Phyllostomus discolor (pale spear-nosed bat): 114504629
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Entry
114504629 CDS
T07739
Symbol
HDAC6
Name
(RefSeq) histone deacetylase 6 isoform X1
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
pdic
Phyllostomus discolor (pale spear-nosed bat)
Pathway
pdic04613
Neutrophil extracellular trap formation
pdic05014
Amyotrophic lateral sclerosis
pdic05034
Alcoholism
pdic05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
pdic00001
]
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
114504629 (HDAC6)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
114504629 (HDAC6)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
114504629 (HDAC6)
09165 Substance dependence
05034 Alcoholism
114504629 (HDAC6)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pdic01009
]
114504629 (HDAC6)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdic03019
]
114504629 (HDAC6)
04131 Membrane trafficking [BR:
pdic04131
]
114504629 (HDAC6)
03036 Chromosome and associated proteins [BR:
pdic03036
]
114504629 (HDAC6)
Enzymes [BR:
pdic01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
114504629 (HDAC6)
Protein phosphatases and associated proteins [BR:
pdic01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
114504629 (HDAC6)
Messenger RNA biogenesis [BR:
pdic03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
114504629 (HDAC6)
Membrane trafficking [BR:
pdic04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
114504629 (HDAC6)
Chromosome and associated proteins [BR:
pdic03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
114504629 (HDAC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
114504629
NCBI-ProteinID:
XP_028378190
UniProt:
A0A6J2MDP3
LinkDB
All DBs
Position
X:31906782..31925170
Genome browser
AA seq
1150 aa
AA seq
DB search
MTSTGQDSTTTRQRRSRHNPHSPPLDSSISKPGVKKGAGLRSSPKLAEVKKKGRMKKLSQ
AAEQDLIVGFQGLDLNLEAKTLPGTGLVFDEQLNEFHCLWDDSFPEGPERLHAIKEQLIR
EGLLDRCVSFQARFAEKEELMLVHSLEYIDLMETTQYMNEGELRVLADTYDSVYLHPNSY
TCACLASGSVLRLVDAVLGAEIQNGMAIIRPPGHHAQHSLMDGYCMFNHVAVAARYAQVK
HRIQRVLIVDWDVHHGQGTQFTFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTIGFGQGQ
GYTINVPWNQVGMRDADYIAAFLRVLLPVALEFQPQLVLVAAGFDALQGDPKGEMATTPA
GFAQLTHLLMGLAGGRLILSLEGGYNLRSLAEGVSASLHTLLGDPCPMLESPGAPCASAL
SSLSCTLEALEPFWETLMRSDDTLEGDHVEGYNVEEEEEGPWPPQALPILMWPVLQARTG
LVYDQRMMDHYNLWDNHHPEIPQRVSRIMCRLEELGLAGRCLTLPARPATDAELLTCHSA
EYVGRLRATEKMKTRELHRESANFESIYICPSTFACAQLATGASCCLVEAVLAGEVLNGI
AVVRPPGHHAEQDAACGFCFFNSVAVAARHAQAISGHALRILIVDWDVHHGNGTQHIFEE
DPSVLYISLHRYDHGTFFPMGDEGASNQVGRSAGTGFTVNVAWNGPRMGDSEYLAAWHRL
VLPIAYEFNPELVLVSAGFDAAWRDPLGGCQLSPEGYAHLTHLLMGLAGGRIILILEGGY
NLTSISESMAACTRTLLGDPPPLLTLSRPPLSGALASITETIQVHRRYWRSLRATKVEDK
EGPFSSMSVTKEAIQPANPGSTERLTMLEGSNLDAGMGKATPAPSVQESIPAQTNSETVV
VQLTKDQSPEAATGGATLDQTTSEAATLDQTTSEAASGGATLDQTTSEKPVGGDVLIQTP
QASCANSQTPPTSPVQGATPQISHSPLVGNLRTLELGNKAQEAPESQIAEEERLLGEIAG
DQNIDDSMQAFGDTDQAMFYAVTPLLWCPHLVAVCPIPEGGLDVSQPCQECGALQENWAC
LSCYEVYCSRYINAHMLQHHESSGHPLVLSYVDLSTWCYGCQAYVHHQALLDVKNIAHQN
KFGEDMPHSH
NT seq
3453 nt
NT seq
+upstream
nt +downstream
nt
atgacctccaccggccaggactccaccacaaccaggcagcgaagaagtaggcacaaccca
cactcgcccccccttgactccagcatatcgaagccaggtgttaagaagggtgctggactc
cgctccagccccaaactagcggaggtaaagaagaaaggaagaatgaagaaactcagccaa
gcagcagagcaagacctgattgtggggtttcaagggctggatctgaaccttgaggccaag
