Phyllostomus discolor (pale spear-nosed bat): 114496670
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Entry
114496670 CDS
T07739
Symbol
EXOSC1
Name
(RefSeq) exosome complex component CSL4 isoform X1
KO
K07573
exosome complex component CSL4
Organism
pdic
Phyllostomus discolor (pale spear-nosed bat)
Pathway
pdic03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pdic00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
114496670 (EXOSC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdic03019
]
114496670 (EXOSC1)
Messenger RNA biogenesis [BR:
pdic03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
114496670 (EXOSC1)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
114496670 (EXOSC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
RRP4_S1
Motif
Other DBs
NCBI-GeneID:
114496670
NCBI-ProteinID:
XP_028368115
UniProt:
A0A6J2LQI2
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All DBs
Position
5:complement(150520985..150526760)
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AA seq
195 aa
AA seq
DB search
MAPPVRYCIPGERLCNLEEGSPGSGTYTRHGYIFSSLAGCVTKSSENGALPVVSVMRETE
SQLLPDVGAIVTCKVSSINSRFAKVHILYVGSTPLKNSFRGTIRKEDVRATEKDKVEIYK
SFRPGDIVLAKVISLGDAQSNYLLTTAENELGVVVAHSESGVQMVPISWCEMQCPKTHTK
EFRKVARVQPEFLQT
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
atggcgccacccgtgaggtactgcatcccaggcgaacgtctgtgtaacttggaggagggc
agcccgggcagcggcacctacacccggcacggctacatcttttcgtcgcttgctggctgc
gtgacgaagagcagcgagaacggcgcgcttcctgtcgtgtctgtgatgagagaaacagag
tcccagttactgccagatgtgggagctattgtaacctgtaaggtctctagcatcaattca
cgttttgccaaagtgcacatcctgtatgtggggtccacaccacttaaaaactcttttcga
ggaactatccgcaaggaagatgttcgagctactgaaaaagacaaggttgaaatttataag
agttttcgccccggtgacattgtcttggccaaagtgatctccctaggcgacgcacagtcc
aactacctcctgaccacggcggaaaatgagctgggcgtggtggtggctcacagtgaatcg
ggtgtgcagatggttcccatcagctggtgtgagatgcagtgccccaagacccacactaaa
gaattccggaaagtggcccgagtacagcctgaattcttgcaaacctaa
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