Phyllostomus discolor (pale spear-nosed bat): 114497988
Help
Entry
114497988 CDS
T07739
Symbol
ARID1A
Name
(RefSeq) AT-rich interactive domain-containing protein 1A isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
pdic
Phyllostomus discolor (pale spear-nosed bat)
Pathway
pdic03082
ATP-dependent chromatin remodeling
pdic04714
Thermogenesis
pdic05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
pdic00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
114497988 (ARID1A)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
114497988 (ARID1A)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
114497988 (ARID1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pdic03000
]
114497988 (ARID1A)
03021 Transcription machinery [BR:
pdic03021
]
114497988 (ARID1A)
03036 Chromosome and associated proteins [BR:
pdic03036
]
114497988 (ARID1A)
Transcription factors [BR:
pdic03000
]
Eukaryotic type
Helix-turn-helix
ARID
114497988 (ARID1A)
Transcription machinery [BR:
pdic03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
114497988 (ARID1A)
Chromosome and associated proteins [BR:
pdic03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
114497988 (ARID1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
114497988
NCBI-ProteinID:
XP_028369809
EnsemblRapid:
ENSPDIG00005013957
UniProt:
A0A6J2LS22
LinkDB
All DBs
Position
5:16895759..16963632
Genome browser
AA seq
2279 aa
AA seq
DB search
MAAQVAPAAASSLGNPPPPPSELKKAEQQQQQREEAGGEAAAAAAERGEMKAAAGQESEG
PTVGPPQPLGKELQDGAESNGGGSGAGGGGPGAEPDLKNSNGNAGPRPALNNNLTEPPGG
GGSSSSSSDGVGAPPHSAAAALPPPAYGFGQPYGRSPSAVAAAAAAVFHQQHGGQQSPAL
AALQSGGGGGGLEPYAGPQQNSHDHGFPNHQYNSYYPNRSAYPPPPQAYALSSPRGSTPG
SGAAAAAGSKPPPSSSASASSSSSSFAQQRFGAMGGGGSSAAGGGTPQPTATPTLNQLLT
SPSSARGYQGYPGGDYGGGPQDGGAGKGPADMASQCWGAAAAAAAVASGGAQQRSHHAPM
SPGSSGGGGQPLARTPQPSSPMDQMGKMRPQPYGGTNPYSQQQGPPSGPQQGHGYPGQPY
GSQTPQRYPMSMQSRAQSTMGSLSYAQQIPPYGQQGPGAYGQQGQTPYYNQQSPHPQQQQ
PPYSQQPPSQTPHAQPSYQQQPQSQPPQLQSAQPPYSQQPTQPPHQQSPTPYPSQQSTTQ
QHPQSQPPYSQPQAQSPYQQQQPQQPASSTLSQQAAYPQPQSQQSQQTAYSQQRFPPPQE
LSQDSFGSQASSTPSMTSSKGGQEDMNLSLQSRPSSLPDLSGSIDDLPMGTEGALSPGVS
TSGISSSQGEQSNPAQSPFSPHTSPHLPGIRGPSPSPVGSPASVAQSRSGPLSPAAVPGN
QMPPRPPSGQSDSIIHPSMNPSSIAQERGYMQRNPQMPQYSSPQPGSALSPRQPSGGQMH
TGMGSYQQNSMGSYGPQGSQYGPQGGYPRQPNYNALPNANYPSAGMAGSMNPMGAGGQMH
GQPGIPPYGTLPPGRMSHASMGNRPYGPNMANMPPQVGSGMCPPPGGMNRKTQETAVAMH
VAANSIQNRPPGYPNMNQGGIMGTGPPYGQGINSMAGMINPQGPPYPMGGTMANNSAGMA
ASPEMMGLGDVKLTPATKMNNKADGTPKTESKSKKSSSSTTTNEKITKLYELGGEPERKM
WVDRYLAFTEEKAMGMTNLPAVGRKPLDLYRLYVSVKEIGGLTQVNKNKKWRELATNLNV
GTSSSAASSLKKQYIQCLYAFECKIERGEDPPPDIFAAADSKKSQPKIQPPSPAGSGSMQ
GPQTPQSTSSSMAEGGDLKPPTPASTPHSQIPPLPGMSRSNSVGIQDAFPDGGDPTFQKR
NSMTPNPGYQPSMNTSDMMGRMSYEPNKDPYGSMRKAPGSDPFMSSGQGPNGGMGDPYSR
