Paracoccus sediminicola: PAF18_01115
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Entry
PAF18_01115 CDS
T09284
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
pdim
Paracoccus sediminicola
Pathway
pdim00470
D-Amino acid metabolism
pdim00550
Peptidoglycan biosynthesis
pdim01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pdim00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PAF18_01115 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PAF18_01115 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pdim01011
]
PAF18_01115 (murD)
Enzymes [BR:
pdim01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
PAF18_01115 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
pdim01011
]
Precursor biosynthesis
Amino acid ligase
PAF18_01115 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
2-Hacid_dh_C
MurD-like_N
TrkA_N
KARI_N
NAD_binding_2
AdoHcyase_NAD
ApbA
Motif
Other DBs
NCBI-ProteinID:
WBU57080
LinkDB
All DBs
Position
220908..222302
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AA seq
464 aa
AA seq
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MIPVKGVSGQTIAVLGLGRSGRATAAALTAGEARVVVWDDGQEARAQAEAEGLELRDLTR
EAEWNGISALITSPGIPHLYPDPHPVIAKALALGIPVDNDIGLFFRSFAAPDWDRFATTP
KIVTVTGSNGKSTTAALIHHILTSSGRPSQIGGNIGTGVLSLEPAHDCEVVVLELSSYQT
DLARALTPDVAVFTNLSPDHLDRHGGPGGYFAAKRRLFAEGGPDRCVIGVDEVEGRYLAN
QMGQGPGDDRVIRVSSGQKLENFAWGVFARKGFLSEYRKGRQVASVDLRAITGLPGAHNH
QNACAAYAACRAVGLAPREIEAAFHSFGGLPHRSQTIRELDGVRYVNDSKATNIDAAGQA
LQAFKRIRWIAGGLGKDGGISGLQPHFGNVVKAYLIGHSARDFALQLGATPHEVVETMDE
AVSRAHAEATSGETVLLAPAAASFDQYPNFEKRGEHFTALVNAL
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgatccccgtcaaaggcgtttcagggcagaccatcgccgttctcgggcttggccgctcg
ggcagggcgaccgccgctgcgctcacggccggcgaggctcgggtcgtggtttgggatgac
gggcaagaggcacgcgcgcaggccgaggccgaggggctggagctgcgcgacctgacccgc
gaggcggagtggaacggtatttcggcgctgatcacctcgcccggtatcccgcatctctat
cccgatccgcatccggtgatcgccaaggcgcttgcgctcgggatcccagtggataacgat
attggacttttctttcgcagcttcgccgcgccggactgggatcgctttgccaccacgcca
aaaatcgtcaccgtgacgggctcgaacgggaaatccaccactgcggcgctgatccatcat
atcctgacatcgtcgggccgcccgagtcagattggcggcaatatcgggaccggagtgctc
tcgctggaaccggcgcatgactgcgaggtggtggtgctggagctgtcatcctatcagacc
gatctggcccgcgcgctcacaccggatgtggcggtcttcaccaatctctcgcccgatcat
ctggaccggcatggcggcccgggcgggtatttcgcggccaagcggcggctgtttgccgaa
ggcggaccggatcgctgcgtgatcggcgtggacgaggtcgagggccgctatctggccaac
cagatggggcagggaccgggcgatgaccgggtgatccgggtgtcatccggccagaagctg
gaaaatttcgcctggggcgtctttgcgcgcaaaggctttctcagcgaataccgcaagggg
cggcaggtcgcctcggtcgatctgcgggcgatcaccgggttgcccggcgcgcataaccat
cagaacgcctgcgccgcctatgccgcctgccgcgcggtcggcctcgccccgcgcgagatc
gaagcagcgtttcacagctttggcggccttccgcatcgcagccagaccatccgcgaactg
gacggggtgcgctatgtcaacgattcgaaggcgacgaatatcgacgccgccgggcaggca
ttgcaggcctttaagcggatccgatggattgcgggcgggctcggcaaggatggcgggatc
tccggtttgcagccgcatttcggcaatgtcgtgaaagcctatctgatcggccattcggca
cgcgactttgccttgcaactcggcgcgaccccgcatgaggtggtcgagacgatggacgag
gccgtctcccgcgcccatgccgaggcgacaagcggagaaaccgtacttctcgcccccgcc
gcggcgagtttcgaccaatacccgaatttcgagaaacgcggcgagcatttcaccgcgctc
gtgaacgcgctgtag
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