KEGG   Phyllostomus discolor (pale spear-nosed bat): 114497959
Entry
114497959         CDS       T07739                                 
Symbol
SNRNP40
Name
(RefSeq) U5 small nuclear ribonucleoprotein 40 kDa protein
  KO
K12857  Prp8 binding protein
Organism
pdic  Phyllostomus discolor (pale spear-nosed bat)
Pathway
pdic03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pdic00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    114497959 (SNRNP40)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pdic03041]
    114497959 (SNRNP40)
Spliceosome [BR:pdic03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    114497959 (SNRNP40)
 Complex C
   U5 SnRNP specific factors
    114497959 (SNRNP40)
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40_Prp19 Beta-prop_TEP1_2nd WD40_CDC20-Fz WD40_WDHD1_1st EIF3I Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_2nd WDR55 WD40_Gbeta Beta-prop_WDR36-Utp21_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_WDR90_POC16_2nd Beta-prop_Aladin Beta-prop_TEP1_C Beta-prop_WDR75_1st Beta-prop_EML Beta-prop_WDR41 NBCH_WD40 WDR90_beta-prop_4th Beta-prop_SCAP Beta-prop_EIPR1 WD40_MABP1-WDR62_1st ANAPC4_WD40 Beta-prop_SPT8 Beta-prop_IFT122_1st Beta-prop_RIG_2nd Beta-prop_DCAF4 WD40_RFWD3 Beta-prop_IFT140_1st Beta-prop_WDR19_1st Beta-prop_Vps41 Beta-prop_WDR75_2nd eIF2A Beta-prop_WDR35_TULP_N Beta-prop_ACSF4 Beta-prop_NWD2_C Beta-prop_RIG_1st Cytochrom_D1 WDR54 WD40_like Beta-prop_Nup120_160
Other DBs
NCBI-GeneID: 114497959
NCBI-ProteinID: XP_028369774
UniProt: A0A6J2LRZ4
LinkDB
Position
5:complement(19972271..19999707)
AA seq 358 aa
MIEQQKRKGPELPLVPVKRQRHELLLGAAGSGPGAGQQQAAPGALLQAGPPRCSSLQAPI
MLLSGHEGEVYCCKFHPSGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNT
DGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLW
DIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVT
GLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSK
IAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIILSASSDKRLYMGEIQ
NT seq 1077 nt   +upstreamnt  +downstreamnt
atgatagaacaacagaagcgcaagggtccagagttgccgctggttccagtcaagaggcag
cggcatgagttgcttttgggagcggcggggtctggccccggagcgggacagcagcaggcg
gcgccgggcgccttgctgcaagcggggcctccaaggtgttcctcccttcaagcgccaatc
atgcttctctcaggacatgaaggggaagtgtactgctgcaaatttcaccccagtggatcc
accttggcatctgcaggatttgaccgactgatattgttgtggaatgtctacggtgactgt
gataactatgcaacattgaagggacacagtggagcagtgatggaactgcattataacaca
gatggcagtatgctcttctcagcatccacagataaaactgtggcagtgtgggatagtgaa
acaggcgagagggttaaaaggctgaagggacacacttcatttgtgaactcctgttacccg
gccaggaggggcccccagcttgtctgcactggcagtgatgatggcacagttaagctttgg
gacatccggaagaaagcagccattcagacatttcagaatacctatcaggtattagctgtg
accttcaatgacacaagtgaccagattatttctggtggaatagacaatgatatcaaggtc
tgggacctgcgccaaaacaagctgacctacaccatgagaggccatgcagactcggtgact
ggcctgagtttgagttctgaaggctcttatctcctgtccaatgcaatggataatacagtg
cgggtctgggatgtccgaccatttgctcccaaagagagatgtgtaaagatatttcaagga
aatgtgcacaactttgaaaagaatcttctgagatgttcttggtcacctgatggaagcaag
atagcagctggctccgccgacaggtttgtgtatgtatgggataccacaagcaggaggatt
ttgtacaagttgcccggccacgctggctccatcaatgaagtggctttccaccccgacgag
cccatcattctctccgcgtccagcgacaagagactgtacatgggggagattcagtga

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