Phyllostomus discolor (pale spear-nosed bat): 114502503
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Entry
114502503 CDS
T07739
Symbol
PALB2
Name
(RefSeq) partner and localizer of BRCA2 isoform X1
KO
K10897
partner and localizer of BRCA2
Organism
pdic
Phyllostomus discolor (pale spear-nosed bat)
Pathway
pdic03440
Homologous recombination
pdic03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pdic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
114502503 (PALB2)
03460 Fanconi anemia pathway
114502503 (PALB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pdic03400
]
114502503 (PALB2)
DNA repair and recombination proteins [BR:
pdic03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
114502503 (PALB2)
FA (Fanconi anemia) pathway
Downstream FA components
114502503 (PALB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PALB2_WD40
Beta-prop_WDR5
Beta-prop_WDR3_1st
Motif
Other DBs
NCBI-GeneID:
114502503
NCBI-ProteinID:
XP_028375299
UniProt:
A0A6J2M7J3
LinkDB
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Position
3:122710765..122736198
Genome browser
AA seq
1242 aa
AA seq
DB search
MRLEESVRISKVSWEEMLRVITVCAKVLTQERTWCFVRSESNVGWYHCLLLRDQLSSSHS
CLIGTVPCFSAHCTLSIAQYCLVLYFQLKEKLAFLKREYSKTLARLQRAQRAEKVKNCIK
KTVKEQDSLLQPEVSPQLNHSEPKTNVSSCDALQINTLLDEETGDVEPESFKSGRGPAEG
LHIQKTDDIQEYFACRVSGPDGEKRQSKLPGRRKKQQKRIFISQERESFFDTDSLILSGK
RLNKQKEINSENPETPVTKIRTKFLSPQSDIPDSQAPVTETNGGSVLILFNAKPQSNVNA
VLGESNFPMVPPHPLYTPSDSSSGPHLQHKPPKQNCELTAHSLKSISLMSPVNLEAHSKN
MTVFTGNSEVNKTVTARGQQPRSLDLEADNACSVNELTCKLPANENQNLKDQSHTEESLE
PFSNALDDRNESLHENVVLNHSSFGPEVVSPVSAENQTHSCTMPEGLLFPAEYYVRTTQQ
MSNCQRKVALEAVIQSHFNVRKKGVKNENKEATKLLNLFSEETNESITRMCDTSTGQTSS
RSPLQTLLSLTEVSSPTGPTKDDFSRKAATQPSSRRHRGKRKSICTPTSHHHELLLPTSG
ISGVNRSKEEVTLHKEKNEKAIIHGKEGHCQKEDSFSSSNNVYSALGNDACSAPSHKHEV
LNLKQLSSVLKITDFQLPDEEFGCLKLEKLKTYSAKPVEPFGSKVYGDKHLKEGKRIVLE
ELTPKQIDVEMEDLGEKLIVLPGKTHPKIPKLKSQPQQKGLSSSMLLFTPLNTITPDDDK
RPTADVCSPAFPIIGTTPDLGSQAHKVTVEVVRLTCASPLLSYGKTSESQQCHNCTSPPK
LDGMLYVSGREGQPKCNCDSGPQATPLPTESFTFQEDQLCGNICLEPWKHSIEQTEITDV
PTCDTLNPGNLQLVSKLKNPSGSCSVDVSATWWEIAGVKEPCIITACEYAVSLWKPLDIW
QWEKIYSWHFTEVPVLQIVPMPDVCNLVCVALGNLEIREIRALLCFPDAKSENQVLLSSG
NIQAVLGLTKRRLVSSSRTLCDQQIEIMTIAEDGGSKEKQFLMPIEETIQTFAEVQGMQD
ALLGTTIMNNIVIWNLKTGQLLKKIYIGDSYQASICHKAYSEMGLLFVVLSHPCAKEKEP
SGSPMFQLIVINPKTALSMGVMLYCLPQGQAGRFLEGDVKDNFAAAVLTSGTIAIWDLLL
GHCTALLPPISDQNWSFVKWSGTDSHLLAGQKDGSIFVYLIS
NT seq
3729 nt
NT seq
+upstream
nt +downstream
nt
atgaggcttgaggaatcagtaagaattagcaaagtgagctgggaggaaatgctccgggtg
ataacagtctgtgcaaaggtactgacacaagagaggacttggtgctttgtgagaagtgag
agtaatgtgggctggtaccactgcctcttgctgagggaccagctgagcagctcacactca
tgtctgataggcactgtaccctgtttctctgctcactgtactctttccattgctcaatat
tgtctggtattatacttccagttgaaggaaaaattagcattcttgaaaagggaatacagc
aagaccctggcccgccttcagcgtgcccaaagagctgagaaggttaagaattgtattaag
aaaacagtgaaagaacaagattctttgcttcagccagaagtttcaccacagctaaaccat
tcagaacctaaaactaatgtatcttcttgtgacgcattacaaatcaacacccttcttgat
gaagaaactggagatgttgagcctgagtcctttaaatctggacgtggtccagcggaagga
ttacacatacagaaaacagatgatatccaagaatattttgcctgcagggtcagtggccct
gatggcgagaaaaggcagagtaaactgccagggagaagaaagaagcaacagaagagaata
tttatttcacaagagagagaatctttctttgacactgattcacttatcctctctggaaaa
