Paracoccus sediminicola: PAF18_04605
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Entry
PAF18_04605 CDS
T09284
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pdim
Paracoccus sediminicola
Pathway
pdim00260
Glycine, serine and threonine metabolism
pdim00460
Cyanoamino acid metabolism
pdim00630
Glyoxylate and dicarboxylate metabolism
pdim00670
One carbon pool by folate
pdim00680
Methane metabolism
pdim01100
Metabolic pathways
pdim01110
Biosynthesis of secondary metabolites
pdim01120
Microbial metabolism in diverse environments
pdim01200
Carbon metabolism
pdim01230
Biosynthesis of amino acids
pdim01240
Biosynthesis of cofactors
pdim04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
pdim00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
PAF18_04605
09102 Energy metabolism
00680 Methane metabolism
PAF18_04605
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
PAF18_04605
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
PAF18_04605
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
PAF18_04605
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
PAF18_04605
Enzymes [BR:
pdim01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
PAF18_04605
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
WBU57722
LinkDB
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Position
complement(923433..924716)
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AA seq
427 aa
AA seq
DB search
MNRDQFFTAPLSAADPEIATAIDKELGRQRDEIELIASENIVSRAVIEAQGSVLTNKYAE
GYPGKRYYGGCEYVDVVETLAIERAKELFGAGFANVQPNSGSQMNQAVFLALLKPGDTFM
GLDLNSGGHLTHGSPVNMSGKWFNVVSYGVRAQDHQLDMEEVRAKAHEHKPKLILAGGTA
YSRSWDWAEFRKIADEVGAWLMVDMAHIAGLVAGGAHASPVPHAHVVTSTTHKSLRGPRG
GLILTNDAEIAKKVNSAVFPGLQGGPLMHVIAAKAVAFNEALDPAFKDYAAQVVRNAQAM
ADELMKGGIDIVSGGTDNHLCLADLRPKGVTGKAAEAALGRANITCNKNGVPFDPEKPFV
TSGIRLGAPAGTTRGFGEDEFRQIARWIVDVVDGLAANGDEGNAENEARVKDEVKALCAR
YPLYEGM
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgcgaccaattcttcaccgcccctctctccgccgccgatccagaaatcgccacc
gccatcgacaaggagcttggccgccagcgcgacgagatcgaactgatcgcttcggaaaac
atcgtctcccgcgcggtgatcgaggcgcagggcagcgtgctcaccaacaaatatgccgaa
ggctatccgggcaagcgctattacggcggctgcgaatatgtcgacgtggtcgagacgctg
gcgatcgagcgcgccaaggagcttttcggcgccgggttcgcgaatgtgcagcccaattcc
ggcagccagatgaaccaggccgtgtttctggccctgctgaagccgggcgataccttcatg
gggctggacctgaattcgggcggccacctgacgcatggttcgccggtcaacatgtcgggg
aaatggttcaacgtggtcagctatggtgtgcgcgcgcaggatcaccagctcgacatggaa
gaggtccgcgccaaggcacacgagcataagcccaagctgatcctcgccggcggcaccgcc
tatagccgcagctgggactgggccgagttccgcaagattgccgacgaggtcggcgcctgg
ctgatggtcgacatggcccatatcgcgggtctggtggcgggcggcgcccatgcctctccg
gtgccgcatgcccatgtcgtcacatcgaccacccataaatccctgcgcggtccgcgtggc
gggctgatcctgaccaatgacgccgagatcgccaaaaaggtgaactcggccgtgttcccc
ggccttcagggcggcccgctgatgcatgtcatcgccgccaaggcggtcgccttcaacgag
gcgctcgacccggctttcaaggattacgcagcgcaggtcgtgcgcaatgcgcaggcgatg
gcggatgagctgatgaagggcggcatcgacatcgtgtctggcgggaccgacaaccatctc
tgccttgccgatcttcggcccaagggcgtgaccggcaaggccgccgaagccgcgcttggc
cgcgccaacatcacctgcaacaagaacggcgtgccgttcgatcctgaaaaacccttcgtc
acttcgggcatccgcctgggggcgcccgcaggcaccacccgcggcttcggagaagatgaa
ttccgccagatcgcccgctggatcgtcgatgtggtcgacgggctcgccgcgaatggcgac
gagggcaatgccgagaacgaggcgcgggtgaaggacgaagtcaaggcgctctgcgcgcgc
tacccgctctacgaggggatgtaa
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