Phyllostomus discolor (pale spear-nosed bat): 114512055
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Entry
114512055 CDS
T07739
Symbol
RC3H1
Name
(RefSeq) roquin-1 isoform X1
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
pdic
Phyllostomus discolor (pale spear-nosed bat)
Brite
KEGG Orthology (KO) [BR:
pdic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pdic03000
]
114512055 (RC3H1)
04121 Ubiquitin system [BR:
pdic04121
]
114512055 (RC3H1)
Transcription factors [BR:
pdic03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
114512055 (RC3H1)
Ubiquitin system [BR:
pdic04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
114512055 (RC3H1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-RING_UBOX
zf-RING_2
zf-C3HC4_4
Prok-RING_4
zf-CCCH
zf-C3HC4_3
zf-C3HC4
zf-C3HC4_2
zf_CCCH_4
zf-CCCH_4
FYVE
Vesi_VP2
PaaA_PaaC
Baculo_IE-1
zf-RING_4
zf-RING_6
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
114512055
NCBI-ProteinID:
XP_028386758
UniProt:
A0A6J2N951
LinkDB
All DBs
Position
14:21708792..21773705
Genome browser
AA seq
1119 aa
AA seq
DB search
MPVQAPQWTDFLSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHRKACPFDQTTINTD
IELLPVNSALLQLVGAQVPEQPPITLCSGVEDTKHYEEAKKCVEELALYLKPLSSARGVG
LNSTTQSVLSRPMQRKLVTLVHCQLVEEEGRIRAMRAARSLGERTVTELILQHQNPQQLS
SNLWAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKT
SIGHVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDSQIVQIAMEAGLRIAP
DQWSSLLYGDQTHKSHMQSIIDKLQTPASFAQSVQELTIALQRTGDPANLNRLRPHLELL
ANIDPSPDAPPPTWEQLENGLVAVRTVVHGLVDYIQNHSKKGADQQQPPQHSKYKTYMCR
DMKQRGGCPRGASCTFAHSQEELEKFRKMNKRLVPRRPLSASLGQLNEVGLPAAAVLPDD
GTVDLPGRKPPALPNGIVSAGNTVTQLIPRGTDPSYDSSLKPGKMDHLSSSAPGSPPDLL
ESVPKSIPALAVNPHPVPPRGLTDLPPMPVTKPLQMVPRGSQPYPAQQADVYYPDPRGAA
PPFEPAPYQQGMYYPAPQCVSRFVRPPPSAPEPAPPYLDHYPPYLPDRVINPPYGTQPHQ
YPPMYPPHCDGRRVYPAQSYPREEIFRESSIEIPPPAVPSYVPESRERYQQVEGYYPVAP
HPAQIRPSYIRETPYSRLPPPPQPHPSLDELHRRRKEIMAQLEERKVISPPPFAPSPTLP
PPFHPEEFLDEDLKAGKYKGNDYSQYSPWSCDTIGSYIGTKDAKPKDAVAAGSAEMMNVE
SKGVRDQRLDHQRRATETSDDDLIPFGDRPTVSRFGAISRTSKTIYQGAGPLQAMAPQGA
PTKSMNMSDYSPYGAHGGWGGSPYSPHQSAAPQAHFGERERASTSEAASHGKPLPPADRE
QLRLELQQLNHQISRQTQLRGPEREASTLASQPQAPPAPPKWPGMISSEQLSLELHQVER
EIGKRTRELSLENQCSLDMKSKLNTSKQAENGQPEPQNKVPAEDLTLTFSDVPNGSALTQ
ENIGLLSNQTSSLNLSEDPEGGGDNSDSQRPGVAPSPAP
NT seq
3360 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtacaagctccacagtggacggatttcctttcctgcccgatttgcactcagact
ttcgacgaaacaattcgaaagcccatcagtttgggttgtggccatactgtctgcaagatg
tgcctgaataaactccaccgcaaggcttgccccttcgaccagaccactatcaatacagac
atcgagctcctcccggtgaactcggcattgctgcagctagtgggtgctcaggtccctgag
cagccgcccatcactctgtgtagtggggtggaagatacaaagcattatgaggaagccaag
aagtgtgtagaagaattagcattgtacctgaaaccactcagcagtgctagaggagtgggt
ctgaacagcacgactcagagtgtcctgagccgcccgatgcagaggaagctggtgacgctg
gtccactgccagctcgtggaagaagagggcaggattcgtgccatgcgggcagcccggtct
ttgggcgaacggacagtcacagagctcatcctccagcaccagaaccctcaacagctctct