AAGPGLANVAMGPRQHYPYGGPYDRVRTEPGIGPEGNMGTGAPQPNLMPSNPDSGMYSPS
RYPPQQQQQQQRHDSYGNQFTQGTPSSSPFPSQQTTMYQQQQQNYKRPMDSTYGPPAKRH
EGEMYSVPYSTGQGQPQQQQLPPAQPQTASQQQAAQPSPQQDVYNQYGNAYPATAAAATE
RRPASGPQNQFPFQFGRDRVSAPPGSSAQQNIPPQMMGGPIQASAEVAQQGTMWQGRNDM
TYNYTNRQSTGSAPQGPAYHGVNRTDEMLHTDQRANHEGSWPSHGTRQPPYGPSAPVPAM
TRPPPSNYQPPPSMQNHIPQVSSPAPLPRPMENRTSPSKSPFLHSGMKMQKAGPPVPASH
IAPAPVQPPMIRRDITFPPGSVEATQPVLKQRRRLTMKDIGTPEAWRVMMSLKSGLLAES
TWALDTINILLYDDNSIMTFNLSQLPGLLELLVEYFRRCLIEIFGILKEYEVGDPGQRTL
LDPGRFSKASSPTPVDGEDEEDLLGPKLEEEEEEVVENDEEMAFSGKDKAASENSEEKLT
SKFDKLPVKIVQKNDPFVVDCSDKLGRVQEFDSGLLHWRIGGGDTTEHIQTHFESKTELL
PTQPHMPCLPVTRKHIIAGEGTQGTTEQEGPPPDGPPEKRITATMDDMLSTRSSTLTEEG
AKSTEATKESSKFPFGISPAQSHRNIKILEDEPHSKDETPLCTLLDWQDSLAKRCICVSN
TIRSLSFVPGNDFEMSKHPGLLLILGKLILLHHKHPERKQAPLTYEKEEEQDQGVSCNKV
EWWWDCLEMLRENTLVTLANISGQLDLSPYPESICLPVLDGLLHWAVCPSAEAQDPFSTL
GPNAVLSPQRLVLETLSKLSIQDNNVDLILATPPFSRLEKLYSTMVRFLSDRKNPVCREM
AVVLLANLAQGDSLAARAIAVQKGSIGNLLGFLEDSLAATQFQQSQASLLHMQNPPFEPT
SVDMMRRAARALLALAKVDENHSEFTLYESRLLDISVSPLMNSLVSQVICDVLFLIGQS
NT seq
6840 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgcaggtcgcccccgccgccgccagcagcctgggcaacccgccgccgccgccc
tcggagctgaagaaagcggagcagcagcagcagcagcgggaggaggcggggggcgaggcg
gcggcggcagcggccgagcgcggggaaatgaaggcagccgccggccaggaaagcgagggc
cccacggtggggccgccgcagccactgggaaaggagctgcaggacggggccgagagcaat
gggggtggcagcggagccggcggcggcgggcccggcgcggagccggaccttaagaactcg
aacgggaacgcgggccctaggcccgccctgaacaataacctcacggagccgcccggtggc
ggcggcagcagcagcagcagcagcgatggggtgggggcgcctcctcactcagccgcggcc
gccttgccgcccccagcttacggcttcgggcaaccctacggccggagcccgtctgccgtc
gccgccgcggcggccgccgtcttccaccaacaacatggcggacaacaaagccctgccctg
gcagcgctgcagagcggcggcggcggcgggggcctggagccctacgcggggccccagcag
aactcgcacgaccacggcttccccaaccaccagtacaactcctactatcccaaccgcagc
gcctaccccccgcctccccaggcctacgcgctgagctccccgagaggtagcactccgggc
tccggcgcggcggcggccgccggctccaagccgcctccatcctccagcgcctccgcctcc
tcgtcgtcttcgtccttcgctcagcagcgcttcggggccatggggggaggcggctcctca
gcggccggcgggggaaccccccagcccaccgccacccccaccctcaaccaactgctcacg
tcgcccagttcggcccggggctaccagggctaccctgggggcgactacggcggcgggccc
caggacgggggcgccggcaagggcccggcggacatggcctcgcagtgctggggggctgct
gctgcggcggcggcagtcgcctcgggaggggcccaacaaaggagccaccacgcgcccatg
agccccgggagcagcggcggcggggggcagccgctcgcccggacccctcagccatccagt
ccaatggatcagatgggcaagatgagacctcagccatatggtggaactaacccatactcg
caacaacagggacctccgtcaggaccgcagcaagggcatgggtacccagggcagccatat
gggtcccagacgccacagcggtacccgatgagcatgcagagccgggcgcagagtaccatg
ggcagcctctcgtatgcacagcagattcctccttatggacaacaaggtcccggcgcatat
ggtcagcagggccagactccgtattacaaccagcaaagtcctcacccccagcagcagcag
ccgccctactcccagcaaccgccatctcagacccctcatgcccaaccttcatatcagcag
cagccacagtctcagccaccacagctccagtctgctcagcctccatattcccagcagcca
