Phyllostomus discolor (pale spear-nosed bat): 114500273
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Entry
114500273 CDS
T07739
Symbol
DDB1
Name
(RefSeq) DNA damage-binding protein 1
KO
K10610
DNA damage-binding protein 1
Organism
pdic
Phyllostomus discolor (pale spear-nosed bat)
Pathway
pdic03420
Nucleotide excision repair
pdic04120
Ubiquitin mediated proteolysis
pdic05161
Hepatitis B
pdic05170
Human immunodeficiency virus 1 infection
pdic05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
pdic00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
114500273 (DDB1)
09124 Replication and repair
03420 Nucleotide excision repair
114500273 (DDB1)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
114500273 (DDB1)
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
114500273 (DDB1)
05161 Hepatitis B
114500273 (DDB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pdic04121
]
114500273 (DDB1)
03400 DNA repair and recombination proteins [BR:
pdic03400
]
114500273 (DDB1)
Ubiquitin system [BR:
pdic04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Adoptor protein
114500273 (DDB1)
DNA repair and recombination proteins [BR:
pdic03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
114500273 (DDB1)
TCR (transcription coupled repair) factors
Cul4-CSA complex
114500273 (DDB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_RSE1_1st
Beta-prop_RIG_2nd
Beta_propel
Motif
Other DBs
NCBI-GeneID:
114500273
NCBI-ProteinID:
XP_028372724
UniProt:
A0A6J2M3D2
LinkDB
All DBs
Position
6:complement(162474310..162500545)
Genome browser
AA seq
1140 aa
AA seq
DB search
MSYNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGK
IAVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGI
IGIIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICF
VYQDPQGRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYH
NGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDL
RVELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIV
DMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPSRE
TDDTLVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVS
QEPKALVSEWKEPQGKNISVASCNSSQVVVAVGRALYYLQIHPQELRQISHTEMEHEVAC
LDITPLGDSSGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSH
YLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIY
SSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYES
PRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVSSSKLFSSSTAPHET
SFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEE
AEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELR
TECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEIL
DDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGET
STPTQGSVLFGTVNGMIGLVTSLSESWYNLLLDMQNRLNKVIKSVGKIEHSFWRSFHTER
KTEPATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKREATADDLIKVVEELTRIH
NT seq
3423 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtacaactacgtggtaacggcacagaagcccaccgccgtgaacggctgcgtgacc
ggacactttacttcagctgaagacttaaaccttctgattgccaaaaacacgagattagag
atctatgtggtcacggccgaggggctccggcccgttaaggaggtgggcatgtacgggaag
atcgccgtcatggagctcttcaggcccaagggggagagcaaggacctcctgtttatcctg
acagccaagtacaatgcctgcatcctggagtataagcagagcggtgagagcattgacatc
ataactcgagcccatggcaatgtgcaggaccggattggccgcccctctgagactggcatt
