Phyllostomus discolor (pale spear-nosed bat): 114511297
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Entry
114511297 CDS
T07739
Symbol
SYMPK
Name
(RefSeq) symplekin isoform X1
KO
K06100
symplekin
Organism
pdic
Phyllostomus discolor (pale spear-nosed bat)
Pathway
pdic03015
mRNA surveillance pathway
pdic04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
pdic00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
114511297 (SYMPK)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
114511297 (SYMPK)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pdic03021
]
114511297 (SYMPK)
03019 Messenger RNA biogenesis [BR:
pdic03019
]
114511297 (SYMPK)
Transcription machinery [BR:
pdic03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
114511297 (SYMPK)
Messenger RNA biogenesis [BR:
pdic03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
114511297 (SYMPK)
U7-dependent histone pre-mRNA processing factors
114511297 (SYMPK)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Symplekin_C
SYMPK_PTA1_N
PDS5
Cnd1
Cohesin_HEAT
Motif
Other DBs
NCBI-GeneID:
114511297
NCBI-ProteinID:
XP_028385780
UniProt:
A0A6J2N767
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All DBs
Position
12:complement(17082337..17118652)
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AA seq
1280 aa
AA seq
DB search
MAGSSGDSVTRRSVASQFFTQEEGLGIDVMTTSERVVDLLNQAALITSDSKITVLKQVQE
LIINKDPTLLDNFLDEIIAFQVDKSIEVRKFVIGFIEEACKRDIELLLKLIANLNMLLRD
ENVNVVKRAILTMTQLYKVALQWMVKSRVISELQEACWDMVSAMAGDIILMLDSDNDGVR
THAIKFVEAFIVTLSPRMADSEVPRRHEQDISLDRVPRDHPYIQYNVLWEEGKAALEQLL
KFMVHPAISSINLTTALGSLANIARQRPMFMSEVIQAYETLHANLPPTLAKSQVSSVRKN
LKLHLLSVLKHPASLEFQAQITTLLVDLGTPQAEIARNMPNSKDARKRPRDDSDSSLKKM
KLEPNLGEDDEDKDLEPGPSGTSKASAQISGQSDTDITAEFLQPLLTPDNVANLVLISMV
YLPETMPASFQAIYTPVESAGTEAQIKHLARLMATQMTAAGLGPGVEQTKQSKEEPKEEK
VAKPESVLIKRRLSAQGQAISVVGSLSAMSTLEEEAPQAKRRPEPIIPVTQPRLAGAGGR
KKIFRLSDVLKPLTDAQVEAMKLGAVKRILRAEKAVACSGAAQQARVKILASLVTQFDSG
LKAEVLAFILEDVRARLDLAFAWLYQEYNAYLAAGASGTLDKYEDCLIRLLSGLQEKPDQ
KDGIFTKVVLEAPLITESALEVIRKYCEDESRTYLGMSTLRDLIFKRPSRQFQYLHVLLD
LSSHEKDKVRSQALLFIKRMYEKEQLREYVEKFALNYLQLLVHPNPPSVLFGADKDTEVA
APWTDETVKQCLYLYLALLPQNHKLIHELAAVYTEAIADIKRTVLRVIEQPIRGMGMNSP
ELLLLVENCPKGAETLVTRCLHSLTDKVPPSPELVKRVRDLYHKRLPDVRFLIPVLNGLE
KKEVIQALPKLIKLNPIVVKEVFNRLLGTQHGEGNSALSPLNPGELLIALHNIDSSKCDM
KSIIKATNLCFAERNVYTSEVLAVVMQQLMEQSPLPMLLMRTVIQSLTMYPRLGGFVMNI
LSRLIMKQVWKYPKVWEGFIKCCQRTKPQSFQVILQLPPQQLGAVFDKCPELREPLLAHV
RSFTPHQQAHIPNSIMTILEASGKQEPEAKEPPAGPLEEDDLEPLALAPAPAPRPPQDLI
GLRLAQEKALKRQLEEEQKLKPGGVAAPPSSSSSSARPGPPQGAPQPEEAMDFREEGPEC
ETPAIFISMDDDSGLTEAALLDSSLEGPLPKEAAVGGLTSKEERSPQTLTPAGEDTAKTP
SPAATAAAEETGEPETKGNS
NT seq
3843 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcagcagtggggacagcgtcactcgccggagtgtggcgtcacagtttttcaca
caagaggaggggctgggcatcgacgtcatgaccacctcggagagagtggtggacctcctg
aaccaggccgcgctgatcaccagcgactcgaagatcacagtgctcaaacaggtccaggaa
ctgatcatcaacaaagatcccacgctgttggacaacttcctggatgagatcatcgccttc
caagtggataagtcgattgaagtgcgcaaatttgtcattggcttcatcgaggaggcatgc
aagcgagacattgagttattgctgaaactgattgcgaacctcaacatgctcctgagggac
gagaacgtgaacgtggtgaagagggccatcctcaccatgacccagctctacaaggtggcc
ctgcagtggatggtgaagtctcgcgtcatcagcgagctgcaggaggcctgctgggacatg
gtgtctgccatggccggggacatcattctgatgctggactcggacaacgacggtgtgcgc
acccacgccatcaagtttgtggaggccttcattgtcaccctgtccccccgcatggcggac
tcggaggtgccccggcgccacgagcaggacatcagcctggaccgcgtcccccgtgaccac
