Phyllostomus discolor (pale spear-nosed bat): 114501525
Help
Entry
114501525 CDS
T07739
Symbol
SMARCC1
Name
(RefSeq) SWI/SNF complex subunit SMARCC1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
pdic
Phyllostomus discolor (pale spear-nosed bat)
Pathway
pdic03082
ATP-dependent chromatin remodeling
pdic04714
Thermogenesis
pdic05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
pdic00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
114501525 (SMARCC1)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
114501525 (SMARCC1)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
114501525 (SMARCC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pdic03021
]
114501525 (SMARCC1)
03036 Chromosome and associated proteins [BR:
pdic03036
]
114501525 (SMARCC1)
Transcription machinery [BR:
pdic03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
114501525 (SMARCC1)
Chromosome and associated proteins [BR:
pdic03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
114501525 (SMARCC1)
PBAF complex
114501525 (SMARCC1)
GBAF(ncBAF) complex
114501525 (SMARCC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_3
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
Chromo
DUF919
BRCT_2
SpeFL
Motif
Other DBs
NCBI-GeneID:
114501525
NCBI-ProteinID:
XP_028373917
UniProt:
A0A6J2M1J5
LinkDB
All DBs
Position
7:5719421..5822297
Genome browser
AA seq
1102 aa
AA seq
DB search
MAAAAGGGGPGTAAGAAGAGGAAVAAGLAAYRRKEGGPASKFWESPETVSQLDSVRVWLG
KHYKKYVHADAPTNKTLAGLVVQLLQFQEDTFGKHVTNPAFTKLPAKCFMDFKAGGTLCH
VLGAAYKYKNEQGWRRFDLQNPSRMDRNVEMFMNIEKTLVQSNCLTRPNIYLMPDIDLKL
ANKLKDIVKRHQGTFTDEKSKASHHIYPYPASQEDEEWLRPVMRKDKQVLVHWGFYPDSY
DTWVHSNDVDAEIEDPPIPEKPWKVHAKWILDTDVFNEWMNEEDYEVDENRKPVSFRQRI
PTKNEEPVRSPERRDRKASASARKRKHSPSPPPPAPAEPRKKSGKKGQASIYGKRRSQKE
EDEQEDLTKDMEDPTPVPNIEEVVLPKNVNPKKDSENTPVKGGTVADLDEQDEETVTAGG
KEDEDPSKGDQSRPADPGEDNVTEQTNHIIIPSYASWFDYNCIHVIERRALPEFFNGKNK
SKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLTGDVCAVMRVHAFLEQWGLVNYQVD
PESRPMAMGPPPTPHFNVLADTPSGLVPLHLRSPQVPAAQQMLNFPEKNKEKPIDLQNFG
LRTDIYSKKTLAKSKGASAGREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILH
FLRLPIEDPYLENSDASLGPLAYQPVPFSQSGNPVMSTVAFLASVVDPRVASAAAKAALE
EFSRVREEVPLELVEAHVKKVQEAARASGKVDPTYGLESSCIAGTGPDEPEKLEGAEEEK
METDADGPQPEKAEHKGDNEPDEGDKAQDCDNEKTSEKEQDSEVSEDTKSEEKEAEENKE
LTDPYKERESDVGKKKVEHEISEGNVATAAAAALASAATKAKHLAAVEERKIKSLVALLV
ETQMKKLEIKLRHFEELETIMDREKEALEQQRQQLLTERQNFHMEQLKYAELRARQQMEQ
QHGQNPPQGHQHSGAPGLAPMGAAGHPGMMPHQQPPPYPLMQHQMPPPHPPQPGQMPGPG
SMMPGQPMPGRMIPTVTANIHPPGSGPPPPGMPPMPGNILGPRVTLTAPNGMYPPPPQQP
PPPPADGVPPPPAAGPPASAAP
NT seq
3309 nt
NT seq
+upstream
nt +downstream
nt
atggccgcggcagcgggcggcggcggccctgggacggcggcgggcgccgcgggtgcgggg
ggcgcggcggtggctgcgggcctggccgcttatcggcggaaggaagggggcccggccagc
aagttttgggagagcccggagactgtatcccagctggattcggtgcgggtctggctcggc
aagcactacaagaagtatgtgcacgcggacgcgcccaccaataaaacgctggcggggctg
gtggtgcagctcctccagttccaggaagacacctttgggaagcacgtcaccaacccggcc
ttcaccaagctccctgcaaaatgtttcatggatttcaaagctggaggcaccctgtgtcac
gtccttggggctgcttacaagtataaaaatgaacagggatggcggaggtttgatctgcag
