Phyllostomus discolor (pale spear-nosed bat): 114508652
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Entry
114508652 CDS
T07739
Symbol
COL4A1
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-1(IV) chain
KO
K06237
collagen type IV alpha
Organism
pdic
Phyllostomus discolor (pale spear-nosed bat)
Pathway
pdic04151
PI3K-Akt signaling pathway
pdic04382
Cornified envelope formation
pdic04510
Focal adhesion
pdic04512
ECM-receptor interaction
pdic04820
Cytoskeleton in muscle cells
pdic04926
Relaxin signaling pathway
pdic04933
AGE-RAGE signaling pathway in diabetic complications
pdic04974
Protein digestion and absorption
pdic05146
Amoebiasis
pdic05165
Human papillomavirus infection
pdic05200
Pathways in cancer
pdic05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
pdic00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
114508652 (COL4A1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
114508652 (COL4A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
114508652 (COL4A1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
114508652 (COL4A1)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
114508652 (COL4A1)
09154 Digestive system
04974 Protein digestion and absorption
114508652 (COL4A1)
09158 Development and regeneration
04382 Cornified envelope formation
114508652 (COL4A1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
114508652 (COL4A1)
09162 Cancer: specific types
05222 Small cell lung cancer
114508652 (COL4A1)
09172 Infectious disease: viral
05165 Human papillomavirus infection
114508652 (COL4A1)
09174 Infectious disease: parasitic
05146 Amoebiasis
114508652 (COL4A1)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
114508652 (COL4A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pdic04147
]
114508652 (COL4A1)
00536 Glycosaminoglycan binding proteins [BR:
pdic00536
]
114508652 (COL4A1)
Exosome [BR:
pdic04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
114508652 (COL4A1)
Glycosaminoglycan binding proteins [BR:
pdic00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
114508652 (COL4A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
114508652
NCBI-ProteinID:
XP_028382458
UniProt:
A0A6J2MWW8
LinkDB
All DBs
Position
11:complement(64533993..64697992)
Genome browser
AA seq
1675 aa
AA seq
DB search
MGPGLGVWLLLLPAALLLHEERSRAAAKGGGCAGSGCGKCDCHGVKGQKGERGLPGLQGV
IGFPGMQGPEGPQGPPGQKGDTGEPGLPGTKGTRGPPGVSGYPGNPGLPGIPGQDGPPGP
PGIPGCNGTKGERGPLGPPGLPGFTGNPGPPGLPGIKGDPGEIIGYVPGVPLKGERGFPG
HPGAPGPPGLPGLQGPIGPPGFTGPPGPPGPPGPPGEKGQMGLSFQGPKGDKGDQGVSGP
PGVPGQAQVKEKGDYATKGEKGDKGDPGDQGEPGIGQKGEPGKPGPRGKPGKDGERGETG
GIGFPGDRGYPGLPGREGLKGDKGEAGPPGPPGTVVGPGPFGEKGERGYPGAPGLRGDPG
PKGYPGLQGQPGPPGISIPGQPGVPGYPGERGEKGDQGLPGVSLPGPSGRDGRPGLPGPP
GPPGQPGHTNGIVECQPGPVGDRGPPGIPGHPGLAGEVGEKGQKGDSCLICDTEGLRGPP
GPQGPPGEIGFPGQPGAKGEKGLPGRDGLEGLPGPQGTPGLMGQPGAKGEPGEIYFDAQL
KGDKGDPGFPGQPGMPGRAGTPGRDGHPGLPGPKGSPGLIGLKGDRGPPGGVGFPGSRGD
IGPPGPPGYGPIGPVGDKGQAGLPGNPGSPGQPGLRVXSRKSVPLPGPPGADGLPGSPGF
QGPQGDRGFPGTPGRPGLPGERGAVGQPGIGFPGPPGPKGCDGIPGDVGLPGNPGRPGSN
GXPGNPGLPGQKGEPGIGLPGPKGLPGLPGIPGTPGEKGSIGGPGVPGEHGAIGPPGLQG