actcagcctccacatcagcagtctccaactccatacccctcccaacagtctacaacccag
cagcatccccagagccagcccccctactcacagccacaggcacagtctccctaccagcag
cagcaacctcagcagccagcttcctcaacgctctcccagcaggctgcataccctcagccc
cagtctcagcagtcacagcaaactgcctattcccagcagcgcttccctccaccacaggag
ttatctcaagattcatttgggtctcaggcatcctcaaccccctcaatgacctctagtaag
ggagggcaagaagatatgaacctgagtcttcagtcaagaccctcgagcttgcctgatcta
tctggttcaatagacgatctccccatggggacagaaggagctctgagccctggagtgagc
acatcagggatttccagcagccaaggagaacagagtaacccagctcagtctcctttctct
cctcatacttcccctcacctgcctggcatccgaggcccctccccatcccctgttggctct
cccgccagtgttgctcagtctcgctcaggaccactctcgcctgctgcagtgccaggcaat
cagatgccacctcggccacccagtggccagtcggacagcatcatacatccttccatgaac
ccatcgagcattgcccaagaacgaggttacatgcagaggaacccccagatgccccagtac
agttccccccagcccggctcggccttatctccacgtcagccttctggaggacagatgcac
acaggcatgggctcctaccagcagaactccatggggagctatggtccccaggggagtcag
tatggcccacagggaggctaccccaggcagcccaactataatgccttgcccaacgctaac
taccctagtgcaggcatggctggaagcatgaaccctatgggtgctggaggtcagatgcat
gggcagcctggcatcccaccttatggcacactccctccagggagaatgagtcacgcctcc
atgggcaaccggccatatggccctaacatggccaatatgccacctcaggttgggtcaggg
atgtgtcccccaccagggggcatgaaccggaaaactcaagaaactgctgtcgccatgcat
gttgctgccaactctatccaaaacaggccaccaggctaccccaatatgaatcaagggggc
ataatgggaactggacctccctatggacaagggattaatagtatggctggcatgattaac
cctcagggacccccatatcccatgggtggaaccatggccaacaattcagcagggatggca
gccagcccagagatgatgggccttggggatgtcaagttaactccagccaccaaaatgaac
aacaaagctgatgggacacccaagacggaatccaaatccaaaaaatccagttcttctact
acaaccaatgagaagatcaccaagttgtatgagctgggtggtgagcctgagaggaagatg
tgggtggaccgttatctggccttcactgaggagaaggccatgggcatgacaaatctgcct
gctgtgggtaggaaacctctggacctctatcgcctctatgtgtctgtgaaggagattggt
ggattgactcaggtcaacaagaacaaaaaatggcgggaacttgcgaccaacctcaatgtt
ggcacttcaagcagtgctgccagctccttgaaaaagcagtatatccagtgtctctatgcc
tttgagtgcaagattgaacggggagaagacccacccccagacatctttgcagctgctgat
tccaagaagtcccagcccaaaatccagcctccttctccagctggatcagggtctatgcag
gggccacagacacctcagtcaaccagcagttccatggcagaagggggagacttgaagcca
ccaactccagcatccacaccacacagtcagatcccccccttgccaggcatgagcaggagc
aattcagtcgggatccaggatgcttttcctgatggaggtgaccccacattccagaaacgg
aattccatgactccaaaccctgggtatcagcccagtatgaatacctctgacatgatgggg
cgcatgtcctacgagccaaataaggatccttatggcagcatgaggaaagctccagggagt
gatcccttcatgtcctcagggcagggccccaacggcgggatgggggacccctacagccga
gctgccggccctgggctggcaaatgtggcaatgggaccacgacagcactatccttatgga
ggtccttatgacagagtgaggacggagcctggaataggacctgagggaaacatgggcact
ggagccccacagccgaatctcatgccttccaacccagactcggggatgtattctcctagc
cgctaccctccccagcagcagcaacagcagcaacgacatgattcctatggcaatcagttc
actcaaggcaccccttctagcagccccttccccagccagcagaccacaatgtatcagcag
cagcagcagaattacaagcggccaatggatagcacatacggccctcctgccaagcggcat
gaaggggagatgtacagtgtgccgtacagcacagggcaggggcagccccagcagcagcag
ttgcctccagcccagccccagactgccagccagcaacaagctgcccagccttcacctcag
