KEGG   Phyllostomus discolor (pale spear-nosed bat): 114503189
Entry
114503189         CDS       T07739                                 
Symbol
PRPF4
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4 isoform X1
  KO
K12662  U4/U6 small nuclear ribonucleoprotein PRP4
Organism
pdic  Phyllostomus discolor (pale spear-nosed bat)
Pathway
pdic03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pdic00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    114503189 (PRPF4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pdic03041]
    114503189 (PRPF4)
Spliceosome [BR:pdic03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    114503189 (PRPF4)
SSDB
Motif
Pfam: Beta-prop_WDR3_1st WD40_Prp19 Beta-prop_WDR5 WD40 Beta-prop_THOC3 WD40_CDC20-Fz WD40_Gbeta Beta-prop_WDR3_2nd WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_WDR36-Utp21_2nd WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd Beta-prop_WDR75_1st WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_1st ANAPC4_WD40 PRP4 Beta-prop_EML WDR90_beta-prop_4th WD40_MABP1-WDR62_1st NBCH_WD40 Beta-prop_Aladin Beta-prop_TEP1_C Beta-prop_DCAF4 Beta-prop_EIPR1 Beta-prop_WDR41 Beta-prop_SCAP Beta-prop_IFT122_1st Beta-prop_Vps41 Beta-prop_RIG_2nd WD_LRWD1 Beta-prop_IFT140_1st WD40_like Ge1_WD40 Beta-prop_WDR35_TULP_N Beta-prop_WDR11_1st
Other DBs
NCBI-GeneID: 114503189
NCBI-ProteinID: XP_028376442
UniProt: A0A6J2M8X5
LinkDB
Position
3:197488023..197504429
AA seq 522 aa
MASTRTSSTQATKTKAPDDLGAAVVKKPHIYYGSLEEKERERLAKGESGILGKEGLKAGI
EAGNINITSGEVFEIEEHISERQAEVLAEFERRKRARQINVSTDDSEVKACLRALGEPIT
LFGEGPAERRERLRNILSVVGTDALKKTKKDDEKSKKSKEEYHQTWYHEGPNSLKVARLW
IANYSLPRAMKRLEEARLHKEIPETTRTSQMQELHKSLRSLNNFCSQIGDDRPISYCHFS
PNSKMLATACWSGLCKLWSVPDCNLLHTLRGHNTNVGAIVFHPKSTVSLDQKDVNLASCA
ADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEEILH
QEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGY
HIATGSGDNTCKVWDLRQRRCIYTIPAHHNLVTGVKFEPIHGNFLLTGAYDNTAKIWTHP
GWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLWMAE
NT seq 1569 nt   +upstreamnt  +downstreamnt
atggcttccacacgaacttcctccacgcaggcaaccaaaactaaggcaccggatgacttg
ggggctgctgttgtgaagaaaccacacatctactatggaagcttggaagaaaaggagagg
gagcgtctggccaaaggagagtctgggattttgggaaaagaaggacttaaagcaggaatt
gaagcagggaatattaacataacctctggggaagtgtttgaaattgaagagcacatcagt
gagcgacaggctgaagtattggccgagttcgagagaaggaagcgagcccggcaaatcaac
gtttccacagacgactcggaggtcaaggcttgcctgagagccttgggggagcccatcaca
ctttttggagagggtcctgctgaaagaagagaaaggttaagaaatatcctctcagtggtc
ggcactgatgccttaaaaaagaccaagaaagatgatgagaaatctaagaagtccaaagaa
gagtatcaccagacctggtaccatgaagggccaaacagcctgaaggtggctagactatgg
attgctaattactcactgcccagggcaatgaaacgcttggaggaggcccgtctgcataaa
gagattcctgagacaaccaggacctcccagatgcaggagctgcacaaatctctccggtct
ctgaataatttctgcagtcagattggggatgatcggcctatctcctactgtcactttagt
cccaattccaaaatgctggccacggcctgttggagtgggctttgcaagctctggtccgtt
cctgattgcaacctccttcacacccttcgaggccataacacaaacgtaggagcaattgta
ttccatccgaaatccactgtctccttggaccaaaaagatgtcaatctggcctcttgtgct
gctgatggttccgtgaaactttggagccttgacagtgatgaaccagtggcagatattgag
ggccatacagtgcgtgtggcccgtgtaatgtggcatccatcaggacgtttcttgggtacc
acctgctatgaccgctcgtggcgcctgtgggatttggaggcgcaagaggagatcctgcac
caggagggccacagcatgggcgtgtacgacattgccttccatcaagatggctctttggct
ggcactgggggcctggatgcatttggtcgcgtttgggacctgcgcacaggacgttgcatc
atgttcctagaggggcacctgaaggaaatctacgggataaatttctcccccaacggctac
cacattgctactggcagcggtgacaacacctgcaaagtgtgggaccttcgacagcggcgt
tgcatctacaccatccctgcccatcataacttagtgactggtgtcaagtttgaacctatc
catgggaatttcttgctcactggtgcctatgataacacagccaagatctggacccaccca
ggctggtccccgctgaagactctggctggccacgaaggcaaagtgatgggcctcgacatc
tcttctgacgggcagctgatagccacttgctcatatgacaggaccttcaagctctggatg
gcggagtag

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