KEGG   Paracoccus sediminicola: PAF18_00420
Entry
PAF18_00420       CDS       T09284                                 
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
  KO
K01710  dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
Organism
pdim  Paracoccus sediminicola
Pathway
pdim00521  Streptomycin biosynthesis
pdim00523  Polyketide sugar unit biosynthesis
pdim00525  Acarbose and validamycin biosynthesis
pdim00541  Biosynthesis of various nucleotide sugars
pdim01100  Metabolic pathways
pdim01110  Biosynthesis of secondary metabolites
pdim01250  Biosynthesis of nucleotide sugars
Module
pdim_M00793  dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:pdim00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00541 Biosynthesis of various nucleotide sugars
    PAF18_00420 (rfbB)
  09109 Metabolism of terpenoids and polyketides
   00523 Polyketide sugar unit biosynthesis
    PAF18_00420 (rfbB)
   01055 Biosynthesis of vancomycin group antibiotics
    PAF18_00420 (rfbB)
  09110 Biosynthesis of other secondary metabolites
   00521 Streptomycin biosynthesis
    PAF18_00420 (rfbB)
   00525 Acarbose and validamycin biosynthesis
    PAF18_00420 (rfbB)
Enzymes [BR:pdim01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.46  dTDP-glucose 4,6-dehydratase
     PAF18_00420 (rfbB)
SSDB
Motif
Pfam: GDP_Man_Dehyd Epimerase RmlD_sub_bind Polysacc_synt_2 NAD_binding_4 3Beta_HSD adh_short NmrA NAD_binding_10 Sacchrp_dh_NADP
Other DBs
NCBI-ProteinID: WBU56946
LinkDB
Position
complement(87265..88302)
AA seq 345 aa
MKILVTGGAGFIGSAVIRQAIRDGHQVVNLDALTYAANLRNVDSVAGAPGYAFEHADIRD
RAALDRILAAHRPDAVMHLAAESHVDRSIDGPGAFIDTNVTGSYHLLEAARAYWVAAGRP
AQFRFHHVSTDEVFGSLGPEGRFTEDSPYDPRSPYSASKAASDHLVRAWHETYGLPVLLS
NCSNNYGPFHFPEKLVPVVILKALEGAPIPVYGDGGNIRDWLFVEDHADALLTVLTRGEV
GRSYHIGGESEARNIDLVRMICAHMDERRPDHAPHENLITFVPDRPGHDRRYAIDPSRIR
DELGWRPSVSLEEGLRRTVDWYLEHGDWWRPLLTRDGVGMRLGTG
NT seq 1038 nt   +upstreamnt  +downstreamnt
atgaagatcctcgtcaccggcggggcggggttcatcggctcggccgtgatccggcaggcg
atccgggacgggcatcaggtcgtcaatctcgacgcgctgacctatgccgcaaatcttcgc
aatgtcgacagcgtcgccggggcgccgggctatgccttcgaacatgccgatatccgggac
cgcgccgcgcttgatcgtatacttgccgcgcatcgacccgacgcggtgatgcatcttgcc
gccgaaagccatgtcgaccgctcgatcgacgggccgggtgccttcatcgacaccaatgtg
accggcagctatcatcttctcgaagctgcccgcgcctattgggttgcggcgggccgaccc
gcgcagttccggtttcatcatgtatcgaccgacgaggtcttcggctcgctcgggccagag
gggcggttcaccgaggacagcccctatgacccgcgcagcccctattcggccagcaaggcg
gcgagcgatcatctcgtccgagcctggcacgaaacctatgggctgccggtcctgctcagc
aattgctcgaataattacgggccgttccacttccccgaaaagctggtgccggtggtgatc
ctcaaggcactcgagggggcgccgatcccggtctatggcgatggcgggaatatccgcgac
tggctgttcgtcgaggaccacgccgatgcgctgctgacagtgctgacccgaggcgaagtc
gggcgcagctatcatatcggcggcgagagcgaggcccgcaatatcgacctcgtccgtatg
atctgcgctcatatggacgaacggcgcccggatcatgcgccccatgagaatctcatcacc
ttcgtgcccgaccgccccggccatgaccgccgctatgccatcgacccgagccgcattcgc
gacgagctcggctggcgcccgtcggtctcgctcgaagaagggctgcgacgcaccgtggac
tggtatctggaacatggcgactggtggcgcccgcttctcactcgcgacggggtcggcatg
cggctggggaccgggtga

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