Phyllostomus discolor (pale spear-nosed bat): 114514095
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Entry
114514095 CDS
T07739
Symbol
SMARCC2
Name
(RefSeq) SWI/SNF complex subunit SMARCC2 isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
pdic
Phyllostomus discolor (pale spear-nosed bat)
Pathway
pdic03082
ATP-dependent chromatin remodeling
pdic04714
Thermogenesis
pdic05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
pdic00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
114514095 (SMARCC2)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
114514095 (SMARCC2)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
114514095 (SMARCC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pdic03021
]
114514095 (SMARCC2)
03036 Chromosome and associated proteins [BR:
pdic03036
]
114514095 (SMARCC2)
Transcription machinery [BR:
pdic03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
114514095 (SMARCC2)
Chromosome and associated proteins [BR:
pdic03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
114514095 (SMARCC2)
PBAF complex
114514095 (SMARCC2)
GBAF(ncBAF) complex
114514095 (SMARCC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_3
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
Chromo
Motif
Other DBs
NCBI-GeneID:
114514095
NCBI-ProteinID:
XP_028389167
UniProt:
A0A6J2N9L4
LinkDB
All DBs
Position
2:161107575..161127601
Genome browser
AA seq
1237 aa
AA seq
DB search
MAVRKKDGGPNVKYYEAADTVTQFDNVRLWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ
EEVFGKHVSNAPLTKLPIKCFLDFKAGGSLCHILAAAYKFKSDQGWRRYDFQNPSRMDRN
VEMFMTIEKSLVQNNCLSRPNIFLCPEIEPKLLGKLKDIIKRHQGTVTEDKNNASHVVYP
VPGNLEEEEWVRPVMKRDKQVLLHWGYYPDSYDTWIPASEIEASVEDAPTPEKPRKVHAK
WILDTDTFNEWMNEEDYEVNDDKAPVSRRKKISAKTLTDEVNSPDSDRRDKKGGNYKKRK
RSPSPSPTPEAKKKNAKKGPSTPYTKSKRGHREEEQEDLTKDMDEPSPVPNVEEVTLPKT
VNTKKDSESAPVKGGTMTDLDEQEDESMETTGKDEDENSTGNKGEQTKNPDLHEDNVTEQ
THHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEY
LTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLADTPSG
LVPLQPKTPQGRQVDADTKAGRKGKELDDLVPETAKGKPELQTSASQQMLNFPDKGKEKP
TDMQNFGLRTDMYTKKNVPSKSKAAASATREWTEQETLLLLEALEMYKDDWNKVSEHVGS
RTQDECILHFLRLPIEDPYLEDSEASLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVA
SAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADPAFGLESSGIAGTTSDEPE
RIEESGTDEARAEGQATEEKKEPKEPREGVGAVEEEVKEKTSEAPKKDEEKGKEGDSEKE
SEKNDGDPIVDTEKEKEPKEGQEEVLKEVVESEGERKTKVERDIGEGNLSTAAAAALAAA
AVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLA
DRQAFHMEQLKYAEMRARQQHFQQMHQQQQQPPPALPPGSQPIPPTGAAGPPTVHGLAMA
PASVAPAPPGSGAPPGSLGPSEQIGPQQQQPAGAPQPGAVPPGVPPPGPHGPSPFPNQQT
PPSLMPGAVPGSGHPGVAGNAPLGLPFGMPPPPPPAPSIIPFGSLADSISINLPPPPNLH
GHHHHLPFAPGTLPPPNLPVSMANPLHPNLPATTTMPSSLPLGPGLGSAAAQSPAIVAAV
QGNLLPSASPLPDPGTPLPPDPTAPSPGTVTPVPPPQ
NT seq
3714 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcggaagaaggacggcggccccaacgtgaagtactacgaggccgcggacaca
gtgacccagttcgacaacgtgcggctctggctcggcaagaactacaagaagtatatacaa
gctgaaccacccaccaacaagtccctgtctagcctggttgtacagttgctacaatttcag
gaagaagtttttggcaaacatgtcagcaatgcaccgctcactaaactgccgatcaaatgt
ttcctagatttcaaagcaggaggctctctgtgccacatacttgcagctgcctacaaattc
aagagtgaccagggatggcggcgttacgacttccagaatccatcacgcatggaccgcaat
gtggaaatgttcatgaccattgagaagtccttggttcagaataattgcctgtctcgacca
aacatttttctatgcccagaaattgaacccaagctgctaggcaaactaaaggacattatc
