Phyllostomus discolor (pale spear-nosed bat): 114512963
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Entry
114512963 CDS
T07739
Symbol
COL2A1
Name
(RefSeq) collagen alpha-1(II) chain isoform X2
KO
K19719
collagen type II alpha
Organism
pdic
Phyllostomus discolor (pale spear-nosed bat)
Pathway
pdic04151
PI3K-Akt signaling pathway
pdic04510
Focal adhesion
pdic04512
ECM-receptor interaction
pdic04518
Integrin signaling
pdic04974
Protein digestion and absorption
pdic05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
pdic00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
114512963 (COL2A1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
114512963 (COL2A1)
04518 Integrin signaling
114512963 (COL2A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
114512963 (COL2A1)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
114512963 (COL2A1)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
114512963 (COL2A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
pdic00536
]
114512963 (COL2A1)
Glycosaminoglycan binding proteins [BR:
pdic00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
114512963 (COL2A1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
VWC
VWC2L_2nd
Motif
Other DBs
NCBI-GeneID:
114512963
NCBI-ProteinID:
XP_028387881
UniProt:
A0A6J2N7L3
LinkDB
All DBs
Position
2:167967672..167998500
Genome browser
AA seq
1487 aa
AA seq
DB search
MIRLGAPQMLVLLTLLVAAVLRCHGQDVQKAGSCVQDGQRYNDKDVWKPEPCRICVCDTG
TVLCDDIICEDMKDCLSPETPFGECCPICSTDLATASGQPGPKGQKGEPGDIKDIVGPKG
PPGPQGPAGEQGPRGDRGDKGEKGAPGPRGRDGEPGTPGNPGPPGPPGPPGPPGLGGNFA
AQMAGGFDEKAGGAQMGVMQGPMGPMGPRGPPGPAGAPGPQGFQGNPGEPGEPGVSGPMG
PRGPPGPPGKPGDDGEAGKPGKPGERGPPGPQGARGFPGTPGLPGVKGHRGYPGLDGAKG
EAGAPGVKGESGSPGENGSPGPMGPRGLPGERGRTGPAGAVGARGNDGQPGPAGPPGPVG
PAGGPGFPGAPGAKGEAGPTGARGPEGAQGPRGEPGTPGSPGPAGASGNPGTDGIPGAKG
SAGAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQG
APGPAGEEGKRGARGEPGGAGPIGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAG
PKGANGDPGRPGEPGLPGARGLTGRPGDAGPQGKIGPSGAPGEDGRPGPPGPQGARGQPG
VMGFPGPKGANGEPGKAGEKGLPGAPGLRGLPGKDGETGAAGPPGPAGPAGERGEQGAPG
PSGFQGLPGPPGPPGEGGKPGDQGVPGEAGAPGLVGPRGERGFPGERGSPGAQGLQGARG
LPGTPGTDGPKGASGPAGPPGAQGPPGLQGMPGERGAAGISGPKGDRGDVGEKGPEGAPG
KDGGRGLTGPIGPPGPAGANGEKGEVGPPGPAGTAGARGAPGERGETGPPGPAGFAGPPG
ADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPG
AAGRVGPPGSNGNPGPPGPPGPSGKDGPKGARGDSGPPGRAGDPGLQGPAGLPGEKGEPG
DDGPSGPDGPPGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGASGDRGPPG
PVGPPGLTGPAGEPGREGSPGADGPPGRDGAAGVKGDRGETGPLGAPGAPGPPGSPGPAG
