Phyllostomus discolor (pale spear-nosed bat): 114511673
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Entry
114511673 CDS
T07739
Symbol
TRIM28
Name
(RefSeq) transcription intermediary factor 1-beta isoform X2
KO
K08882
tripartite motif-containing protein 28 [EC:
2.3.2.27
]
Organism
pdic
Phyllostomus discolor (pale spear-nosed bat)
Brite
KEGG Orthology (KO) [BR:
pdic00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pdic01001
]
114511673 (TRIM28)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pdic04121
]
114511673 (TRIM28)
Enzymes [BR:
pdic01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
114511673 (TRIM28)
Protein kinases [BR:
pdic01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
114511673 (TRIM28)
Ubiquitin system [BR:
pdic04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
114511673 (TRIM28)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-B_box
ANCHR-like_BBOX
PHD
zf-RING_5
zf-RING_UBOX
PHD_2
PHD-1st_NSD
zf-C3HC4
YaaC
Motif
Other DBs
NCBI-GeneID:
114511673
NCBI-ProteinID:
XP_028386252
UniProt:
A0A6J2N1D7
LinkDB
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Position
12:30623337..30629485
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AA seq
841 aa
AA seq
DB search
MAASAAAASAAAATASSSSPGPGEGSAGSEKRAPAAAAASVAASASGSASASASASSPAG
GGGEALELLEHCGVCRERLRPEREPRLLPCLHSACNACLGPPAPSSANSAGDAGAAGDGA
VVDCPVCKQQCFSKDIVENYFMRDSGSKAPTDSQDANQCCTSCEDNAPATSYCVECSEPL
CETCVEAHQRVKYTKDHTVRSTGPAKSRDGERTVYCNVHKHEPLVLFCESCDTLTCRDCQ
LNAHKDHQYQFLEDAVRNQRKLLASLVKRLGDKHATLQKNTKEVRSSIRQVSDVQKRVQV
DVKMAILQIMKELNKRGRVLVNDAQKVTEGQQERLERQHWTMTKIQKHQEHILRFASWAL
ESDNNTALLLSKKLIYFQLHRALKMIVDPVEPHGEMKFQWDLNAWTKSAEAFGKIVAERP
GTNSTGPAPMAPPRAPGPLSKQGSGSSQPMDVQEGYGFVSADDPYMSAEPHVSGMKRSRS
GEGEVSGLMRKVPRVSLERLDLDLTADSQPPVFKVFPGSTTEDYNLIVIERGAAAAAAGQ
PGTAPGAPGAQPLPGMAIVKEEETEAAIGAPPAATEGPETKPVLMTLAEGPGAEGPRLVS
PSGSTSSGLEVVAPEGTSAPTGGPGALDDSATICRVCQKPGDLVMCNQCEFCFHLDCHLP
ALQDVPGEEWSCSLCHVPPDLKEEDGSLSLDGGDSSGVVAKLSPANQQKCERVLLALFCH
EPCRPLHQLATDSSFSVDQPGGTLDLTLIRARLQEKLSPPYSSPQEFAQDVGRMFKQFNK
LTEDKADVQSIIGLQRFFETRMNEAFGDTKFSAVLVEPPPLSLPGPGLSAQELSSGPGDG
P
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atggcggcctcggcggcagcggcctcggcggcggcggcaacagcctcctctagcagcccg
ggacctggcgaggggtcggcgggcagcgaaaagcgtgcccccgccgcggccgcagcttcg
gttgcggcatctgcctcgggttcggcctccgcttcggcttcggcgtcgtcgcccgcgggg
ggcggtggcgaggcgctggagcttctggagcactgcggcgtgtgccgggagcgcctgcgg
ccggagcgggagccacgcttgctcccctgtttgcactcggcctgcaacgcctgcctcgga
ccgccggcgccctcctccgccaacagcgcgggggacgctggggcggcgggcgatggtgcc
gttgtggactgtcccgtgtgtaagcagcaatgtttctccaaagatattgtggagaattat
tttatgcgcgacagtggcagcaaggctcctactgactcccaggatgcgaatcagtgctgc
accagctgtgaggataacgcccctgccaccagctattgtgtggagtgctccgagccgctg
tgtgagacttgtgtagaggcacaccagcgggtgaaatataccaaggaccacactgtgcgc
tccactggaccagccaagtcccgagatggtgagcgcacggtgtactgcaatgtgcacaag
cacgagcccctcgtgttgttctgtgagagttgtgacaccctcacctgccgagactgccag
ctcaacgcccacaaggaccaccaataccagttcctggaggacgcagtgaggaaccagcgc
aagctcctggcctcgctcgtgaagcgccttggggacaagcatgcgacgctgcagaagaac
accaaggaggttcgcagctcgatccgccaagtgtctgatgtgcagaagcgtgtacaggtg
gatgttaagatggcgattctgcagatcatgaaggaactgaacaagcgcggtcgggtgctg
gtcaatgatgcccagaaggtaacggaggggcagcaggagcgcctggagcggcagcattgg
accatgaccaagatccaaaagcatcaggagcacatcctgcgtttcgcctcatgggccctg
gagagtgacaacaatactgctcttctgctgtccaagaagttgatctacttccagctgcac
cgcgccctcaagatgatcgtggaccctgtggagccacatggcgagatgaagttccagtgg
gacctcaatgcctggaccaagagcgctgaggcctttggcaagattgtggcagagcgccct
ggcaccaactcaacaggccctgcgcccatggcccctccacgggctccagggcccttaagc
aagcagggctctggcagtagccagcccatggacgtgcaggaaggctatggcttcgtgtca
gcagacgatccttacatgagtgcagagcctcacgtgtcaggcatgaaacggtcccgctca
ggtgagggtgaagtgagtggtctcatgcgcaaggtgccacgggtgagcctggagcgcctg
gatcttgacctcacagctgacagccagccgccagtcttcaaggtcttcccaggcagcacc
actgaggattataacctgatagttattgagcgtggggctgcagctgcagctgctggacag
cctggaactgcgcccggggcccctggggcccagcccctccctggcatggccattgtcaag
gaggaagagacagaggctgctattggagccccacctgcagccactgaaggccctgagacc
aagcctgtgctgatgaccctggcagagggcccgggtgctgagggcccccgcctggtctca
cccagtggcagcactagctctggcctggaggtggtggctccagagggcacttcagccccc
actggtggtccaggtgccttggatgacagtgctaccatatgccgtgtctgccagaagcca
ggcgacctggtcatgtgcaaccagtgcgagttttgctttcacttggactgccatctgcca
gccctgcaggatgtgccaggggaggagtggagctgctcactctgccacgtgccacctgat
ctgaaggaggaggatggcagtctgagcctggatggtggcgatagcagtggtgtggtggcc
aagctctcgccagccaaccagcagaagtgtgagcgtgtcctgctggccctgttctgccac
gagccctgccgtcctctgcaccagctggccactgactccagcttttctgtggatcaacct
ggtggtactttggacctgacgctgatccgcgcccgtctccaggagaagttgtcgcccccc
tacagctcacctcaagagtttgcacaggatgtgggccgaatgtttaagcagttcaacaag
ctgacagaggacaaggcggatgtgcagtccatcatcggcctgcagcgcttcttcgagact
cgcatgaatgaggcctttggtgacaccaagttctcagctgtgctggtggagcccccaccg
ctgagcctgcctggtccaggcctgagtgcccaggagttgtccagtggtcctggtgatggc
ccgtga
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