Phyllostomus discolor (pale spear-nosed bat): 114505002
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Entry
114505002 CDS
T07739
Symbol
UPF3B
Name
(RefSeq) regulator of nonsense transcripts 3B isoform X1
KO
K14328
regulator of nonsense transcripts 3
Organism
pdic
Phyllostomus discolor (pale spear-nosed bat)
Pathway
pdic03013
Nucleocytoplasmic transport
pdic03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pdic00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
114505002 (UPF3B)
03015 mRNA surveillance pathway
114505002 (UPF3B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdic03019
]
114505002 (UPF3B)
Messenger RNA biogenesis [BR:
pdic03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
114505002 (UPF3B)
mRNA cycle factors
P-body specific factors
114505002 (UPF3B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg4_UPF3
RRM_1
Motif
Other DBs
NCBI-GeneID:
114505002
NCBI-ProteinID:
XP_028378652
UniProt:
A0A6J2MF41
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All DBs
Position
X:complement(70982831..71002539)
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AA seq
482 aa
AA seq
DB search
MKEEKEHRPKEKRVTLLTPPGATGSGGGASGDSAKGEDKQDRNKEKKEALSKVVIRRLPP
TLTKEQLQEHLQPMPEHDYFEFFSNDTSLYPHMYARAYINFKNQEDIILFRDRFDGYVFL
DNKGQEYPAIVEFAPFQKAAKKKTKKRDTKVGTIDDDPEYRKFLESYAADNEKMTSTPET
LLEEIEAKNRELIAKKTTPLLSFLKNKQRMREEKREERRRREIERKRQREEERRKWKEEE
KRKRKDIEKLKKIERVPERDKLKEEPKIKVHRFLLQAVNQKNLLKKPEKDEKELDKREKA
KKLDKENLNDERGSGQSCTLPKRSDSEFKDEKPKRPEDESVRDYRERERDYERDQERILR
ERERLKRQEEERRRQRERYEKEKAFKRKEEEMKKEKEALRDKGKKNESTESVGSSEKTEK
KEEVVKRDRIRNKDRPAMQLYQPGARSRNRLCPADDSTKTGDSTIEKKQESGISHRKEGG
EE
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaagagaaggagcacaggcctaaggagaagcgagtaacccttttgactcccccg
ggggccacaggcagcggcggaggggcttcaggggacagcgccaaaggggaagataagcag
gatcggaacaaggagaagaaagaggccctgagcaaggtggtaattcggagattacctccc
actttgaccaaggagcagcttcaggaacatcttcagcctatgcctgagcatgattatttt
gagtttttttctaatgatactagtttgtatcctcatatgtatgcaagagcatacatcaac
tttaaaaaccaagaggacattattttgttcagggatcgctttgatggttatgtattcctt
gacaataaaggtcaggaataccctgcaatagtagaatttgcaccttttcaaaaagctgca
aaaaagaagactaagaaaagggataccaaagttgggactatcgatgatgatccagaatat
agaaaatttttggaaagttatgctgcagataatgagaaaatgacatctactccggagaca
ctgctagaggaaatagaagctaaaaatagagaactaatagctaaaaagacaaccccacta
ttgagcttcctgaaaaacaagcagagaatgagagaagaaaaaagagaagaaagacggaga
cgagaaatagaaagaaaaagacaaagagaagaagagaggaggaaatggaaagaagaagag
aaacgaaaaaggaaagatatagaaaagctaaagaagatagaaagagttccagaaagggac
aaattaaaggaagaaccaaagattaaggtacacaggtttctgttacaagctgtgaatcag
aaaaatctgctcaagaagccagaaaaagatgaaaaagaattggacaaaagagaaaaagcc
aagaaattggacaaagagaatctgaatgatgaaagaggcagtgggcaaagttgcacattg
cccaaacgttctgatagtgaatttaaagatgagaagcctaagagacctgaagatgaaagt
gtcagagactaccgggagagggaacgggattatgaacgagatcaagagcgcatacttcgg
gaacgagagagactgaagcggcaagaagaagagcgccggaggcagagggagcgctatgag
aaggagaaggcatttaaaagaaaggaagaagaaatgaaaaaagagaaagaagcactgcgg
gataaaggaaagaagaatgaaagtacagaatcagtaggcagctcagaaaaaactgaaaag
aaagaagaagtggttaaaagggaccgcattagaaacaaggatcgcccagcaatgcagctt
taccaaccaggagctcgaagccgaaatcgactttgtcccgctgatgacagcaccaagact
ggtgactcaacaatagaaaaaaagcaggaaagtggtattagccatagaaaagaaggagga
gaggagtga
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