Phyllostomus discolor (pale spear-nosed bat): 114512760
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Entry
114512760 CDS
T07739
Symbol
HMGB1
Name
(RefSeq) high mobility group protein B1
KO
K10802
high mobility group protein B1
Organism
pdic
Phyllostomus discolor (pale spear-nosed bat)
Pathway
pdic03410
Base excision repair
pdic04140
Autophagy - animal
pdic04217
Necroptosis
pdic04613
Neutrophil extracellular trap formation
Brite
KEGG Orthology (KO) [BR:
pdic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
114512760 (HMGB1)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
114512760 (HMGB1)
09143 Cell growth and death
04217 Necroptosis
114512760 (HMGB1)
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
114512760 (HMGB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pdic03036
]
114512760 (HMGB1)
03400 DNA repair and recombination proteins [BR:
pdic03400
]
114512760 (HMGB1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pdic04147
]
114512760 (HMGB1)
Chromosome and associated proteins [BR:
pdic03036
]
Eukaryotic type
Nucleosome assembly factors
HMG (high mobility group) proteins
114512760 (HMGB1)
DNA repair and recombination proteins [BR:
pdic03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
114512760 (HMGB1)
MMR (mismatch excision repair)
Other MMR factors
114512760 (HMGB1)
Exosome [BR:
pdic04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
114512760 (HMGB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box_2
HMG_box
HMG_WDHD1
NOA36
HMG_box_5
Nop14
Motif
Other DBs
NCBI-GeneID:
114512760
NCBI-ProteinID:
XP_028387607
UniProt:
A0A6J2N521
LinkDB
All DBs
Position
2:complement(114018467..114024261)
Genome browser
AA seq
215 aa
AA seq
DB search
MGKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKF
EDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL
SIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEK
SKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaaggagatcctaagaagccgagaggcaaaatgtcatcatatgctttctttgtg
caaacttgccgggaggagcacaagaagaagcacccagatgcttcagtcaacttctcagag
ttttctaagaagtgctcagagaggtggaagaccatgtctgctaaagagaaaggaaaattt
gaagacatggcaaaggcggacaaggcccgttatgaaagagaaatgaaaacttatattcct
cctaaaggggaaacaaaaaagaagttcaaggatcccaatgcacccaagaggcctccttcg
gcctttttcttgttttgttctgagtatcgccccaaaatcaaaggagagcatcccggccta
tccattggtgatgttgcaaagaagctgggagagatgtggaacaacactgctgcagatgac
aagcagccttatgaaaagaaggctgctaagctgaaggagaaatacgaaaaggatattgct
gcataccgagctaaaggaaagcctgatgctgcaaaaaagggagttgtcaaggctgaaaaa
agcaagaaaaagaaggaggaggaggaagatgaagaggatgaggaagatgaggaagaggag
gaagacgaagaagatgaagatgaagaagaagatgatgatgatgaataa
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