tccaatctttgggcggcagtcagggcccgcggctgccagttccttggaccagcaatgcag
gaggaagctctgaagctggttctcctggccttagaagatggttctgctctatccagaaaa
gtactggttctctttgtggtgcaaaggttggagcctcggttcccgcaagcctccaaaact
agcattgggcatgttgtccagctcctttatcgagcctcctgcttcaaggtcaccaagcgc
gacgaagactcttctctgatgcagctgaaggaagaattcagaacctacgaagcgctgcgg
cgagagcacgactcccagatcgtgcagatagcgatggaggcgggcctgcgcatcgcgccg
gaccagtggtcctcgctgctgtacggagaccagacccacaagtctcacatgcagtccatc
attgacaagttgcagactccagcctcttttgcacaaagtgttcaggaactaacgattgct
ctccagcggactggagatccagcaaacttgaaccgcctgcggccccatttggagctactg
gcgaacatcgaccctagtccagatgctcctcctcctacttgggagcagctggaaaacggg
ctggtcgccgtgcgcacggtggtacacgggctggtggattacatccagaaccacagcaag
aaaggagccgaccagcagcagcctccgcagcatagcaaatacaaaacgtacatgtgtcga
gacatgaagcagagaggaggatgccctcgcggggccagctgtacatttgcacactcccag
gaggaactggaaaaattccgtaagatgaacaaacgcctagttcccagaagacccctgagc
gcctctttgggccagctgaacgaggtgggcctgcctgcagcggccgtcctcccagacgac
ggcaccgtggatctgcccggcagaaagccccccgctctgcccaacgggattgtgtcagca
gggaacacggtcacgcagctgatcccacgagggaccgaccccagctacgactccagtctg
aaaccagggaagatggatcatctgagcagcagcgcccccggatcccctcctgacctgctg
gaatcggtccctaagagcatccctgccctagctgtgaatccgcatcctgtacctccacgg
ggcctgacagacctgcctcccatgcccgtcaccaagccgctccagatggtgccgcggggc
tcccagccgtaccccgcgcagcaggccgatgtctactatccggaccctcggggagcagct
ccgcccttcgagcccgcgccctatcagcagggaatgtactaccctgcgccgcagtgcgtg
tcccgcttcgtgcggcctccgccgtctgctcctgagcccgcacctccctacctggatcat
tacccgccctacctcccggaccgcgtcataaaccctccgtacggcacacagccgcaccag
tacccgcccatgtacccgccgcactgcgatggccgtcgagtgtaccctgctcagtcttac
cccagagaggagatcttccgggaaagctccattgagattccgcctccggcagtaccgtcc
tacgtgcccgagtccagagagaggtaccagcaggtggagggctactacccggtggctcct
cacccggcgcagatcagaccttcgtacatcagagagacgccctacagccggctccctccc
ccgccccagccccaccccagcctggacgagctgcaccggagacggaaggaaataatggcg
cagctggaggaaaggaaggttatctcccctccgccgtttgcgccctcacccacgctgccc
ccgcccttccacccagaggaatttttggatgaagacttgaaggctgggaaatacaaagga
aatgattatagccagtactctccctggtcatgtgacaccatcggctcctacattggaacc
aaagatgcaaaacccaaagacgctgtggcagcagggagtgcggaaatgatgaacgtggag
agtaaaggcgtgcgagaccagcggctggaccaccagagaagagccaccgaaaccagtgac
gacgacctcatcccgtttggagaccggccgacagtctcgcggtttggtgccatctcgcga
acctccaaaacgatataccagggtgctggcccgttgcaggcgatggcacctcagggagct
cccacaaaatctatgaacatgtcagactacagcccgtacggagcccacggcggctggggc
ggctccccgtactccccgcaccagagcgcggcgccgcaggcacacttcggtgagagggag
agggcgtccacgtccgaagcggccagccacggaaagccccttccgcccgctgacagggag
cagctgcgcctggaactgcagcagctgaaccaccagatcagccggcagacccagctgcgc
ggaccggagagggaggcgagcaccctggcaagccagccgcaggccccgccagcaccgccg
aagtggcctggcatgatctcgagtgagcagctgagcctggaactgcaccaggtggagcgg
gaaatcgggaagagaacccgggagctgagcctggagaaccagtgttctctggacatgaaa
agcaaattgaatacaagtaagcaagcagaaaatggacagccggaaccccaaaataaggtt
ccagctgaggaccttacattgacattcagtgatgtacccaatggatcggccttgacacaa
gagaatatcggcctcctgtcaaaccagaccagctctctgaacctgtcggaggaccccgag
ggaggaggggacaacagcgactcccagaggccaggggtcgcgcccagccctgctccctga
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