ccctacatccagtacaatgtgctgtgggaggagggcaaggcagccttggagcagctcctc
aagttcatggtacaccctgccatctcgtccatcaacctgaccacggcgctgggctccctt
gccaacatcgcccgccagaggcccatgttcatgtccgaggtgattcaggcctacgaaacc
ctgcacgctaacttgcccccaacgctggccaagtctcaggtgagcagcgttcgcaagaac
ctcaagttgcacctgttgagtgtgctgaagcacccggcctccctggagttccaggcccag
atcaccacgctgctggtggacctgggcacgccgcaggccgagatagcccgcaacatgccc
aacagcaaggacgcccgcaagcggccccgggacgactcggactcctcgctcaagaagatg
aagctggagcccaacctgggggaagatgatgaggacaaggacttggagccaggcccgtcg
gggacctcaaaggcctcagcccagatctcaggccagtcggacacggacatcacagccgag
ttcctgcagcctctgctgacgcccgacaatgtggccaatctggtcctcatcagcatggtg
tacctgccggagaccatgcctgcctccttccaagccatctacaccccggtggagtccgcg
ggcaccgaagcccagatcaagcacctggcccggctcatggccacacagatgacggccgcg
ggactggggcccggtgtggagcagaccaagcagtccaaggaggagcccaaggaggagaag
gtggcgaagcccgagagcgtcctgatcaagcgacggctgtcagcgcagggccaggccatc
tcggtggtgggctctctgagcgccatgtccacactggaggaggaggcgccccaggccaag
agacggcctgagcccatcatccctgtcacacagccccggctggcgggtgccggtgggcgc
aagaaaatcttccgtctgagcgatgtcctgaagcccctgacggacgcgcaggtggaggcc
atgaagctgggcgccgtgaagcggatcctgcgggcggagaaggctgtggcctgcagcggg
gcggcccagcaggcacgcgtcaagatcctggccagcctggtgacgcagttcgactcgggc
ctgaaggccgaggtcctggccttcatcctggaggatgtgcgggcccgcctggacctggcc
ttcgcctggctctatcaggagtacaacgcctacctagcggccggggcctcgggcaccctg
gacaagtacgaggactgcctcatccgcctgctctccggcctgcaggagaagcccgaccag
aaggatgggatcttcacgaaggtggtgttggaggcgccactcatcacggagagtgccctg
gaggtgatccgcaagtactgcgaggacgagagtcgcacctacctgggcatgtccactctc
cgagacctcatcttcaagcgcccgtcccgccagttccagtacctgcatgtcctgctggac
ctcagctcccacgagaaggacaaggtgcgctcccaggccctgctgttcatcaagcgcatg
tacgagaaggagcagctgcgcgagtacgtggagaagtttgccctgaactacctgcagctg
ctggtccaccccaacccgccgtccgtgctgtttggggccgacaaggacacagaggtggcc
gcgccctggaccgacgagacggtgaagcagtgtctgtacctctacctggccctcctgcct
cagaaccacaagctgatccacgagctggcagccgtgtacactgaggccatcgctgacatc
aagcggacagtgctgagggtcatcgaacagccgatccgaggaatgggcatgaactctcca
gagctgctgctcctggtggaaaactgtcccaagggggcagagacgctggtcacgagatgc
ctgcacagcctcacagataaagtcccgccctccccggagctggtgaagcgggtccgagac
ctgtaccacaagcggctgccggacgtccgcttcctcatccccgtgctcaacgggctggag
aagaaagaagtgatccaggctctgcccaagctcatcaaactcaaccccattgtggtgaaa
gaggttttcaaccgcctgctgggcacccagcacggtgaagggaactcggccctgtccccc
ctgaaccctggagagctgctgattgcattacacaacatagactcgtcgaagtgtgacatg
aagtccatcatcaaagccaccaacctgtgctttgcggagcggaacgtgtacacgtcggag
gtgctggccgtggtgatgcagcagctgatggagcagagccccctgcccatgctgctcatg
aggaccgtcatccagtccctgaccatgtacccccgcctggggggcttcgtcatgaacatc
ctgtcccgcctcatcatgaagcaggtgtggaagtaccccaaggtgtgggagggcttcatc
aagtgctgccaacgcaccaagccccagagcttccaggtcatcctgcagctgccaccccag
cagctaggcgctgtctttgacaagtgcccagagctccgggagcccctgctggcccatgtc
cgctccttcaccccccatcagcaagcacacatccccaactccatcatgaccatcctggag
gcgagcggcaagcaggagccggaggccaaggagcctcctgcagggcccctggaagaggat
gacctggagcccctggctctggccccggctcctgccccccggccccctcaggacctcatt
ggcctgcggctggcccaggagaaggccttgaagcggcagctggaggaggaacagaagttg
aagcctgggggcgtggcagcccctccctcctcgtcctcgtcctctgccaggccaggcccc
ccgcagggcgccccccagccggaggaagccatggatttccgggaggaggggcctgagtgt
gagacccccgccatcttcatcagcatggatgacgactcggggctgaccgaggccgctctg
ctggactcgagtcttgaggggcccctaccgaaggaggcagcagtgggcgggttgacgtcg
aaggaggagaggagcccccagaccctcacccctgctggagaagacaccgcgaagactccc
agccctgctgccaccgccgccgcggaggaaaccggggaacccgagaccaaggggaacagc
tga
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integrated database retrieval system
