Paracoccus sediminicola: PAF18_00040
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Entry
PAF18_00040 CDS
T09284
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
pdim
Paracoccus sediminicola
Brite
KEGG Orthology (KO) [BR:
pdim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pdim03032
]
PAF18_00040
03036 Chromosome and associated proteins [BR:
pdim03036
]
PAF18_00040
03400 DNA repair and recombination proteins [BR:
pdim03400
]
PAF18_00040
DNA replication proteins [BR:
pdim03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
PAF18_00040
Chromosome and associated proteins [BR:
pdim03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
PAF18_00040
DNA repair and recombination proteins [BR:
pdim03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
PAF18_00040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
DUF2267
HU-CCDC81_euk_2
Poly_export
Motif
Other DBs
NCBI-ProteinID:
WBU56875
LinkDB
All DBs
Position
complement(10113..10409)
Genome browser
AA seq
98 aa
AA seq
DB search
MAQAVKPMTKTQFVATLAEEMGSDKKSAAAALDAIAAVVTREVSNGGAVTLPGIGKVACR
ARPERQVRNPQTQEMMTKPADKQVKVTVAKALKDSVNA
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atggctcaagccgtcaagccgatgaccaagacgcaattcgtcgccacgctcgccgaagag
atgggcagcgacaagaaatccgccgccgccgctctggacgcgattgcggctgtggtaacc
cgtgaagtttccaatggcggcgccgtgacccttccgggcatcggcaaggttgcctgccgc
gcccgccccgagcgtcaggtccgcaacccgcagacccaggaaatgatgaccaagccggcc
gacaagcaggtcaaggtcaccgtcgccaaggcgctcaaggacagcgtcaacgcctga
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