attggcatcattgatcccgagtgccggatgattggcctgcgactctatgatggccttttc
aaggtcattccactagaccgggacaataaggagctcaaggcttttaacatccgcctggag
gagttgcatgtcatcgatgtcaagttcctatatggttgccaagcccctaccatctgtttt
gtctaccaggaccctcaggggcggcacgtgaagacctatgaagtgtctctccgagagaag
gaattcaataagggcccttggaaacaggaaaacgtagaagctgaagcttccatggtgatt
gcagtcccagagccttttggaggggccatcatcattgggcaggagtcaatcacctatcac
aatggtgacaagtacctggcgattgcgcctcctatcatcaagcaaagcacaattgtgtgt
cacaatcgtgtggaccccaacggttcccgttacttgctgggagacatggagggacggctc
ttcatgctgcttttggagaaggaggagcagatggacggcaccgtcaccctcaaggacctc
cgggtagagctgctcggagagacctccattgccgagtgcctgacgtaccttgacaatggt
gttgtctttgtcgggtctcgccttggtgactcgcagctggtgaagctcaatgttgacagc
aatgaacaaggctcctatgtcgtggccatggaaacctttacaaatttgggacccattgtg
gacatgtgcgtggtggacctggagaggcaggggcaagggcagctggtcacttgctctggg
gctttcaaggaaggttccttgcggatcatccggaatggaattggaatccatgagcatgcc
agcattgacttaccaggcatcaaaggcctgtggccgctgcggtctgatcctagccgggag
actgatgacactttggtgctctctttcgtgggccagacgagagttctcatgttgaatggg
gaggaggtggaagagaccgaactgatgggttttgtggacgaccagcagactttcttctgt
ggcaacgtggcgcatcagcagctcatccagatcacttccgcatccgtgaggctcgtctct
caagaacccaaagcccttgtcagcgagtggaaggagcctcagggcaagaacatcagcgtg
gcctcctgcaacagcagccaggtggtggtagccgtgggaagggccctctactacctgcag
atccaccctcaggagctccggcagatcagccacacggagatggagcacgaggtggcctgc
ctggacatcacgccactgggggacagcagcgggctgtcccctctctgtgccatcggcctc
tggacagacatctcggcccggatcttgaagctgccctcctttgagctgctgcacaaagag
atgctgggtggagagatcatccctcgctccatcctgatgaccacctttgagagcagccac
tacctcctctgtgccttgggggatggggcgcttttctacttcgggctcaacattgagacg
ggcctgttgagcgaccgcaagaaggtgaccctgggcacgcagcccacggtactgaggacc
ttccgttctctttccaccaccaacgtcttcgcgtgctctgaccggcccactgtcatctat
agcagcaaccacaagctggtcttctccaacgtcaacctcaaggaggtgaactacatgtgt
ccccttaactcggacggctatcctgacagcctggcactggccaacaacagcaccctcacc
atcggcaccatcgacgagatccagaagctgcacattcgcaccgtgcccctctacgagtct
cccaggaagatctgctatcaggaagtgtcccagtgtttcggggtcctctccagccgcatc
gaagtccaggacacgagcgggggcaccactgccctgaggcccagtgccagcacccaggcc
ctgtcgagcagcgtcagctccagcaagctgttctccagcagtacagccccgcacgagacc
tccttcggggaagaggtggaggtgcacaacctcctcatcatcgaccagcacacctttgaa
gtgcttcacgcccaccagtttctgcagaatgagtatgccctcagcctggtctcctgcaag
ttgggcaaagaccccaacacgtacttcatcgtgggcacggccatggtgtacccggaggag
gcggagcccaagcagggtcgtattgtggtgtttcagtattcagacggaaaactgcagact
gtggccgaaaaggaagtgaaaggggccgtgtactccatggtggaatttaacgggaagctg
ttggccagcatcaatagcacggtgcggctctatgagtggaccacggagaaggagcttcgc
accgagtgcaaccactacaacaacatcatggcgctctacctgaagaccaagggcgacttc
atcctggtgggcgacctcatgcgctccgtgctgctgctcgcctacaagcccatggagggg
aacttcgaagagatcgctcgggacttcaaccccaactggatgagtgccgtggagatcttg
gatgatgacaatttcctgggggctgagaacgccttcaacttgtttgtgtgtcagaaggac
agcgctgccaccactgatgaggagcggcagcacctgcaggaggtcggtctcttccacctg
ggcgaattcgtcaatgtcttctgccacggctctctggtcatgcagaatctgggcgagact
tccacccctacgcagggctccgtgctcttcggcacagtcaacggcatgattgggctggtg
acctcactgtcagagagctggtacaacctcctgctggacatgcagaatcgactcaacaaa
gtcatcaaaagtgtgggcaagattgagcactccttctggaggtcctttcatactgagcga
aagacggagccggccactggcttcattgacggggacttgatcgagagtttcctggacatc
agccggcccaagatgcaggaggtggtggcaaaccttcagtatgacgacggcagcggaatg
aagcgagaggccaccgcagacgacctgatcaaggttgtggaggagctgacgcggatccat
tag
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integrated database retrieval system
