Paracoccus sediminicola: PAF18_00105
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Entry
PAF18_00105 CDS
T09284
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
pdim
Paracoccus sediminicola
Pathway
pdim00220
Arginine biosynthesis
pdim00240
Pyrimidine metabolism
pdim00250
Alanine, aspartate and glutamate metabolism
pdim01100
Metabolic pathways
pdim01110
Biosynthesis of secondary metabolites
pdim01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
pdim00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
PAF18_00105 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
PAF18_00105 (carB)
00220 Arginine biosynthesis
PAF18_00105 (carB)
Enzymes [BR:
pdim01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
PAF18_00105 (carB)
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
CPSase_L_D3
MGS
ATP-grasp_3
ATP-grasp
ATPgrasp_Ter
Dala_Dala_lig_C
RimK
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
WBU56887
LinkDB
All DBs
Position
22826..26161
Genome browser
AA seq
1111 aa
AA seq
DB search
MPKRTDIKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEM
ADATYIEPITPDMVEKIIADERPDALLPTMGGQTALNTALALADAGVLNKYGVELIGAQR
AAIEMAEDRKLFREAMDRIGLENPKATIVTAPKDAKGRFDLEAGVQTALDALDDIGLPAI
IRPAFTLGGTGGGVAYNREDYIHFCRSGMDASPVGQILVDESLLGWKEYEMEVVRDHADN
AIIVCSIENVDPMGVHTGDSITVAPALTLTDREYQRMRNGSIAVLREIGVETGGSNVQWA
INPDDGRMVVIEMNPRVSRSSALASKATGFPIAKIAAKLAVGYTLDELDNDITKVTPASF
EPSIDYVVTKIPRFAFEKFPGSKPELTTAMKSVGEVMAIGRTFHESLQKALASMENGLTG
LDEIDIPGAADEGKPAIIRALAKQTPDRIRVIAQAMREGMTDDEIHNVTAFEPWFLARIR
EIVEAENEVRSNGLPGTEGLRRLKMMGFSDTRLATLTGLAEAEIRRTRHNQGINPVFKRI
DTCAAEFEAQTPYMYSTYESPAMGEVENEARPSDRKKVVILGGGPNRIGQGIEFDYCCCH
ACFALTDAGYETIMVNCNPETVSTDYDTSDRLYFEPLTLEHVLEILSIEQENGTLHGVIV
QFGGQTPLKLANDLEAAGIPILGTSPDAIDLAEDRERFQKMLNELGLKQPVNGIAHSDDE
ARAIAEKVGFPLVIRPSYVLGGRAMEIVRDMDHLNRYITHAVDVSGKNPVLLDSYLSGAI
EVDVDALSDGETVHVAGIMEHIEEAGVHSGDSACSLPPHTLDAATIDELKRQTVAMAKKL
GVVGLMNVQFAIKNGEIFVLEVNPRASRTVPFVAKATDSAIASIAARLMAGEPMSAFPAR
EPYPDGVGPEDDLPFADPLTLADPLTPWYSVKEAVLPFARFPGVDTLLGPEMRSTGEVMG
WDRNFPRAFLKAQLGAGTQLPSGGAVFISIRDADKTEAVARAARDLVEMGFSIIATSGTA
AFLAGHDVASSRVNKVYEGRPNIVDRLKNGEIAMVLNTTEGAQAIADSREIRAVALYDKI
PYYTTAAGSIAAVAAIKSREEGEVGVRSLQA
NT seq
3336 nt
NT seq
+upstream
nt +downstream
nt
atgccgaagagaaccgacatcaagtccatcctcatcatcggcgccggtcccatcgtcatc
gggcaggcttgcgaattcgactattccggggctcaggcctgcaaggcgcttcgcgaggaa
gggtatcgggtcatcctggtgaactcgaacccggccacgatcatgaccgatcccgagatg
gccgatgccacctatatcgagccgattaccccggatatggtcgaaaagatcattgctgac
gaacggcccgacgcgctcttgccgacgatgggtgggcagaccgcgctgaacaccgcgctg
gcgctggctgatgccggggtgctgaacaaatacggggtcgagctgatcggcgcgcagcgc
gccgccatcgaaatggccgaggaccgcaaactgttccgcgaggcgatggatcggatcggg
ctcgaaaaccccaaggcgaccatcgtcactgcgccgaaagacgccaagggcaggttcgat
cttgaggccggggtgcagaccgcgctcgacgcgctcgatgatatcgggctgcctgcgatt
atccgccctgccttcactcttggcggcacaggtggcggcgtcgcctataaccgtgaggat
