Phyllostomus discolor (pale spear-nosed bat): 114503980
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Entry
114503980 CDS
T07739
Symbol
LIG3
Name
(RefSeq) DNA ligase 3
KO
K10776
DNA ligase 3 [EC:
6.5.1.1
]
Organism
pdic
Phyllostomus discolor (pale spear-nosed bat)
Pathway
pdic03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pdic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
114503980 (LIG3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pdic03400
]
114503980 (LIG3)
Enzymes [BR:
pdic01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
114503980 (LIG3)
DNA repair and recombination proteins [BR:
pdic03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
114503980 (LIG3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
LIG3_BRCT
zf-PARP
DNA_ligase_A_C
BRCT_2
RNA_ligase
SDE2_2C
Synaptonemal_3
mRNA_cap_enzyme
Motif
Other DBs
NCBI-GeneID:
114503980
NCBI-ProteinID:
XP_028377381
UniProt:
A0A6J2MDJ8
LinkDB
All DBs
Position
8:complement(109343232..109364108)
Genome browser
AA seq
1009 aa
AA seq
DB search
MTLAFKILFPATFRALCRKEPCLFRKRLWTDVKQFSRWPETDRLHGRRLLQKREPFLSFQ
SGRLRPRAARLVSSPGSHAGLCGEPCEMAEQRFCVDYAKRSTAGCKKCKEKIVKGVCRIG
KVVPNPFSESGGEMKEWYHVKCMFEKLERARATTKKIEDLTELEGWEELEDGEKEQISQH
IADLSSKAGGTPKKKAVVQARLTATGQVTSPGKGPSVAPGTHPRKFSGFAARPNSSGEAC
PSPTPKRSLSSSKCDPKHRDCLLREFRKLCATVAENPSYNTKTQIIQDFLRKGSAGDGFH
GDVYLTVKLLLPGVVKSVYNLNDKQIVKLFSRIFNCNPDDMARDLEQGDVSETIRVFFEQ
STSFPPAAKSLLTIQEVDEFLLRLSGLSKEDEQQQALQDIASRCTANDLKCIIRLIKHDL
KMNSGAKHVLDALDPNAYEAFKASRNLQDVVERVLHNEQEVEKEPGRRRTLSVQASLMTP
VQPMLAEACKSIEYAMKKCPNGMFSEIKYDGERVQVHKSGDHFSYFSRSLKPVLPHKVAH
FKDYIPQAFPGGHSMILDSEVLLIDNQTGKPLPFGTLGVHKKAAFQDANVCLFVFDCIYF
NEVSLMDRPLCERRKFLHDNMVEIPNRIMFSEMKRVSKASDLVDMINRVIREGLEGLVLK
DVKGTYEPGKRHWLKVKKDYLNEGAMADTADLVVLGAFYGQGSKGGMMSIFLMGCYDPSS
QKWCTVTKCSGGHDDATLARLQKELDMVKISKDPSKIPSWLKVNKIYYPDFIVPDPKRAA
VWEITGAEFSKSEAHTADGISIRFPRCTRIRDDKDWKSATNLPQLKELYQLSKERADFTV
VAGDEGSSPAGGSSGENEGASGPSPKARASPEQPPTSAKKAQGKLRHSGSGGGPTLAAEP
SAVRGAERPGVKTPVKVGEKRKASDEIPCPAKVLLDIFSGVRLYLPPSTPDFSRLRRYFV
AFDGDLVQEFDVASATHVLGGGDKNPEAQQVSPEWIWACIRKRRLVAPC
NT seq
3030 nt
NT seq
+upstream
nt +downstream
nt
atgactttggcgttcaagatcctcttcccggcgaccttccgcgcgctctgccgtaaagaa
ccgtgcctgttccggaaacgcctctggactgacgtaaaacagttcagccggtggccagaa
acagatcggcttcatgggcgccgcctcctgcagaagagagagccatttctgtccttccaa
agcggccgtctgagaccgcgcgccgcccgcctcgtctcctcgccagggtcgcatgcggga
ctctgcggcgagccctgcgagatggccgagcagcgcttctgtgtggactatgccaagcgc
agcacggctggctgcaagaaatgcaaggagaagatcgtgaagggcgtgtgccgcatcggc
aaagtggtgcccaaccccttctccgagtccgggggggagatgaaagagtggtatcacgta
aagtgcatgtttgagaagctggagcgggcccgggccaccaccaagaagatcgaggacctc
