Phyllostomus discolor (pale spear-nosed bat): 114497136
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Entry
114497136 CDS
T07739
Symbol
PARN
Name
(RefSeq) poly(A)-specific ribonuclease PARN isoform X1
KO
K01148
poly(A)-specific ribonuclease [EC:
3.1.13.4
]
Organism
pdic
Phyllostomus discolor (pale spear-nosed bat)
Pathway
pdic03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pdic00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
114497136 (PARN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdic03019
]
114497136 (PARN)
Enzymes [BR:
pdic01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
114497136 (PARN)
Messenger RNA biogenesis [BR:
pdic03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
114497136 (PARN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAF1
RNA_bind
R3H
RRM_Thc1
NCBP3
RRM_1
T6PP_C
Motif
Other DBs
NCBI-GeneID:
114497136
NCBI-ProteinID:
XP_028368539
UniProt:
A0A6J2LNK8
LinkDB
All DBs
Position
3:102324860..102500340
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AA seq
638 aa
AA seq
DB search
MEIIRSNFKSNLHKVYQAIEEADFLAIDGEFSGISDGPSVTALTNGFDTPEERYQKLKKH
SMDFLLFQFGLCTFKYDYINSKYIIKSFNFYVFPKPFNRSSPDVKFVCQSSSIDFLASQG
FDFNKVFRNGIPYLNQEEERQLREQYDEKRLQSNGAGALSYVSPNTSKCPVTIPEDQKKF
IDQVVEKIEDLLQSEENKNLDLEPCTGFQRKLIYQTLSWKYPKGIHVETLETEKKERYIV
VSKVDEEERKRREQQKHAKEQEELNDAVGFSRVIHAIANSGKLVIGHNMLLDVMHTVHQF
CCPLPEDLNEFKEMTTCVFPRLLDTKLMASTQPFKDIINNTSLAELEKRLKETPFNPPKV
ESAEGFPSYDTASEQLHEAGYDAYITGLCFISMTNYLGSFLSPPKIHVSARSKLIEPFIN
KLFLMRVMDIPYLNLEGPDLQPKRDHVLHVTFPKEWKTSDLYQLFSAFGNIQISWIDDTS
AFVSLSQPEQVQIAVNTSKYAESYRIQTYAEYVGKKHEEKQIKRKWPEDSWKEVERKRLN
NQCISCALQNHYYRTNSLTATSTVRKRSLSPNQADTGSEARVSEEISDLELEQTDTCAES
PSEKRKKTKKFKRMKKDHSPAGSISDSSAKLFEVPDTW
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atggagataatcaggagcaattttaagagtaatcttcataaagtgtaccaggccatagag
gaagcggacttccttgccatcgatggggagttttcaggaatcagtgatggaccttcagtc
accgcattaacaaatggttttgatactccggaagaaaggtatcagaagcttaaaaagcat
tccatggactttttgctgtttcagtttggcctttgcacttttaagtatgactacataaat
tcaaagtatataataaagtcatttaacttctatgttttcccgaaacccttcaatagatcc
tccccagatgtcaaatttgtttgtcagagctcaagtattgactttctggcaagccaagga
tttgattttaataaggtttttcgcaatggaattccatatttaaatcaggaagaagaaaga
cagttaagagagcagtatgatgaaaaacgtttacagtccaatggtgcaggagctctatca
tatgtgtctcctaacacatcaaaatgtcctgtgacgattcctgaggatcagaaaaagttt
attgaccaagtggtagagaaaatagaagatttattacaaagtgaagaaaataagaacttg
gatttagagccatgtacagggttccaaagaaaactaatttatcagactttgagctggaag
tatcccaaaggcattcacgttgagactttagaaactgaaaagaaagagcgatacatagtt
gtcagtaaagtagatgaagaagaacgcaaaagaagagagcagcagaaacatgctaaagaa
caggaagaactgaatgatgctgtgggattttctagagtcattcatgccattgccaattca
ggaaagcttgttattggacacaatatgctcttggatgttatgcacacagttcatcagttc
tgctgccctctccctgaggacttaaatgaatttaaggagatgacaacatgtgtttttccg
agactcttggatactaaattgatggccagcacacaaccttttaaggatatcattaacaac
acatcccttgcagagttggaaaagcgattaaaagagacacctttcaaccctcctaaagtt
gaaagtgcagaaggttttccaagttatgacacagcttctgagcagctccacgaggcaggc
tatgatgcttatatcacaggattgtgtttcatctccatgacaaactacctaggttcattt
cttagtcctccaaaaattcatgtgtctgccagatcaaaactcattgaaccttttattaac
aagttatttcttatgagagtcatggatattccctatctaaacttggaaggaccagacttg
cagcctaaacgcgatcatgttctccatgtgacattccccaaagagtggaaaaccagtgac
ctttaccagcttttcagtgcctttggtaacattcagatatcttggattgatgatacatca
gcattcgtttctcttagccagcctgagcaagtacaaattgctgtcaataccagcaaatat
gcagaaagctatcggattcagacgtatgctgaatatgtgggaaaaaaacatgaggagaag
cagatcaagagaaagtggccagaagatagttggaaggaggttgagagaaagcggttaaac
aatcagtgcatatcctgtgctctgcagaatcactattaccgcaccaatagtcttacagcc
accagcacagtgagaaagagaagtctgagtcccaatcaagcagacacgggctccgaggcc
agagtatcagaagagatatctgaccttgaacttgagcagacagatacctgtgcagaatca
ccctcggaaaaaaggaaaaagactaagaaatttaaaagaatgaagaaggaccattctcca
gcaggaagcatctcggacagctctgccaagctcttcgaagttcctgacacgtggtaa
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