PTGKQGDRGEAGAQGPMGPAGPAGARGIPGPQGPRGDKGETGEAGERGLKGHRGFTGLQG
LPGPPGPSGDQGASGPAGPSGPRGPPGPVGPSGKDGANGIPGPIGPPGPRGRSGETGPAG
PPGNPGPPGPPGPPGPGIDMSAFAGLGGREKGPDPMQYMRADQAAGNLRQHDAEVDATLK
SLNNQIESIRSPEGSRKNPARTCRDLKLCHPEWKSGDYWIDPNQGCTLDAMKVFCNMETG
ETCVYPNPANVPKKNWWSSKSKDKKHIWFGETINGGFHFSYGDDNLAPNTANVQMTFLRL
LSTEGSQNITYHCKNSIAYLDEAAGNLKKALLIQGSNDVEIRAEGNSRFTYTVLKDGCTK
HTGKWGKTMIEYRSQKTSRLPIIDIAPMDIGGPEQEFGVDIGPVCFL
NT seq
4464 nt
NT seq
+upstream
nt +downstream
nt
atgatccgcctcggggctccccagatgctggtgctgctgacgctgctcgtcgccgctgtc
cttcggtgccacgggcaggatgtccagaaggctggcagctgtgtgcaggacgggcagagg
tataatgataaggatgtgtggaagcccgagccctgccggatctgtgtctgtgacactggg
actgtcctctgcgacgacataatctgtgaagacatgaaagactgcctcagccccgagacc
cccttcggagagtgctgccccatctgctcaactgacctcgccactgccagtgggcaacca
ggaccaaagggacagaaaggagaacctggagacatcaaggatattgtaggacccaaagga
ccccctgggcctcagggacctgcaggtgaacaaggacccagaggtgatcgtggtgacaaa
ggtgaaaagggtgcccccggacctcgtggcagagatggagagcccgggacccctggaaat
cctggcccccctggccctcctggcccccctggtccccctggccttggtggaaacttcgct
gcccagatggctggaggatttgatgagaaggctggtggcgcccagatgggcgtaatgcag
ggaccgatgggccccatgggaccacgaggaccgccaggccctgctggtgctcccggccct
caaggatttcaaggcaaccctggtgaacctggggaacccggcgtgtcgggtcccatgggt
ccccgtggccctccaggcccccctggaaaacctggtgacgatggcgaagctggaaagcct
ggaaaacctggtgaacgaggccctcctggccctcagggtgctcgtggcttcccgggaacc
ccaggccttcctggtgtcaaaggtcacagaggttacccaggcctggacggtgctaaaggc
gaagctggtgctccaggtgtgaagggagagagcggctcccccggcgagaatggctctcca
ggcccgatgggtccccgtggtctgcctggcgagagaggacggaccggccctgcaggcgct
gtgggtgcccggggcaacgacggtcaaccaggccccgcagggcctccgggtcccgtgggt
cctgctggcggccctggcttccctggggctcccggtgccaagggtgaagctggtcccacc
ggtgctcgtggtcctgaaggcgctcaaggtcctcgcggtgaacctggcactcctgggtcc
cccgggccggctggggcctctggtaaccctggaacagacggaattcctggagccaaaggg
tctgctggtgctcctggcatcgcgggtgctcctggcttccctgggccacgtggtcctccc
ggccctcaaggtgcaactggtcctttgggcccgaaaggtcagacgggcgagcctggtatt
gctggcttcaaaggcgagcaaggccccaagggagaacctggccccgctggcccccaagga
gcccccggtcctgctggtgaagaaggcaaaagaggtgcccgtggagagcctggtggtgct
gggcccatcggtcccccgggagaaagaggtgctcctggcaaccgaggcttccctggtcag
gatggtctggcaggtcccaagggagcccctggagagcgagggcccagtggcctggctggc
cccaagggagccaacggtgaccctggccgacccggagagcctggccttcctggagcccgg
ggtctcactggccgccccggtgatgctggtcctcaaggcaaaattggtccttctggagcc
cctggcgaagacggtcgccctgggcctccaggtcctcagggggctcgtgggcagcctggc
gtcatgggtttccctggccccaaaggtgccaatggcgagccagggaaagctggtgagaaa
ggactgcccggtgctcctggcctaaggggtcttcctggcaaagatggagagacaggtgct
gcaggcccccctggacccgctggacctgctggtgaacgaggcgagcagggtgctcccggg
ccatctgggttccagggacttcctggccctcccggtcccccaggtgaaggtggaaaacca