caagatgtgtacaaccagtatggcaatgcatatcctgccactgccgctgctgctactgag
cgccgaccagcaagtggcccccagaaccagtttccattccagtttggccgagaccgtgtc
tcagcaccccctggttccagtgcccagcagaacataccaccacaaatgatgggtggcccc
atacaggcatcagctgaggttgctcagcaaggcaccatgtggcaagggcgtaatgacatg
acctacaattacaccaataggcagagcacaggctctgccccccaaggccccgcctatcat
ggtgtgaaccgaacagatgaaatgctgcatacggatcagagggctaaccatgaaggctca
tggccttcccatggcacacgtcagcccccatatggtccctctgcgcctgtgcccgccatg
acaaggccccctccttccaactaccagcccccaccaagcatgcagaatcacattcctcag
gtatccagccctgctcccctgcctcggccaatggagaaccgcacctctcctagcaagtct
ccattcctgcactctgggatgaagatgcaaaaggcagggccccctgtacctgcctcgcac
atagcacctgcccctgtgcagccccccatgatccggcgggacatcaccttcccacctggc
tctgttgaagccacacagcctgtgttgaagcagaggaggcgactcaccatgaaagacatt
ggaactccagaggcatggcgagtaatgatgtccctcaagtctgggctgctggcagagagc
acatgggcattagacaccattaacatcctgttatatgatgacaacagtatcatgaccttc
aacctcagtcagctcccagggttgctagagctccttgtggaatatttccgacgttgcctg
attgagatctttggcattttaaaggagtatgaggtgggtgacccagggcagagaacacta
ttggaccctgggagattcagcaaggcgtctagtccaacccctgtagatggggaggatgag
gaagaccttctaggtcctaaactagaggaagaagaagaggaagtagttgaaaatgatgag
gagatggccttttcaggcaaggacaaggcagcctcagagaatagtgaggaaaaacttact
agtaagtttgacaaacttccagtaaagatcgtgcagaagaatgacccgtttgtggtggac
tgctcagataagcttgggcgcgtgcaggagtttgacagtggcctgctgcactggcggatt
ggtgggggggacaccactgagcatatccagacccactttgagagcaagacagagcttctg
cctactcagcctcatatgccctgcctaccagtcacccggaaacatatcatagcaggagag
ggtacacaagggacaacagaacaagagggccccccacctgatggccccccagagaaacgg
atcacagccactatggatgatatgttgtccactcggtctagcacattgactgaggaggga
gctaagagtacagaggctaccaaggagagcagcaagtttccatttggcatcagcccagca
cagagccaccggaacatcaagatcctagaggatgaacctcacagtaaagatgagactcca
ctgtgtacccttctggactggcaggattcccttgccaagcgctgcatctgtgtctccaat
actatccgaagcctgtcatttgtgccaggtaacgactttgagatgtccaaacacccaggg
ctgctgctaatcctgggcaagctgatccttctgcatcacaagcatccagaacggaagcag
gcaccactaacttatgagaaggaggaggaacaggaccaaggggtgagctgcaacaaagtg
gagtggtggtgggactgcttggagatgctccgggaaaacaccttggtcacactagccaac
atctcggggcagttggacctctccccgtaccctgagagcatttgcctgcctgtcctggat
ggactcctacactgggcagtgtgcccttcagctgaagcccaggaccccttctccaccttg
ggccccaatgccgtcctttccccccagagactggtcttggaaaccctcagcaaactcagc
atccaggacaacaatgtggacctgatccttgccacaccccccttcagccgcctggagaag
ttgtatagcaccatggtgcgcttcctcagtgaccgaaagaacccggtatgccgggagatg
gccgtggtactgctggccaacctggcgcagggcgacagcctggcagcccgagccatcgca
gtgcagaagggcagcatcggcaacctcctgggctttctggaggacagccttgctgccaca
cagttccaacagagccaggcgagcctgctccacatgcagaacccgccctttgagccaact
agtgtggacatgatgcggcgggctgcccgtgcgctgctggccctggccaaggtggacgaa
aaccactcagagttcacgctgtacgagtcacggctgttggacatctcggtatcaccattg
atgaactcattggtttcacaagtcatctgtgatgtactgtttttgattggccagtcatga
DBGET
integrated database retrieval system