acactgcctggtactggcttggtgtttgatgagcagctaaatgaattccactgcctctgg
gatgacagcttccctgaaggcccagaacggctccatgccatcaaggagcaactgatccga
gagggcctcctagaccgctgtgtgtcctttcaggcccggtttgctgaaaaggaggagctg
atgttggttcacagcctagaatacattgatctgatggagacgacccaatacatgaatgag
ggagaactccgtgtcctagcagacacctatgactcagtttatctgcatccgaactcatac
acctgtgcctgcctggcttcaggctctgtcctcaggctggtggatgcggtcctcggggcg
gagatccagaatggcatggccatcatcaggcctcctggacaccacgcccagcatagtctt
atggatggatattgcatgttcaaccatgtggctgtggctgctcgctacgctcaagtgaag
caccgcattcagagggtccttattgtggattgggatgtgcaccatggtcaaggaacacag
ttcacttttgaccaggaccccagtgtgctctatttttccatccatcgctatgagcagggt
cggttctggccccacctgaaggcctctaactggtccaccataggttttggccaaggccag
ggatataccatcaatgtgccttggaaccaggtggggatgcgagatgccgactacattgct
gctttcctgcgagtcctgctgcctgtcgcccttgagttccagccccagctggtcctggtg
gccgctggatttgatgccctccaaggagaccccaagggtgagatggctaccactccagca
gggtttgcccagctaacccacctgctcatgggtctggcaggaggcaggctgatcctgtct
ctggagggtggctacaaccttcgctccctggctgagggtgtcagtgcctctctccacacc
cttctgggtgacccttgccccatgctggagtcccctggtgccccctgtgcaagtgccctg
tcatcgttgtcctgtactctggaagccctggagcccttctgggagacacttatgagatca
gatgacaccctggagggagaccacgtggaggggtacaacgtggaggaggaagaggaggga
ccatggccaccccaagcgctcccaatcctgatgtggccagtgttgcaggctcgcacaggg
ctggtctatgaccagcggatgatggatcactataacttgtgggacaaccaccaccccgag
ataccccagcgtgtctcccggatcatgtgccgtctggaggagctgggccttgccgggcgc
tgtctcaccctgcctgcacggcctgccacagatgctgagctgctcacctgccatagtgct
gagtatgtgggtcgtctacgggccacagagaaaatgaaaacccgggagctgcaccgcgag
agtgccaactttgagtccatctacatctgtcccagcacctttgcctgcgcacagctggcc
actggtgcctcatgctgtcttgtggaagctgtgctggcaggagaggttttgaatggcatt
gccgtggtgcgtcctcccggccaccacgcagagcaggatgctgcttgcggtttctgcttt
ttcaattctgtggctgtggctgctcgccatgcccaggccatcagtgggcatgcactgcgg
atcctgattgtggactgggatgtgcatcatggtaatggaactcagcacatatttgaggag
gaccccagtgtgctctacatttccctgcaccgctatgatcatggcaccttctttcccatg
ggggatgagggcgccagcaaccaggtgggccggtctgcaggcacgggctttacagtcaat
gtggcgtggaatggtcctcgcatgggtgactccgagtacctggctgcttggcatcgtctg
gtgctccccattgcctatgagtttaacccagaactggtgctggtctcagctggctttgat
gccgcatggagagacccactggggggctgccagctgtcacccgagggctacgcccacctc
acccacctgctgatgggccttgccgggggccgcattatcctaatcctggagggtggctat
aacctgacatccatctcggagtccatggctgcctgtactcgcaccctccttggggacccg
ccacccctgctcaccctgtcacggcccccactatcaggggccctggcctcaatcactgag
accatccaagtccatcgcagatactggcgcagcttgcgggccacaaaagtcgaagacaag
gaaggacccttcagttctatgtcagtcaccaaggaggcaatccaaccagccaatcctgga
tcaacggagaggctgaccatgctagaagggtccaatctggatgcaggcatggggaaggct
accccagcaccctctgtgcaagagtccattccagcccagactaactcagagacagttgtg
gtacagctcactaaggaccagtctccagaggcagccacagggggagccacgctggaccag
accacctcagaggcagccacactggaccagactacctcagaggcagcctcagggggagcc
acgctggaccagaccacctcagagaagcctgtgggaggagatgtgctaattcaaacccct
caagcctcatgtgctaacagccagactcctccaacctcacctgtgcaaggagccacaccc
cagatatcccacagtccgctggttgggaatcttaggaccttggaactaggcaacaaggct
caggaggccccagagtctcagattgcagaagaggagaggctactaggagagatagctgga
gatcagaacatagatgattcaatgcaggcctttggggacactgaccaggctatgttttat
gctgtgacaccactgctctggtgtccccatttggtggcagtatgccccattcctgaagga
ggcctggatgtgagccaaccttgtcaggaatgtggagcactccaggagaactgggcatgt
ctgtcttgctacgaggtctactgcagccgttacatcaatgcccatatgctccagcaccac
gaaagctcaggacacccactagtcctcagctacgttgacctgtctacctggtgttatgga
tgtcaggcctatgttcaccaccaggctctcctagatgtgaagaacatcgcccaccagaac
aagtttggggaagacatgccccactcacactaa
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integrated database retrieval system
