Phyllostomus discolor (pale spear-nosed bat): 114506228
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Entry
114506228 CDS
T07739
Symbol
XRN2
Name
(RefSeq) 5'-3' exoribonuclease 2 isoform X1
KO
K12619
5'-3' exoribonuclease 2 [EC:3.1.13.-]
Organism
pdic
Phyllostomus discolor (pale spear-nosed bat)
Pathway
pdic03008
Ribosome biogenesis in eukaryotes
pdic03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pdic00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
114506228 (XRN2)
09123 Folding, sorting and degradation
03018 RNA degradation
114506228 (XRN2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pdic03021
]
114506228 (XRN2)
03019 Messenger RNA biogenesis [BR:
pdic03019
]
114506228 (XRN2)
03009 Ribosome biogenesis [BR:
pdic03009
]
114506228 (XRN2)
03016 Transfer RNA biogenesis [BR:
pdic03016
]
114506228 (XRN2)
Transcription machinery [BR:
pdic03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
114506228 (XRN2)
Messenger RNA biogenesis [BR:
pdic03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
5' exonucleases
114506228 (XRN2)
Ribosome biogenesis [BR:
pdic03009
]
Eukaryotic type
Pre-60S particles
RNases
114506228 (XRN2)
Transfer RNA biogenesis [BR:
pdic03016
]
Eukaryotic type
tRNA degradation factors
Rapid tRNA decay (RTD) pathway factors
114506228 (XRN2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XRN_M
XRN_N
Motif
Other DBs
NCBI-GeneID:
114506228
NCBI-ProteinID:
XP_028379564
UniProt:
A0A6J2MJ94
LinkDB
All DBs
Position
9:complement(63477215..63589760)
Genome browser
AA seq
950 aa
AA seq
DB search
MGVPAFFRWLSRKYPSIIVNCVEEKPKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIH
PCTHPEDKPAPKNEDEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR
ASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIAD
RLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLG
LATHEPNFTIIREEFKPNKPKPCGLCNQFGHEVKDCEGLPREKMGKHDELADSLPCTEGE
FIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREGAI
DRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRRRQKE
KRKRMKRDQPAFTPGGILTPHALSSRNSPVSQVASNVRQAAYEMRMQNNSSPSVSPNTSF
TSDGSPSPLGGIKRKADDSDSEPEPEDNVRLWEAGWKQRYYKNKFDVDAADEKFRRKVVQ
SYVEGLCWVLRYYYQGCASWKWYYPFHYAPFASDFEGIADMSSDFEKGTKPFKPLEQLMG
VFPAASGNFLPPSWRKLMSDPDSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRA
ALEEVYPDLTSEETKRNSLGSDVLFVGKYHPLYDFIVELYQTGSTEPVDLPPELCHGIQG
KFSLDEEAILPDQIVCSPVPMLRDLTQNTAVGINFKDPQFAEDYIFKAAILPGARKPAPV
LKPSDWEKSSNGRQWKPQLGFNRDRRPVHLDQAAFRTLGHVMPRGSGTGVYSNTAPPPMT
YQGNIYRPLLRGQAQIPKLMSNMRPQDSWRGPPPLFQQQRFDRSVGAEPLLPWNRMLQNQ
NAAFQPNQYQMLAGPGGYPPRRDDRGGRQGYPREGRKYPLPPPSGRYSWN
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atgggagtcccagcattctttcgctggctcagccgcaagtacccgtctatcattgttaac
tgcgtggaagagaagccaaaagaatgcaatggtgtaaagattcctgttgatgccagtaaa
cctaatccaaatgatgtggagtttgataatctatatttggatatgaatggaatcatccat