tacatccatttctgccgctcgggcatggatgcctcaccggtcggtcagatccttgtcgat
gaatcgctgctcggctggaaggaatacgagatggaggtggtgcgagatcatgccgacaac
gccatcatcgtctgctccattgaaaacgtcgatccgatgggcgtccataccggcgattcg
atcaccgtcgcgccggcgctgaccctgaccgaccgcgaatatcagcggatgcggaacggc
tcgattgcggtgctgcgcgaaatcggggtcgagaccggcggatcgaacgtgcaatgggcg
atcaaccccgatgacggccgcatggtggtgatcgagatgaacccgcgggtcagccgctca
tccgcgctggcctcgaaggcgactggctttcccatcgccaagatcgccgcgaagctcgcc
gtgggctatacgctggatgagctggacaatgacatcaccaaggtcacgccggccagtttc
gaacccagcatcgactatgtcgtgaccaagatcccgcgtttcgcgttcgagaaatttcca
ggcagcaagcccgaactgaccactgcgatgaagtccgtgggcgaggtcatggccatcggc
cggacctttcatgaatcgctgcaaaaggcgctggcctcgatggaaaacggcctgacgggg
ctggacgaaatcgacatccccggcgccgcggatgagggcaagcccgcgatcatccgcgct
cttgcgaaacagaccccggaccgcatccgcgtgatcgcgcaggccatgcgcgaaggcatg
acggatgacgaaatccacaatgtcaccgcgttcgagccgtggttcctcgcccgtatccgc
gaaatcgtggaggctgagaacgaggtccgcagcaacggcctgcccggcaccgaagggctg
cggcgcctgaaaatgatgggtttttccgacacccgcctcgccacgctgaccggtctcgcc
gaagccgaaattcgtcgcacgcgccacaatcagggcatcaatccggtcttcaaacgcatc
gacacctgcgccgccgagttcgaggcgcagacgccctatatgtattcgacctatgaatcc
ccggcgatgggtgaggtcgagaatgaggcgcgcccctcggatcgcaagaaggtcgtcatt
ctcggcggcggcccgaaccggatcgggcaggggatcgagttcgattactgctgctgccac
gcctgtttcgcgctgaccgatgcgggctatgaaaccattatggtcaactgcaacccggaa
accgtctcgaccgattacgacacctcggaccggctgtatttcgaaccgctgacgctggaa
catgtccttgaaatcctgtccatcgaacaggaaaacggcacgctgcacggcgtcatcgtg
cagttcggcggccagaccccgctgaagctggccaatgatctggaggccgcaggtatcccg
atcctcggcacctcgcccgacgccatcgacctggccgaggatcgtgagcggttccagaag
atgctgaatgaattgggcctgaaacagcccgtcaacggcatcgcccacagcgacgacgaa
gcccgagccatcgccgaaaaggtcggtttcccgctggtcatccgcccctcttatgtgctc
ggcggccgcgcgatggagattgtgcgggatatggaccatctcaaccgctacatcacccat
gcggttgacgtgtcgggcaagaacccggtgctgctcgacagctatctgagcggcgcgatc
gaggtggatgtcgacgcgctttcggacggcgagacggtccatgtcgccggcatcatggaa
catatcgaggaagccggcgtccattccggcgattcggcctgttcgctgccgccgcacacg
ctggatgcggcgaccattgacgaactcaagcgccagaccgtcgcaatggcgaagaaactg
ggcgttgtcgggctgatgaacgtccagttcgccatcaagaacggcgaaatcttcgtgctt
gaggtcaacccccgcgcctcgcgcacggtccccttcgtcgccaaggccaccgacagcgcc
atcgcttccatcgccgcccggctgatggcgggcgagccgatgtcggccttccccgcccgc
gagccctatcccgacggcgtcggccccgaggatgatctgcccttcgccgacccgctgacg
ctcgccgacccgctcaccccatggtattccgtgaaagaggcggtgctgcctttcgcccgt
ttccccggcgtggacacgctgctggggccggaaatgcgctccaccggagaggtgatgggc
tgggaccgcaatttcccccgcgctttcctcaaggcccagctcggtgccggcacgcagctg
ccgtcagggggggcggtgttcatctctatccgcgacgctgacaagaccgaagccgtggcc
cgcgccgcgcgcgatctggtcgagatggggttttcgatcatcgcgaccagcggaacggcc
gccttccttgccggtcatgacgtcgcatccagccgggtgaacaaggtctacgagggccgt
ccgaacatcgtcgaccgcctgaagaacggcgagatcgcgatggtcctgaacacgaccgag
ggcgcccaggccatcgctgacagccgcgaaatccgggccgtcgcgctgtatgacaagatc
ccgtattacacgacggcggcgggcagcatcgcggccgtcgcagcgatcaagtcgcgtgag
gaaggggaagtcggggtgaggtcgctgcaggcttga
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