agactaaacaaacaaaaagaaatcaatagtgaaaatcctgagacacctgtaactaaaata
agaactaagtttttgagtcctcagtctgacattccagattctcaagcaccagttacagaa
actaatggagggagtgtattaattctgttcaatgccaagccacaaagcaatgtaaatgct
gtcttaggagaaagtaatttccctatggtgcccccacatcctttgtatactccctcagat
agcagtagtggtccacaccttcaacataagcctcctaaacagaactgtgagcttactgct
cacagtttaaaaagcattagccttatgtcacctgtaaacttggaggcacacagcaaaaac
atgactgtctttacaggtaactcagaggtaaataaaactgtaactgcaagaggccagcag
cctagaagtcttgacttagaagcagataatgcatgttctgtaaatgaactcacttgtaag
ttaccagcaaatgaaaaccaaaacttaaaagaccaaagtcacacagaggagtctttagaa
cctttcagtaatgcccttgatgatagaaatgaaagtcttcatgaaaatgtggttctgaat
cactcgagttttggcccagaagtagtctctcctgtttctgcagaaaatcaaacacattct
tgcactatgccagaaggccttctttttcctgcagaatattatgttagaacaacacaacaa
atgtcaaattgccagaggaaagtagccctggaggctgtaattcaaagtcacttcaatgtc
agaaagaagggggttaaaaatgaaaataaggaagctactaaacttttaaatcttttcagt
gaagaaactaacgaaagtataactaggatgtgtgacacatccacaggacaaacaagttca
agaagtcctcttcagacacttctctcattaactgaagtcagttctcccactgggcccact
aaagatgacttttctaggaaggcagctactcagccatccagtagaagacaccgaggaaaa
agaaagtcaatctgcacccctacatcacatcatcatgaactacttttgcccacttctggc
atatcaggcgttaacagatccaaggaagaagtcaccttgcacaaagagaagaacgaaaaa
gcaattattcatgggaaagaaggtcactgccaaaaagaggactccttttcttccagtaat
aatgtttattcagctttgggcaatgatgcttgcagtgccccatctcataagcatgaagtg
ttaaatttaaagcaactgtcatctgttctcaaaatcacagactttcagttacctgatgaa
gaatttggatgtcttaagcttgaaaaactgaagacctactcagcaaagccagttgagccg
tttggatcaaaagtgtatggagataagcatcttaaagagggaaaacgtattgttttggag
gaactgactcctaaacaaattgatgtagaaatggaggacttgggagagaaactgattgtt
ctaccaggaaaaacacatcctaaaataccaaagctaaaaagccagccacagcagaagggc
ctttcctcatccatgttacttttcactcctttaaatactattactcctgatgatgataag
agaccaacagcagatgtgtgttcacctgctttccccatcataggcactactcctgatctt
ggctcccaggcacacaaagtgactgtagaagttgttagactaacttgtgcttcacccctg
ctttcttatgggaaaaccagtgagagtcagcaatgccacaattgtaccagcccaccaaaa
ttagatggcatgctctatgtgtcaggaagggaaggacagcctaagtgtaactgtgattct
ggtccccaagcaacacctctccccactgagtcattcactttccaagaggatcagctctgt
ggaaatatatgcctggaaccatggaaacattccattgaacagactgaaataacagatgtt
cctacttgtgacaccttaaacccaggcaacctacaattggtttcaaaattaaagaatcct
tcaggttcctgttctgtggatgtgagtgctacgtggtgggaaatagctggtgtcaaagag
ccatgtatcataactgcttgtgaatatgcagtttctctttggaaacctctggatatttgg
cagtgggaaaaaatatattcctggcacttcacagaggttcctgtattacagatagttccc
atgcctgatgtttgtaatctggtgtgtgtggctttgggaaatttggaaatcagagaaatc
agggcattactttgtttccctgatgctaaaagtgaaaaccaagtgcttctgagttctgga
aatatacaagctgtgcttggactgacaaagaggaggctagtcagtagcagcaggaccctt
tgtgatcaacaaatagagatcatgacaattgcagaagacggagggagcaaagaaaaacag
tttttgatgcccatcgaggagactatacaaacttttgctgaagttcaagggatgcaggat
gctctgcttggtaccactataatgaacaacattgttatttggaatttaaaaactggtcag
ctcctgaaaaagatctacattggtgattcctaccaagcatccatctgtcacaaagcctat
tctgaaatgggactcctttttgttgttctgagtcatccgtgtgccaaagagaaggagcca
tcgggaagccccatgtttcagcttattgtgatcaaccccaagacagccctgagcatgggt
gtgatgctctactgtcttcctcaagggcaggctgggaggttcctggaaggtgatgtgaag
gataatttcgcagcagcagtgttgacttctggaacaattgccatttgggacttacttcta
ggtcactgcactgctcttcttccacccatctctgaccagaactggtcttttgttaaatgg
tcaggtacagattctcatttgctggctggacaaaaagatggaagcatatttgtgtatcta
ataagttag
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