ccctgtactcatcctgaagacaaaccagcaccaaaaaatgaagatgaaatgatggttgca
atttttgagtacattgacagacttttcaatattgtaagaccaagacgacttctctacatg
gcaatagatggagtggcgccacgtgctaaaatgaatcaacagcgttctaggaggttcaga
gcatcaaaagaaggaatggaagcagcagtagagaagcagcgagtcagggaagaaatactg
gcaaaaggtggctttcttcctcctgaagagataaaagaaagatttgatagcaactgtatt
acaccaggaactgagttcatggacaatcttgctaaatgtcttcgctattacatagctgat
cgcttaaataatgaccctgggtggaaaaatttgacagttattttatctgatgccagtgct
cctggtgaaggagaacataaaatcatggattacattagaagacaaagagcccagcctaac
catgacccaaacacacatcattgcttatgtggagcagatgctgatctcatcatgcttggc
cttgctacacacgaacccaactttaccattattagagaagaattcaaaccaaacaaaccc
aaaccatgtggtctttgtaatcagtttggacatgaggtcaaggactgtgaaggtttgcca
agagaaaagatgggaaagcacgatgaacttgcagatagtcttccctgcacagagggagag
tttatcttccttcgtcttaatgttcttcgtgagtatttggaaagagagctcaccatggcc
agcctaccattcacatttgatgttgaacggagcattgatgactgggtcttcatgtgcttc
tttgtaggaaatgactttcttcctcacctaccgtcattagagattagggaaggtgcgatt
gaccgtttggttaacatatacaaaaatgtggtacacaaaactgggggttaccttacagaa
agtggttatgtcaatctgcaaagagtacagatgatcatgttagcagttggtgaagttgag
gatagcatttttaaaaagagaaaggatgatgaggacagttttagaagacgacagaaagaa
aaaagaaagagaatgaagagagatcaaccagcttttactcctggtggaatattaaccccc
catgccttgagttcaagaaattcaccagtttcgcaagtagccagtaatgtgagacaagca
gcctatgaaatgaggatgcagaataactctagtccttcagtatctcctaatacaagtttc
acttctgatggttccccgtctccgttaggaggaattaaacgaaaagcagatgacagcgac
agtgaacctgagccggaggataacgtcaggctatgggaagctggttggaagcagcggtac
tacaagaacaaatttgatgttgatgcagctgatgaaaaatttcgtcgtaaagttgtacag
tcttatgttgaagggctctgctgggttcttcgatattattaccagggctgtgcttcctgg
aagtggtattatccattccattatgcaccatttgcttcagactttgaaggtattgcagac
atgtcttctgattttgagaagggcactaaaccatttaaaccattggaacaacttatggga
gtttttccagctgcaagtggtaactttctacctccatcatggcggaagctcatgagtgat
ccagattctagtataattgacttctaccctgaagattttgctattgatttgaatgggaag
aaatatgcatggcaaggtgttgctctgttgccatttgtggatgagcgaaggctacgagct
gccctagaagaagtatacccagacctaacttcagaagagactaaaagaaacagtcttgga
agtgatgttttatttgttgggaaatatcacccactctatgacttcattgtagaactatac
cagacaggctccacagagccagtggatttaccacctgaactatgtcatggtattcaagga
aagttttctttggatgaagaagccattcttccagatcaaatagtgtgttctcctgttccc
atgttacgggatctgacacagaacactgcagtcggtattaactttaaagacccacagttt
gctgaagattacatttttaaagctgcaattcttccaggagcaagaaaaccagcaccagta
ctgaaacctagtgactgggaaaaatccagcaatggacggcagtggaaaccccagctgggc
tttaatcgggaccggcggcctgtccacctggatcaggcagcattcaggactttgggccat
gttatgccaagaggctcaggaactggtgtttatagcaatactgcgccaccacccatgact
taccagggtaacatatataggccgctgttgagaggacaagcccagattccaaaacttatg
tcaaatatgaggccccaggattcctggcgagggcctcctccccttttccagcaacaaaga
ttcgacagaagtgttggtgctgaacccctgctgccatggaaccggatgcttcaaaaccaa
aatgcagccttccagccaaatcagtaccagatgctagctgggcctggcggctatccaccc
agacgtgatgatcgtggaggaagacagggatatcccagagaaggaaggaaataccctctg
ccaccaccctcaggaagatacagttggaattag
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