SRGDPGPPGLQGPKGAPGVPGIGPPGMMGPPGRQGPPGSSGPPGVKGEKGFPGFPGLDMP
GPKGDKGSQGLPGLKGQLGPPGFPGQQGAPGLPGFPGLKGEMGVMGTPGQPGSPGPAGLP
GLPGEKGRAWFPGSSGPRGDPGFKGDKGDTGLPGQPGSMDMEKLKALKGQKGDKGVQGQV
GPSGDVXELEEDPGTPGVPGKDGQAGQPGQPGPKGDPGISGTPGAPGLPGPKGSVGGMGM
PGLPGEKGVPGIPGSQGLPGSPGEKGTKGEKGQXGLPGIGIPGLQGQRXQYPGDQGRAGF
PGSPGEKGEKGSSGLPGMPGSPGPKGSPGNVGYPGSPGLPGEKGDRGPPGLDGIPGAKGE
QGLPGQAGPTGPAGQKGEPGSDGIPGSAGEKGEPGVPARGFPGFPGSKGEKGSKGEVGFP
GLAGSPGIPGAKGDQGFMGPPGPQGQPGLPGIPGLPVEGPKGDRGPQGQPGLPGPQGQMG
PPGLPGLDGLKGDKGSPGWPGTPGVPGPKGDPGFQGMPGIGGSPGITGAKGDMGPPGVPG
FQGLKGLPGIQGVKGDPGDQGFPGAKGLPGPPGPPGPYDVIRGEPGLPGPEGPAGIKGLP
GPPGPKGQQGVTGSVGLPGPPGIPGFDGAPGQKGEPGPFGPPGPRGFPGPPGPDGLPGSM
GPPGTPSVDHGFLVTRHSQTTEDPQCPPGTKILYHGYSLLYVQGNERAHGQDLGTAGSCL
RKFSTMPFLFCNINNVCNFASRNDYSYWLSTPAPMPMSMAPISGENIRPFISRCAVCEAP
AMVMAVHSQTIQIPPCPNGWSSLWIGYSFVMHTSAGAEGSGQALASPGSCLEEFRSAPFI
ECHGRGTCNYYANAYSFWLAIIERSEMFKKPTPSTLKAGELNTHVSRCQVCMRRT
NT seq
5028 nt
NT seq
+upstream
nt +downstream
nt
atggggcccgggctcggcgtctggctgctgctgctgcccgcagcccttctgctccacgag
gagcgcagccgggccgctgcgaagggtggtggttgtgctggctctggctgtgggaaatgt
gactgccacggagtgaagggacaaaagggtgaaagaggcctcccagggttacaaggtgtc
atcggatttccaggaatgcaaggccctgaggggccgcagggaccacctggacaaaagggt
gacactggagaaccaggattgccaggaacaaaagggacaaggggaccgccaggagtatcg
ggctaccctggaaaccctggacttccgggtattcctggacaagatggcccacccggtccc
ccaggtatcccaggatgcaacgggacaaagggtgaaagagggccgctgggacctcctggt
ctgcctggattcactggaaatcctggaccacctgggttaccaggaattaagggggatcct
ggtgaaataatcggctatgtgcctggggtgccgttgaaaggtgaaagaggatttcctgga
cacccaggagcaccaggcccaccaggattgcccggactacagggtcccattggccctcca
gggtttactggaccaccaggtcccccaggccctcctggacctccaggtgaaaaggggcaa
atgggcttaagttttcaaggaccaaaaggtgacaagggtgatcaaggggtcagtggacct
ccaggagtgccaggtcaagctcaagttaaagaaaaaggagactatgccactaaaggagag
aagggtgataaaggtgaccctggagatcagggagagccagggattggacagaaaggtgaa
cctggaaaaccaggacctagaggaaaacctggaaaagatggtgaaagaggagaaacaggg
ggtatagggttccctggcgacagggggtatccgggactcccgggccgagagggtttaaag
ggagacaaaggcgaagcaggccctccaggcccacctggcactgttgtcggcccaggaccc
tttggagaaaaaggcgaacgggggtacccaggggctccagggttgagaggagatccaggc
cccaaaggttacccaggattacaaggccagccaggccccccaggcatctcaatacccggg
cagcctggtgtccctggctaccctggtgaaagaggagaaaaaggtgaccaaggacttcca
ggggtgtctctgccaggaccaagtggaagagatggacgcccaggccttcctgggcccccc
ggacctcctggacagccaggccacacgaatggaattgtggaatgccagcccggacccgta
ggtgatcggggtcctcccggaattccagggcatccaggattggcaggcgaagttggagag
aaaggtcaaaaaggagacagttgcctcatctgtgacacagaaggacttcgtggaccccct
gggccccagggacccccaggagaaataggtttcccaggacagccgggggccaagggtgaa
aaaggtttacctggcagggacggtctagaaggattgcctggccctcaagggacaccaggg
ctcatgggccagcccggagccaagggagagcctggtgagatttacttcgacgctcagctt
aaaggtgacaaaggagacccaggttttccgggacaacctggtatgccaggcagagcaggg
actcctggcagagatggccatccgggtctgcccggccccaaaggctccccgggtttaata
ggattaaaaggagaccgaggccccccaggaggggttggatttcccggcagtcgtggtgac
atcggccctcctgggcctccaggatatggaccaataggccctgttggtgacaaaggacaa
gcaggccttccgggaaatcctggatccccaggccagccaggtctcagggtgtgaagcagg
aagagtgtgcctttacctggtcctcctggagcagatggacttccgggttccccaggtttc
caaggacctcaaggtgatcgaggtttccctggaaccccgggaaggcctggcctcccagga