aacccatcccggatggatcgcaatgttgagatgtttatgaatattgaaaaaacattggtg
cagagcaattgtctgaccagacccaacatctacctcatgccggacatcgacctgaagctg
gccaacaaactgaaggacatcgttaagcggcatcaggggacatttacggatgagaagtca
aaagcttcccaccacatttatccgtatcctgcctcacaagaagacgaagagtggctgcgg
cccgtgatgcggaaagacaagcaggtgctggtgcactgggggttctacccggacagctac
gatacttgggtccacagtaatgatgttgatgcggaaattgaagatccaccaattccagaa
aagccgtggaaggttcatgccaaatggattttggacacggacgttttcaatgagtggatg
aacgaggaggattacgaggtggacgagaacaggaagcccgtgagcttccggcagcgcatt
ccaacgaagaatgaagagccagtcagaagcccggagaggagagacaggaaggcgtcggcc
agcgctcggaagaggaaacactcgccctcgcccccgccccccgcccccgcagagccgcgg
aagaagagcggcaagaaaggccaagcaagtatttatgggaagcgcagaagccagaaggag
gaagatgagcaagaagatcttaccaaggatatggaagacccaacaccggtacccaacata
gaggaggtggtacttccaaaaaatgtaaatccaaagaaagatagtgaaaatacacctgtt
aaaggaggaacggtggccgatctagatgaacaggacgaagagacggtcaccgcaggagga
aaggaagacgaagaccccagcaaaggcgatcagagccggcccgctgaccctggagaggat
aacgtgacggagcagaccaatcacatcatcatccccagctatgcgtcgtggtttgattac
aactgtattcacgtgatcgaacggcgtgcccttcccgagttcttcaatgggaaaaacaaa
tccaagactccagagatatacttggcatatcgaaattttatgatcgacacataccgcctg
aacccccaggaatacctgaccagcaccgcttgccggcggaacctgacgggggacgtgtgc
gcggtgatgagggttcatgcctttttggagcagtgggggcttgttaattaccaagtggac
ccagagagccggcccatggccatgggacctcctcctactcctcatttcaacgtgctggct
gacaccccctctgggctcgtgccgctgcatctccggtccccgcaggtccccgccgctcag
cagatgttaaatttccccgaaaagaacaaggaaaaaccaattgatttgcagaactttggt
ctccgtactgacatctactccaagaaaaccttagcaaagagcaaaggagccagtgctggg
cgggagtggacggagcaggagaccctgctgctcctggaggccctggagatgtacaaggac
gactggaacaaggtgtcggagcacgtcgggagccgtacgcaggatgagtgcatcctccac
ttcttgaggcttcccatcgaggacccctacctcgagaactcagacgcctccctggggccc
ctggcgtaccagcctgtccccttcagtcagtcaggaaacccggtcatgagcaccgtggcc
tttctggcgtccgtggtggaccctcgcgtggcgtctgctgcggcaaaggcggctctggag
gagttttctcgggtccgggaggaggtacccctggaattggtggaagctcacgtcaagaaa
gtacaggaagcagctcgagcctctgggaaggtggatccgacctacggcctggagagcagc
tgcatcgcaggcacgggccccgacgagccggagaagctcgaaggagcggaagaggagaaa
atggaaacggatgccgatggcccgcagcctgaaaaggcagaacacaaaggggacaatgag
ccagatgaaggggataaagcccaagactgcgacaatgagaaaaccagcgagaaggaacag
gatagtgaagttagtgaggacaccaaatcagaggagaaggaggccgaggagaacaaggag
ctcactgatccttacaaagagagagaaagtgacgtcgggaagaagaaagtggaacacgag
atttctgaaggaaacgtcgccacggccgcagcagctgctctggcctcagctgcaacgaaa
gccaagcacctggctgccgtggaagagaggaagatcaagtctctagtcgctctcctggtc
gagacgcagatgaagaaactagagatcaagctgcggcatttcgaggagctggagacgatc
atggacagggagaaggaggccctagagcagcagaggcagcagctgctcaccgaacgccag
aacttccacatggagcagctgaagtacgcggagctgcgcgcccgccagcaaatggagcag
cagcacgggcagaaccccccgcaggggcaccagcactcgggagcgccgggcctggcgccc
atgggcgccgcggggcacccgggcatgatgccgcaccagcagccgccaccctacccgctg
atgcagcaccagatgccgccgccccacccaccccagccaggtcagatgccaggcccgggc
tccatgatgcctgggcagcccatgccaggacgcatgattcccaccgttacagccaacatc
cacccccctgggagtggccctccccctcctggtatgccgccaatgccgggaaacatctta
ggaccccgggtaaccctcacggcacccaacggcatgtatccccctccgccacagcagccg
ccaccgccgccggcagatggagtccctccgcctcctgctgcaggcccgcccgcctcggcc
gcgccctag
DBGET
integrated database retrieval system
