Phyllostomus discolor (pale spear-nosed bat): 114504819
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Entry
114504819 CDS
T07739
Name
(RefSeq) LOW QUALITY PROTEIN: polyadenylate-binding protein 1-like
KO
K13126
polyadenylate-binding protein
Organism
pdic
Phyllostomus discolor (pale spear-nosed bat)
Pathway
pdic03015
mRNA surveillance pathway
pdic03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pdic00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
114504819
09123 Folding, sorting and degradation
03018 RNA degradation
114504819
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdic03019
]
114504819
03041 Spliceosome [BR:
pdic03041
]
114504819
Messenger RNA biogenesis [BR:
pdic03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
114504819
mRNA cycle factors
Stress granule specific factors
114504819
Spliceosome [BR:
pdic03041
]
Complex C
Other components
Complex C specific factors
114504819
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_5
RRM_occluded
RRM_Nup35
RBD_DEAH11
RRM_3
RBD_RDR6
POP1_C
Motif
Other DBs
NCBI-GeneID:
114504819
NCBI-ProteinID:
XP_035873000
UniProt:
A0A7E6D156
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All DBs
Position
X:1447167..1449777
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AA seq
650 aa
AA seq
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MALSNPVEMDTCTSSYPSTSLYVGDLHPEVTEAVLYSKFSPAGPILSIRVCRDAITGHSL
GYGYVNFCRPEDAKCALNTMNFDIINGNPIRIMWCQRDPSLRKSGVGNIFVNHLDKSIDH
KVLYDMFSDFGNILSCKVICDENGSKGHGFVHFETQEAAQKAIENMNGKLIHNRKIYVGR
YKSPNQREVERRDRAKEFTNVYIKNFGESVNDERLEDLFGKFGPILSVKVMTDESGKSKG
FGFVRFQCHEDAQKAVEEMDGKELDNTTIYVSRAQRKKERQKELQQKLDEIKQNRHNQDH
SVNLYVKNLADDIDDERLFKEFSSFGTVTRAKVMMKDGQPKGFGFVCFSSREEATKAVAE
MNGKFLSTKPLYVSFAQYREERQAHLATYYMQRMPAVTAMPNPEINPYQAAPPGSLMPAV
PQAADWAAYSPVGQPTQLTPSLHCVDQGARPHPFQNMPNAIGPATPNPPFSTMRPASSQL
PQVISTEPQCVANTATATVGPPPATAATSATTAVRTILRYEYTEGVCNPRQLNTQPQATI
KPPAVRVQNETSLIASRLASAPPQQQKQILGKWLFPLIQAMQPTLANKITGMVLEMDNSE
LLHMLESPESLRSKVDEAVAVLEACQAQGAXQKAINNATMVPILKLTVDY
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atggccctgtcaaatcctgtcgagatggacacctgcacatccagctacccctcgacctcg
ctgtacgtaggagacctacacccggaggtgaccgaggcagtgctctacagcaagtttagc
ccagccgggcccatcctctccatccgggtctgcagggatgccatcaccggccactccttg
ggctacgggtatgtgaacttttgtcgaccagaggacgcgaagtgtgctctgaacacaatg
aattttgatattataaatggcaacccaattcgcatcatgtggtgtcaacgtgacccatca
cttcgcaagagtggtgtgggcaacatattcgttaatcatttagacaaatccattgatcat
aaagtactgtacgatatgttttctgattttggtaacatcctttcgtgtaaggtgatttgt
gatgaaaatggttccaagggtcatggatttgtacattttgagacacaggaagcagctcaa
aaagctattgaaaacatgaatggcaagcttatacataatcgcaaaatatatgtggggcga
tataagtctcctaaccaacgagaggtagagcgcagagatagggccaaagagttcaccaac
gtttacatcaaaaattttggggagagtgtaaatgatgagcgccttgaggatctctttggc
aaatttggacctatcttaagtgtcaaagtaatgactgatgaaagtgggaaatccaaaggt
tttggatttgtaaggttccaatgccatgaagatgcacagaaagctgtggaagagatggat
gggaaagagcttgataatacaacaatttatgtttctcgagctcagagaaaaaaggaaagg
cagaaagaacttcaacagaaattagatgagattaagcaaaataggcacaaccaagaccac
agtgttaacctttatgtgaaaaatcttgctgatgatattgatgatgaacgtctctttaaa
gagttctcttcatttggtacagtcactagagcaaaggttatgatgaaggacggtcaaccg
aaaggttttggttttgtatgtttctcttcccgggaagaagccactaaagcagtagcagaa
atgaatggtaaatttttgtctaccaagccattgtatgtatcttttgctcagtacagagaa
gaacgccaagctcacctcgctacctactacatgcagagaatgccagctgtgacagctatg
cccaacccagaaatcaacccctaccaggcagcacctccaggttccttgatgccagctgtc
ccgcaggctgcagactgggctgcatactctcctgttggccaacctactcaactaacacca
agtcttcactgtgtcgatcagggtgccagacctcatccattccaaaatatgcccaatgct
attggcccagccactcctaatccaccattcagtaccatgagaccagcttcttcacagctt
ccacaagtcatctcaacggagccacagtgtgttgctaacacagcaacagcgacagtaggt
ccacctcctgcaactgctgccacttcagctactactgctgtccgcaccattctacggtat
gaatatactgaaggagtctgcaatcctcgacaacttaatacacagccacaagctaccatt
aagccgcctgctgttcgtgtacaaaacgagacatctttaattgcttccaggctggcatct
gcccctcctcaacagcaaaagcaaattttgggcaaatggctatttcctctaattcaagcc
atgcaacctactcttgctaataaaattactggcatggtcttggagatggataattcagaa
cttcttcacatgctggagtctccagagtctctccgttctaaagttgatgaagctgtagct
gtactagaagcctgccaggctcaaggggctnatcagaaagccattaacaatgccacaatg
gttccaattttaaaattgactgttgactattga
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