ggagaccagggcgttcccggtgaagctggagcccccggcctcgtgggccccagaggtgaa
cgaggcttcccaggtgaacgtggctctcctggtgcccaaggcctccagggggcccgtggt
ctccccggcactcctggcactgatggccccaaaggtgcatctggccccgctggaccccct
ggggctcagggccctccaggcctgcagggcatgcccggtgagaggggagcagctggtatt
tctgggcccaagggagacaggggtgatgttggtgagaaaggccctgagggagcccccggg
aaggatggtggacgaggtctgacaggccccatcggcccccctggacctgctggtgccaat
ggcgagaagggagaagttggccctcccggtcctgcaggaacagctggtgcccgtggtgcc
cctggcgaacgtggagagactgggcccccaggacccgctggattcgcaggtcctcctggt
gctgatggccagccaggtgccaagggcgagcaaggagaggcgggccagaaaggtgacgct
ggtgccccaggtcctcagggcccctccggagctcctgggcctcagggtcccaccggtgtg
actggtcctaaaggagcccgaggtgcacaaggccccccgggagccaccgggttccccgga
gctgctggccgcgtcggacccccaggctccaatggtaaccctggaccccctggtccccct
ggtccttctggaaaagatggtcctaaaggtgcccgaggagacagtggcccccctggccga
gctggtgaccctggcctccaaggtcctgccggactccctggcgagaagggagagcctgga
gatgatggtccctctggtcccgacggtcctccaggcccccagggtctggctggtcagagg
ggcatcgttggtctccccgggcagcgtggtgagaggggattccccggcctgcctggccca
tcgggtgagcctggcaagcagggagctcctggtgcgtctggagacagaggtccccctggc
cccgtgggtcctcctggcctaactggtcctgctggtgagcctggacgagagggaagccct
ggtgctgacggcccccccggcagagatggtgcagctggagtcaagggtgatcgtggtgag
actggtcccttgggtgctcctggagcccctgggccccccggctctcctggccccgccggc
ccaactggcaagcagggagaccgaggagaagctggtgcgcaaggacccatgggaccagca
ggaccagcgggagcccgaggaatcccaggccctcaaggcccccgaggtgacaaaggagaa
actggagaggccggcgagagggggctgaagggacaccgtggcttcactggtctgcagggt
cttcccggccctcctggtccttctggagaccaaggtgcttctggtcctgctggtccttct
ggccctagaggtcctcctggccccgtcggtccctctggcaaagatggtgctaatggaatt
cctggccccattgggcctcctggcccccgtggacgttcaggagaaacaggccctgcgggt
cctcctggaaatcctggaccccctggccctccaggtccccctggccctggcattgacatg
tcagcctttgccggcttaggcgggagagagaaaggtcccgaccccatgcagtacatgcgg
gccgaccaggcagccggcaacctgaggcagcatgacgccgaggtggatgccacactcaag
tccctcaacaaccagattgagagcatccgcagccccgagggctcccgcaagaaccctgct
cgcacctgccgggacctgaaactctgccaccctgaatggaagagcggagactactggatc
gaccccaaccagggctgcaccttggacgccatgaaggttttctgcaacatggagactggc
gagacctgcgtctaccccaacccagcgaacgttcccaagaagaactggtggagcagcaag
agcaaggacaagaaacatatctggtttggagaaaccatcaacggtggcttccacttcagc
tatggggatgacaacctggctcccaacactgccaacgtccagatgaccttcctgcgcctg
ctgtccaccgagggctcccagaacatcacttaccactgcaagaacagcatcgcctacctg
gacgaagcagctggcaacctcaagaaggccctgctcattcagggttccaacgacgtggag
atccgggcagagggcaacagcaggttcacgtacaccgtcctgaaggatggctgcacgaaa
cacaccggtaagtggggcaagactatgatcgagtaccggtcgcagaagacctcgcgcctc
cccatcattgacattgcacccatggacatcggagggcccgagcaggaatttggtgtggac
atagggcctgtctgcttcttgtaa
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