Paracoccus sediminicola: PAF18_02955
Help
Entry
PAF18_02955 CDS
T09284
Name
(GenBank) hydroxymethylglutaryl-CoA lyase
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
pdim
Paracoccus sediminicola
Pathway
pdim00280
Valine, leucine and isoleucine degradation
pdim00650
Butanoate metabolism
pdim00907
Pinene, camphor and geraniol degradation
pdim01100
Metabolic pathways
pdim01120
Microbial metabolism in diverse environments
pdim04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
pdim00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
PAF18_02955
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
PAF18_02955
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
PAF18_02955
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
PAF18_02955
Enzymes [BR:
pdim01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
PAF18_02955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMGL-like
Peripla_BP_3
Motif
Other DBs
NCBI-ProteinID:
WBU57421
LinkDB
All DBs
Position
603372..604235
Genome browser
AA seq
287 aa
AA seq
DB search
MSGPVEIFEMGPRDGLQNEKRLIPTEDKIALVDMLSGAGFRRIEVTSFVSPKWVPQMGDA
AQVMAGIARANGVSYAVLTPNIRGYEGARAAQADEVAVFASASEGFSKANLNASIAESLE
RFVPVVEAAKQDGIKVRGYVSVVTDCPFDGPTPPANVARVAAALSAMGCYEVSLGDTIGQ
GRPETIDAMLSAVLNEVPADRLAGHYHDTAGRALQNIDASLARGVRVFDAAVGGLGGCPY
APGAAGNVATEKVAAHLASAGYETGLDMDVITKAAEFARHLRQGGTA
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgagcggtccggtcgagatcttcgagatgggcccgcgtgacggcttgcagaacgaaaag
cggctgatccccaccgaagacaagatcgcgcttgtggacatgctgtccggcgcggggttc
cggcggatcgaggtcaccagcttcgtcagcccgaaatgggtgccgcagatgggcgatgcc
gcgcaggtcatggccgggatcgcgcgggcgaacggggtcagctatgcggtgctgacgccg
aacatcaggggctatgagggcgcgcgggccgcgcaggccgacgaggtggcggtcttcgcc
tcggcctcggaagggttcagcaaggccaatctcaacgccagcattgccgaaagtctggaa
cgatttgtcccggtggtggaggccgcgaagcaggatggcatcaaggtgcgcggctatgtc
agcgtggtgacggattgcccctttgacggaccgaccccgcccgcgaatgttgcccgcgtg
gcggcggcgctgtcggcgatggggtgctatgaagtcagcctcggcgacacgatcgggcag
gggcggccggaaaccatcgacgcgatgctgtcggcggtgttgaacgaggtgccagcggat
cggctggccgggcattaccacgacacggcggggcgggccttgcagaatatcgatgccagc
ctcgcgcgtggggtgcgggtcttcgacgctgcggtcggcgggctgggcggttgcccctat
gcgccgggcgccgcgggaaatgtggcgaccgagaaagtcgccgcgcatctcgcctcggcg
gggtatgagaccgggctggatatggatgtgatcacaaaagccgccgaattcgcgcggcat
ttgcggcagggaggaacggcatga
DBGET
integrated database retrieval system