Phyllostomus discolor (pale spear-nosed bat): 114509943
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Entry
114509943 CDS
T07739
Symbol
XAB2
Name
(RefSeq) pre-mRNA-splicing factor SYF1
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
pdic
Phyllostomus discolor (pale spear-nosed bat)
Pathway
pdic03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pdic00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114509943 (XAB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdic03019
]
114509943 (XAB2)
03041 Spliceosome [BR:
pdic03041
]
114509943 (XAB2)
Messenger RNA biogenesis [BR:
pdic03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
114509943 (XAB2)
Spliceosome [BR:
pdic03041
]
Complex B
Other components
Prp19-related factors
114509943 (XAB2)
Complex C
114509943 (XAB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
HAT_PRP39_N
TPR_14
TPR_12
TPR_2
TPR_8
Suf
TPR_19
ARM_TT21
ARM_TT21_C
TPR_15
TPR_1
TPR_NPHP3
Motif
Other DBs
NCBI-GeneID:
114509943
NCBI-ProteinID:
XP_028384353
UniProt:
A0A6J2N279
LinkDB
All DBs
Position
13:complement(449314..459454)
Genome browser
AA seq
855 aa
AA seq
DB search
MVVMARLSRQERPDLVFDEEDLPYEEEIMRNQFSVKCWLRYIEFKQGAPKPRLNQLYERA
LKLLPCSYKLWYRYLKARRAQVKHRCVTDPAYEDVNNCHERAFVFMHKMPRLWLDYCQFL
MDQGRVTHTRRTFDRALRALPITQHSRIWPLYLRFLRSHPLPETAVRGYRRFLKLSPESA
EEYIEYLKSSDRLDEAAQRLATVVNDERFVSKAGKSNYQLWHELCDLISQNPDKVQSLNV
DAIIRGGLTRFTDQLGKLWCSLADYYIRSGHFEKARDVYEEAIRTVMTVRDFTQVFDSYA
QFEESMIAAQMETASELGREEDDDVDLELRLARFEQLIGRRPLLLNSVLLRQNPHHVHEW
HKRVALHQGRPREIINTYTEAVQTVDPFKATGKPHTLWVAFAKFYEENGQLDDARVILEK
ATRVSFKQVDDLASVWCECGELELRHENYDQALRLLRKATALPARRAEYFDGSEPVQNRV
YKSLKVWSMLADLEESLGTFQSTKAVYDRILDLRIATPQIVINYAMFLEEHKYFEESFKA
YERGISLFKWPNVSDIWSTYLTKFIARYGGRKLERARDLFEQALDGCPPRYAKTLYLLYA
QLEEEWGLARHAMAVYERATQAVEPAQQYDMFNIYIKRAAEIYGVTHTRGIYQKAIEVLS
DEHAREMCLRFADMECKLGEIDRARAIYSFCSQICDPRTTGAFWQTWKDFEVRHGNEDTI
REMLRIRRSVQATYNTQVNFMASQMLKVSGSAAGTVSDLAPGQSGMDDMKLLEQRAEQLA
AEAEHDQPTRAQNKILFVRSDASREELAELAQQANPEEIELGEDEDDDEMDLEPNEVRLE
QQSVPAAVFGSLKED
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atggtggtcatggcgcgactttcgcggcaggagcggccggatctggtctttgatgaagaa
gacctcccctatgaggaggaaattatgcggaaccagttctccgtcaagtgctggctccgc
tacatcgagttcaaacagggcgccccgaagcccaggctcaatcagctgtacgagcgagcc
ctgaagctgctgccctgcagctacaagctctggtaccgctatctgaaggcgcgccgggca
caggtgaagcatcgctgtgtcaccgaccctgcctacgaagacgtcaacaactgccacgag
agggcctttgtgttcatgcacaagatgccacgcctgtggctggactactgccagttcttg
atggaccagggccgcgtcactcatacccgccgcacctttgaccgtgccctccgggcactg
cccatcactcagcactctcgtatttggcccctgtacctgcgcttcctgcgctcgcacccg
ctgcctgagacggctgtgcggggctaccggcgcttcctcaagctgagccctgagagcgca
gaggagtacatcgagtacctcaagtccagtgaccggctggatgaggccgcacagcgcctg
gccactgtggtgaatgatgagcgcttcgtgtccaaggctggcaagtccaactatcagctg
tggcacgagctctgtgacctcatctcccagaacccggacaaggtgcagtcgctcaacgtg
gacgccatcatccgagggggcctcacccgcttcactgaccagctgggcaagctctggtgc
tcgctggccgactactacattcgcagtggccactttgaaaaggctcgggatgtgtatgag
gaggccatccggaccgtgatgaccgtgcgggacttcacccaggtgttcgacagctacgcc
cagtttgaggagagcatgattgcagctcagatggagactgcctctgagctggggcgggag
gaggatgacgatgtggacctggagctgcggctggcccgctttgagcagctcatcggccgg
cggcccctgctgctcaacagtgtcctgctgcgccagaacccgcaccacgtgcatgagtgg
cacaagcgtgtggccctgcaccagggccgcccccgggagatcatcaacacatacacggag
gccgtgcagacggtggaccccttcaaggccacgggcaaaccccacacgctgtgggtagcg
tttgcgaagttctatgaggaaaacgggcagctggatgatgcccgagtcatcctggagaag
gccaccagagtgagcttcaagcaggtagacgacctggccagcgtgtggtgcgagtgtggt
gagctggagctccggcacgagaattacgaccaggccttgcggctgctacggaaggcaaca
gcgctgcctgcccgccgggctgaatacttcgatggctcggagcctgtgcagaaccgtgtg
tacaagtccctgaaggtgtggtccatgcttgccgacctagaggagagccttggcaccttc
cagtccaccaaggctgtgtatgaccgcattctggacctacgcattgccacaccccagatt
gtcatcaattacgccatgttcctggaggagcacaagtacttcgaggagagcttcaaggcg
tatgagcgtggcatctcactgttcaagtggcccaacgtgtccgatatctggagcacctac
ctgaccaagttcattgcccgctatgggggccgcaagctggagcgggctcgggacctcttt
gagcaggcactggacggctgccccccgagatacgcgaagaccctgtacctgctgtatgca
cagctggaggaggagtggggcctggctcggcatgccatggctgtgtatgagcgtgccacc
caagctgtggagcctgcccagcagtacgacatgttcaacatctacatcaagcgggccgcg
gagatctacggagtcacccacacccgtggcatctaccagaaggccattgaggtgctgtcg
gatgagcacgcccgggagatgtgcctgcggtttgcggacatggagtgcaagctgggagag
attgaccgcgcccgggccatctacagcttctgctcccagatctgtgacccccggacaacc
ggggccttctggcaaacatggaaggacttcgaggtgcggcacggcaatgaggacaccatc
cgggagatgctgcgcattcgccgcagcgtgcaggctacgtacaacacgcaggtcaacttc
atggcctcccagatgctcaaggtgtcaggcagcgccgcgggcactgtgtctgacctggcc
cctgggcagagcggcatggatgacatgaagctgcttgagcagcgggccgagcagctggcg
gctgaggctgagcacgaccagcccacacgggcccagaacaagatcctgttcgtgaggagc
gacgcatcccgggaggaactggccgagttggcccagcaagccaacccggaggagatcgag
ctgggcgaggacgaggatgacgacgagatggacctggagcccaacgaggtgcggctggag
cagcagagcgtaccggctgctgtatttgggagtctgaaggaagactga
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