgaagacaagaagtttttagtcttagccaaccaggtggacacccccac
aactggacagccatttcaagggagtgtttaaatcttctaaatgatatgactcagaagctg
gttctccaccaagaagctgctgctaccaatggaagagtaatgtcttcatcatacaccgtg
gaacccaagaaagcgaattttccagaagaaactacctttctgacccccaaatctagccag
atgcctcagccttcaatgccaccattaattaagacatcactgttttcctcgaaattatct
acaccgggtgttgccagtccccttgggtctccatttggctctagtgtaatgaatcggatg
gctggaatttttgatgtaaacacctgctgtggctcaccgcaaggttctcagctaataaga
agagggccacgattatggacttctgcttctgatcagcaaacagaactttctaatcttcca
tctcctcttagacctgagggtaagacagtgagacagcccagtgtgatttattcatggatt
cataataaacatgaacagattaagaatttcttgtcaaaacgggtgctaataatgtatttt
ttcagtaagcacccagaggcctccattcaggctgttttctcagatgcccaaatgcatatt
tgggctttggaaggtctctctcacttagtagcagcgtcatttacagaagacagatttgga
gttgtccagactactctaccagcaattcttaataccttgttgacgctgcaggaggccgtt
gacaagtacttcaagcttcctcacgcttccagtaaaccaccgcggatttcaggaaccctt
gtggatacttcttataaaacattaagatttgcgtttagagcatcactaaaaaccgccatc
tatcgaataactactacatttggtgaacatctaaatgctgtgcaagcatctgcagaacat
cagaaaagacttcaacagttcttggagttcaaagaatag
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