aagagacatcagggaacggtcactgaagataagaacaatgcttcccatgttgtgtatcct
gtcccagggaacctggaagaagaggaatgggtacgacccgtcatgaagagggataagcag
gttcttctgcactggggctattacccggacagttacgacacgtggatcccagccagtgaa
atcgaagcttctgtggaagatgctccaactcctgagaaacccaggaaggttcacgcaaag
tggatcctggacacagacaccttcaatgaatggatgaatgaggaagactatgaagtaaat
gacgacaaagcccctgtctctcgccgaaagaagatttcagccaagacattgacagatgag
gtgaacagccccgattcagatcgacgggacaaaaagggggggaactataagaagaggaag
cgctccccctctccttcaccaaccccagaagctaagaagaaaaatgctaaaaaagggccc
tcaacaccttacacgaaatccaagcgtggccacagagaagaggagcaagaagacctaaca
aaggacatggatgagccctccccggtccccaacgtagaagaggtgacattgcccaaaaca
gtcaacactaagaaggactcggagtcagccccagtcaaaggaggcaccatgaccgacttg
gatgaacaggaggatgaaagcatggagaccacgggcaaggatgaggatgagaacagtacg
gggaacaagggggagcagaccaagaacccggacctgcatgaggacaacgtgacagagcag
acccaccacatcatcattcccagctatgcagcctggtttgactataatagtgttcatgcc
attgagcggagggctctcccagagttcttcaacggcaagaacaagtccaagactccagaa
atctacctggcctatcgcaacttcatgattgacacctaccgcctgaacccccaagagtat
ctcacctccaccgcctgccgcaggaacctggcaggcgacgtctgtgccatcatgagggtc
catgccttcctagaacagtggggtctcattaactaccaggtggacgctgagagtcgacca
accccaatggggcctccacccacttctcacttccacgtcttggcagacacaccctcgggg
ctagtgcctctgcagcccaagaccccacagggccgccaggttgatgctgacaccaaagct
gggcgcaagggcaaagagctggacgacctggtgccagagaccgctaagggcaagccagag
ctgcagacctctgcttcccaacaaatgctcaacttccctgacaaaggcaaagagaaacca
acagacatgcagaacttcgggctacgcacagacatgtatacaaagaagaacgtcccctcc
aagagcaaagctgcggccagtgccactcgagagtggacggaacaggagaccctgctactc
ctggaggcactggaaatgtacaaagacgactggaacaaggtatccgagcacgtggggagc
cgcacgcaggatgagtgcatcttgcattttctccgtctccccatcgaagacccgtacttg
gaagactcggaggcctctctgggccccctggcctaccagcccatccccttcagtcagtcc
ggcaaccctgtgatgagcactgttgccttcctggcctctgtcgtcgatcctcgagtcgcc
tctgctgccgcgaagtcagctctagaggagttctccaaaatgaaggaagaggtacccacc
gccttggtggaagcccacgttcggaaggtggaggaagcagccaaagtgacaggcaaggca
gaccctgcctttggtttggaaagtagtggtattgccggaaccacctctgatgagcctgaa
cggatcgaggagagcgggactgacgaggcgcgggcggagggccaggccacagaggagaag
aaggagcccaaggaacctcgagaaggagtcggggctgtagaggaagaagtgaaggagaag
accagcgaggctcccaaaaaggatgaagagaaagggaaagaaggtgacagtgagaaggag
tcagaaaagaatgatggggaccccatagttgacactgagaaggagaaggaaccgaaggag
gggcaggaggaagtgctgaaggaagtggtggagtcggagggggaaaggaagaccaaggtg
gagcgggacatcggtgagggcaatctctccactgctgctgctgccgcgctggctgccgcc
gccgtgaaggccaagcacttggctgccgttgaggagaggaagatcaagtctctggtggcc
ctactggtggagactcagatgaagaagctggagatcaaacttcggcactttgaggagctg
gagacgatcatggaccgagagcgagaagcactggagtatcagaggcagcagctcctggcc
gacaggcaagctttccacatggagcagctgaagtatgcggagatgagggctcggcagcag
cacttccaacaaatgcaccaacagcagcagcagccaccgccagccctgcccccaggctcc
cagcctatcccacctacaggcgctgctgggccacccacggtccatggcttggctatggct
ccggcctctgtggcccctgcccctcctggcagtggggcccctcctggaagcttgggcccc
tctgaacagattgggccacagcagcagcaaccagccggagccccgcagccaggggcagtc
ccaccaggggtaccaccccctggaccccatggcccctcaccgttccccaaccaacaaact
cctccctcattgatgccaggggcagtgccaggcagcgggcacccaggcgtggcgggtaat
gctcctttgggtttgccttttggcatgccgcctcctcctcctcctgctccatccatcatc
ccatttggtagtctagccgactccatcagtattaaccttccccctcctcctaacctgcat
gggcatcaccaccatctcccatttgccccgggcactctccccccacctaacttgcctgtg
tccatggcgaaccctctacatcctaacctgccggcgaccaccaccatgccatcttccttg
cctctcgggccggggctcggatccgccgcagcccagagccctgccattgtggcagctgtt
cagggcaacctcctgcccagtgccagcccactgccagacccaggcacccccctgcctcca
gaccccacggccccgagcccaggcacggtcactcctgtgccacctccacagtga
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