gagaggggtgctgttggccagccggggattggattcccaggacctccaggccccaaaggt
tgtgatggcatacctggagatgtgggacttcctgggaatccaggtcgcccaggatctaat
ggcntacctggcaacccaggtttgcctggccaaaagggagagcctggaattggtctgcca
ggacccaaaggattgccaggtcttccaggcattcccggcacacctggggagaagggaagc
atcgggggaccaggcgttcctggagagcatggagcaatcgggccccctggccttcaggga
agcagaggtgacccaggacctcctggattgcaaggtcccaaaggggctccgggggttcct
ggaataggtccccctggaatgatgggcccccctggaagacagggaccgccagggtcatca
ggccctcctggagtgaaaggagagaaaggcttccctggattcccaggcctggacatgccg
ggccccaaaggagataaagggagtcaagggctccctggcctaaagggacagttaggacct
ccaggttttcctggacagcagggggcaccaggacttcctgggtttccaggtctcaaggga
gagatgggcgtcatggggacccctgggcagcctggctctccaggaccagcaggcctgcca
ggattgccgggtgaaaaaggtagggcttggttcccaggctcttcaggacccaggggagat
cctggcttcaagggggacaaaggagataccggtctccctggccagcctgggtccatggat
atggagaagttaaaggcattgaagggtcaaaaaggagataaaggagtacaaggacaagtt
ggaccaagtggtgatgtgtaggagctcgaggaggaccctggaactccaggagtgcctgga
aaagatggccaagcagggcaacccggccagccaggacctaaaggtgatccaggcataagc
ggaaccccaggtgctccaggacttcctggaccaaaagggtcggttggtggaatgggcatg
ccaggactacctggagaaaagggtgtgcctggaatccctggctctcaggggctccctggc
tcacctggagagaaaggaacaaaaggagaaaaaggacagncaggcctacctggcattgga
attcctggactgcaggggcaaaggtaacagtaccctggagatcaggggagagcaggtttt
ccaggaagccctggagagaagggagaaaaaggaagcagtgggctcccaggcatgcctggg
tctccgggccccaaaggatcaccaggaaatgttggctatccaggaagccctgggttgcct
ggagaaaaaggtgacagaggtcccccgggactggatggcattcctggcgccaaaggagaa
caaggtcttcctgggcaggctggcccgacgggccccgctggccagaaaggggaacccggc
agtgatggaattccagggtctgcgggagagaagggtgaaccaggtgtacccgcgagagga
ttcccagggtttccagggtccaaaggagagaaaggttcaaagggtgaggtgggtttccca
ggattagctgggagcccaggaattcctggagccaaaggagaccaaggattcatgggtcct
ccggggccacaaggacagccaggattgcctggtattccaggcctccctgtggaggggccc
aaaggagaccgtggtccacagggacaacctggcctgccaggacctcaggggcaaatgggg
cctccggggctccctgggcttgatggattgaaaggtgacaaaggaagcccaggctggcca
gggactcctggtgttccaggacccaagggagaccctggattccaaggcatgcctgggatt
ggtggctctccaggaatcacaggtgctaagggtgatatgggacctccaggagttccaggt
tttcaaggtctgaaaggtctccctggcattcagggagttaaaggagacccaggagaccaa
ggtttccctggagctaaaggtcttccaggtccccctggaccaccaggtccttatgatgtc
atcagaggggagccagggttgcctggtcctgagggtcctgctggtataaaagggcttccc
ggacctccaggtcccaaaggacagcaaggtgtgacaggatcagtgggcttacctgggcca
ccaggtattcccgggtttgacggtgcccctggccagaaaggagagccaggaccctttgga
cctcctggtccacgagggttcccaggaccaccaggccctgatggtttgccaggatccatg
ggtcccccaggcaccccatctgttgatcatggtttccttgtgaccaggcacagtcaaaca
acagaagatccacagtgtcctcctgggaccaaaattctttaccacgggtactctttgctc
tatgtgcaaggcaatgaacgggcccacggacaggacttaggcacggctggaagttgcctg
cgcaagttcagtacgatgcccttcctgttctgcaatatcaacaatgtctgcaacttcgcc
tcccgaaatgactattcctactggttgtccactccagcacccatgccaatgtctatggca
cccatctccggggaaaatattagaccgtttattagcaggtgtgcagtgtgtgaggctcca
gccatggtgatggcggtgcacagccagacgattcagatcccaccatgccccaatggatgg
tcctcgctctggattggctattcctttgtgatgcacaccagcgctggggcggaaggttct
ggccaagcccttgcatcccccggctcctgtctggaagagtttagaagtgctccattcatc
gagtgccacggccgtgggacttgtaattactacgcaaatgcttacagcttttggcttgcc
attatagagagaagtgagatgttcaagaagcccacgccgtccaccttgaaggctggggag
ctgaacacgcatgtcagtcgctgtcaagtctgtatgagaagaacataa
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