acggagctggaaggctgggaagagctggaagacggcgagaaggagcagataagccagcac
atagcagatctgtcttccaaagcgggaggcacgcccaagaagaaagccgtcgtgcaggca
aggctcacggccaccggccaggtgacgtctccggggaaagggccttcagtggcccccggc
acccacccccggaagttttctggctttgcagccaggcccaacagctccggggaggcctgc
ccaagccccacgccgaagagaagcctctcctcgagcaagtgcgaccccaagcacagggac
tgcctgctgcgcgagtttcggaagctgtgcgccacggtggccgagaaccccagctacaac
acgaagacccagatcatccaggacttcctccggaagggctccgcgggagatggtttccat
ggtgacgtgtacctcacggtgaagctgctgctacccggtgttgttaagagtgtttacaac
ctgaacgataagcagattgtgaagcttttcagccgcatctttaactgcaacccggacgac
atggctcgagacctggaacagggcgacgtgtcggagaccatccgggtcttcttcgaacag
agcacgtccttcccgcccgccgccaagagcctgctcaccatccaggaggtggacgagttc
ctgctgcggctctccgggctcagcaaggaggacgagcagcagcaggccctgcaagacatc
gcctccaggtgcacagccaacgacctcaaatgcatcatcaggctgatcaagcacgacctg
aagatgaactcaggtgccaaacacgtgttagacgccctcgaccccaatgcctacgaagcc
ttcaaagcctcgcgcaacctgcaggacgtggtggagcgggtcctgcacaatgagcaggag
gtggagaaggagccgggccgcaggcggaccctcagcgtgcaggcctccctgatgaccccg
gtgcagcccatgctggccgaggcctgcaagtccatcgagtacgcgatgaagaagtgtcct
aacggcatgttctcggaaatcaagtacgacggggagcgcgtgcaggtgcacaagagtggg
gaccacttcagctacttcagccgcagcctcaagcccgtcctgccgcacaaggtggcccac
ttcaaggactacatcccccaggctttcccggggggccacagcatgatcctggactcggag
gtgctcctgatcgacaaccagacgggcaagccgctgcccttcgggacgctgggcgtgcac
aagaaagccgccttccaggacgcgaacgtctgcctgtttgtcttcgactgtatctacttc
aacgaggtcagcttgatggacaggcctctgtgcgagcggcgcaagttccttcacgacaac
atggtggagatccccaaccggatcatgttctcggaaatgaagcgcgtgtccaaagcgtcg
gacctggtcgacatgatcaaccgcgtgatccgggaggggctggaggggctggtgctgaag
gacgtgaagggcacctatgagcctggaaagcggcactggctgaaagtgaagaaagactac
ttgaacgagggggccatggctgacacagctgacctggtggtccttggggccttctacggg
caggggagcaaaggtggcatgatgtccatcttcctcatgggctgctacgacccgagcagc
cagaagtggtgcacggtcaccaagtgctcggggggccacgacgacgcgacgctggcccgc
ctgcagaaggagctggacatggtgaagatcagcaaggaccccagcaagatccccagctgg
ctgaaggtcaacaagatctactaccctgacttcatcgtcccagacccaaagagagccgcc
gtgtgggagatcacaggggccgagttctccaagtccgaggcgcacacggccgatggcatc
tccatccgcttccctcgctgcacccgaatccgggacgataaggactggaaatcggccact
aacctcccccaactcaaggagctgtaccagctgtccaaggagagggcggacttcaccgtg
gtggccggggacgaggggagctcccccgcggggggcagcagcggggagaacgagggggcc
tcggggccgtccccgaaggccagagcctccccggagcagccccccaccagtgccaagaag
gcccaggggaagctgcgtcactccggcagcggaggcggccccacgctggctgcagagcct
tccgctgtgagaggggcagagaggccgggcgtgaagactcctgtgaaggtgggagagaag
cgcaaggcctctgacgagatcccgtgcccggcgaaagtgctgctggacatcttctcgggg
gtgcggctctacctgccgccctccacacccgacttcagccgtctcaggcgctactttgtg
gcattcgatggggacctggtccaggagtttgacgtggcctcggccacacatgtgctgggc
ggcggggacaagaaccctgaggcccagcaggtctccccagagtggatttgggcttgtatc
cggaaacggagactggtcgctccctgctag
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