Paracoccus sediminicola: PAF18_01105
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Entry
PAF18_01105 CDS
T09284
Symbol
murF
Name
(GenBank) UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
KO
K01929
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:
6.3.2.10
]
Organism
pdim
Paracoccus sediminicola
Pathway
pdim00300
Lysine biosynthesis
pdim00550
Peptidoglycan biosynthesis
pdim01100
Metabolic pathways
pdim01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
pdim00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PAF18_01105 (murF)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PAF18_01105 (murF)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
PAF18_01105 (murF)
Enzymes [BR:
pdim01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
PAF18_01105 (murF)
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GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
WBU57078
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Position
218355..219734
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AA seq
459 aa
AA seq
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MALWNAQDAALATGGRISGDWQVDGVSIDTRSIVAGDLFVALKDQRDGHDYVAQALEKGA
GAALVSRIPDGVARDAPLLIVDDVLGALEDLGRAGRARMRGKVIGVTGSVGKTSTKEMLR
AALAGQGKVHAAEASYNNHWGVPLTLARMPEDSDFAIIEIGMSNPGEIAPLAHLARPHAA
LITTIAAAHIGAFGSLDGIAREKAAIFEGLVPAGAAIIPTGLSTTDILRDAADAAGAPIL
SFGDEGEARLISSTPEGESLQIRAALSGKPISFTLKSVGPHFAANAIGVLATVSAIGADV
IEAAKSLGDWVPPMGRGRVEALGQLRIIDDAFNANPSSMRAGLGTLARLPGERRVAILGD
MLELGPDEADQHRALASDPAMNAVDLVHAAGPLMRHLFDALPEAKRGIWSESADDLAARL
DELIQPGDTVIVKGSKGSYISRVVEAMRKAGNTATATGT
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggcgttgtggaacgcgcaggatgccgccctggcgaccggaggccgcatctccggcgac
tggcaggtggacggggtcagcatcgacacccgttccatcgtggcgggcgatctgttcgtg
gcgctgaaggatcagcgggacggtcacgattacgttgcgcaggctttggaaaaaggggcg
ggtgctgcgcttgtcagccgaatccccgacggcgtcgcacgggacgcgccgctgctgatc
gtggatgacgtgctgggcgcgctagaagatctcggccgggcagggcgcgcgcggatgcgg
ggcaaggtgatcggcgtgaccggatcggtcggcaagacctccacgaaagagatgctgcgc
gccgctctggccgggcagggcaaagtccatgctgccgaggcctcctataataatcattgg
ggcgtgccgctgacactggcgcggatgccggaagacagcgacttcgccataatcgagatc
gggatgagcaatcccggcgagatcgcgccgctggcgcatctggcgcggccccatgcggcg
ctgattaccaccatcgccgctgctcatatcggggccttcgggagccttgacgggatcgcg
cgggaaaaggcggcgatcttcgaggggctggttcccgcaggcgccgcgatcatcccgacg
gggctgtcgaccaccgatatcctgcgcgatgccgccgacgcggccggcgcgccgatcctg
tcctttggggatgagggcgaggcgcggctgatttcctcaacccccgagggagagagcctc
cagatccgcgcggcgctatcgggcaagccgatcagtttcaccctgaaatcggtcggtccg
catttcgccgccaacgccatcggcgtgctggcgacggtcagcgcaatcggcgcggatgtg
atcgaggcggcgaaatccctgggcgactgggtgccacccatggggcggggccgggtcgag
gcgctgggtcagctccgcatcatcgatgatgcgttcaacgccaatcccagctcgatgcgc
gccgggcttggcacgctcgcccggctgcccggcgaacggcgcgtcgcaatattgggcgac
atgctggaactgggccccgatgaggccgatcagcaccgcgcgctggccagcgaccccgcc
atgaatgccgtcgatctggtgcacgccgccgggccgctgatgcgccatctcttcgatgcg
ctgcccgaggccaagcgcggcatctggtcggaaagcgccgacgatctcgccgcgaggctg
gacgagctgatccagcccggcgatacggtgatcgtcaagggctcgaaaggttcttatatc
agccgcgtcgtcgaggcgatgcgcaaggccgggaacacggccaccgcaacggggacataa
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