Phyllostomus discolor (pale spear-nosed bat): 114505221
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Entry
114505221 CDS
T07739
Symbol
PABPC5
Name
(RefSeq) polyadenylate-binding protein 5
KO
K13126
polyadenylate-binding protein
Organism
pdic
Phyllostomus discolor (pale spear-nosed bat)
Pathway
pdic03015
mRNA surveillance pathway
pdic03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pdic00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
114505221 (PABPC5)
09123 Folding, sorting and degradation
03018 RNA degradation
114505221 (PABPC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdic03019
]
114505221 (PABPC5)
03041 Spliceosome [BR:
pdic03041
]
114505221 (PABPC5)
Messenger RNA biogenesis [BR:
pdic03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
114505221 (PABPC5)
mRNA cycle factors
Stress granule specific factors
114505221 (PABPC5)
Spliceosome [BR:
pdic03041
]
Complex C
Other components
Complex C specific factors
114505221 (PABPC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_5
RRM_7
RRM_10
RBD_DEAH11
RRM_3
TC1
Motif
Other DBs
NCBI-GeneID:
114505221
NCBI-ProteinID:
XP_028378925
UniProt:
A0A6J2ML71
LinkDB
All DBs
Position
X:106294982..106297805
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AA seq
382 aa
AA seq
DB search
MGSGEPNPAGKKKKYLKAALYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPETRSPLG
YGYVNFRFPADAEWALNTMNFDLINGKPFRLMWSQPDDRLRKSGVGNIFIKNLDRSIDNR
ALFYLFSAFGNILSCKVVCDDNGSKGYAYVHFESVAAANRAIWHMNGVRLNNRQVYVGRF
KFPEERAAEVRTRDRAIFTNVFVKNLAEEMDDEKLKGIFSEYGPTESVKVIRDASGKSKG
FGFVRYETHEAAQKAVLDLHGKSLDGKVLYVGRAQKKIERLAELRRRFQRLKVKDKNRPP
GVPIYVRNLDETVDDEKLKEEFAPFGPISRAKVMVEVGQGKGFGVVCFSLFEDAIKAVDE
MNGRVVGSRPVHVSLGQSRGRW
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgggcagtggggagcccaatcctgctggcaagaaaaagaagtacctcaaggccgccctg
tacgtgggggacctggaccccgatgtcaccgaggacatgctgtataaaaagttcaggcct
gccggccccctgcgcttcaccagaatctgccgggaccccgagacccgcagccccctgggc
tatggctatgtcaactttcgctttcccgccgacgccgagtgggccctgaacaccatgaac
ttcgatctgatcaatggcaagccattccgcctcatgtggtctcagccagacgaccgccta
aggaagtctggagttggaaacatattcatcaaaaacctggacaggtccatagacaaccgg
gcccttttctatctgttctcggccttcgggaacattctgtcgtgcaaggtggtgtgcgac
gacaacggctccaagggctacgcctacgtgcacttcgagagcgtggcggccgccaacagg
gccatctggcacatgaacggcgtgcggctcaacaaccgccaggtgtacgtgggccgcttc
aagttccccgaggagcgggcggcggaggtgaggaccagggacagggcgatcttcaccaac
gtgttcgtgaagaacttggcggaggagatggacgacgagaaactcaagggcattttcagc
gaatatgggccgacggagagcgtcaaggtcatcagggacgccagcgggaagtccaaaggc
ttcgggttcgtgcgctacgagacgcacgaggcggcgcagaaggccgtgctggacctgcac
ggcaagtcgctggacggcaaggtcctgtacgtggggcgggcgcagaagaaaatcgagcgg
ctggcggagctccggcgacgctttcagcggctcaaggtcaaagacaagaaccggccccct
ggggtgcccatctacgtgagaaacctggacgagaccgtggacgatgagaaactgaaggag
gagtttgctcccttcgggcccatcagccgggccaaagtgatggtggaggtcgggcagggc
aaagggttcggggtcgtctgcttctcgttgtttgaagacgccatcaaagcggtggatgag
atgaacgggcgtgtagtgggctccaggccggtgcacgtgagcctgggccagtccaggggc
aggtggtga
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