Paracoccus sediminicola: PAF18_04680
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Entry
PAF18_04680 CDS
T09284
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
pdim
Paracoccus sediminicola
Pathway
pdim02024
Quorum sensing
pdim03060
Protein export
pdim03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pdim00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
PAF18_04680 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
PAF18_04680 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PAF18_04680 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pdim02044
]
PAF18_04680 (ffh)
Enzymes [BR:
pdim01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
PAF18_04680 (ffh)
Secretion system [BR:
pdim02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
PAF18_04680 (ffh)
Eukaryotic Sec-SRP protein
PAF18_04680 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
Zeta_toxin
AAA_22
AAA_16
AAA_14
AAA_33
ResIII
AAA_5
AAA_31
DO-GTPase1
Thymidylate_kin
NACHT
AAA_18
AAA_7
ATPase_2
KTI12
APS_kinase
AAA_19
nSTAND_NTPase5
nSTAND3
YqeC
AAA
ArsA_ATPase
Motif
Other DBs
NCBI-ProteinID:
WBU57737
LinkDB
All DBs
Position
complement(935732..937225)
Genome browser
AA seq
497 aa
AA seq
DB search
MFENLSDRLGGVFDRLTKQGALTEDDVTAAMREVRTALLEADVSLPVARSFVKAVTGKAT
GAAVTKSVTPGQRVVKIVHDELIKTLQGEGEPDALRIDNPPAPILMVGLQGSGKTTTTAK
LAKRLKDREKKKVLMASLDTNRPAAMEQLAILGTQIGVDTLPIVKGESAVQIARRAKQQA
TLGGYDVYMLDTAGRLHIDEVLMDEVQAVRDVANPRETLLVVDGLTGQDAVNVATEFDGK
VGISGVVLTRMDGDGRGGAALSMRAVTGKPIRFVGLGEKMDALESFDAQRVAGRILGMGD
IVALVEKAQEVLEVEQAERMMKRFQKGMFNMNDLRSQLEQMQKMGGMGSIMQMMPGMQKM
AKQAEEAGMDDRMIRRQIALINSMTKKERANPALLQASRKKRIAAGAGMEVSELNKLLKM
QRQMADTMKKLGKMKGGMLKQAMRAMTGKGGGLPDMENVDPTKMAEATKMLQDPKGLGGQ
LGGAGLPGGLSGLFGKK
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgttcgagaatctttccgaccgtcttggcggcgtcttcgaccggctgaccaagcagggt
gccctgaccgaggatgacgtcaccgccgccatgcgcgaggtccgcaccgcgcttctggaa
gccgatgtctcgctgcccgtcgcccgcagctttgtcaaagcggtgaccggcaaggccacg
ggcgctgcggtcacgaaatcggtgacaccgggccagcgggtcgtgaagatcgtccatgac
gagctgatcaagacccttcagggcgagggcgaacccgacgcgttgcgcatcgacaacccg
cccgcgccgatcctgatggtcgggcttcagggctcgggcaagaccaccaccaccgccaag
ctggccaagaggctgaaggatcgcgagaagaagaaggtgctgatggcctcgctggacacg
aaccgtcccgcggcgatggaacagctggccattctcggcacccagatcggcgtggacacg
ctgcccatcgtcaagggcgaaagcgccgtccagatcgcaagacgcgcgaagcagcaggcc
acgcttggcggctatgacgtctatatgctggatacggcgggccgcctgcatatcgacgaa
gtgctgatggacgaggtgcaggccgtccgcgacgtcgccaacccgcgcgaaacgctgctg
gtcgtcgatggcctgaccggtcaggacgcggtgaatgtcgccaccgaattcgacggcaag
gtcgggatttccggcgtcgtgctgacccggatggatggcgacgggcgcggcggtgcagca
ctgtccatgcgtgccgtcaccggcaagcctatccgcttcgtcggcctgggcgagaagatg
gacgcgctcgaatccttcgacgcgcagcgtgtcgccggccgcatcctcggcatgggcgac
atcgtggcgcttgtcgagaaggcccaggaagtgctcgaggtcgaacaggccgagcgcatg
atgaagcgcttccagaagggcatgttcaacatgaacgaccttcgcagccaacttgagcag
atgcagaagatgggcggcatgggctcgatcatgcagatgatgccgggcatgcagaaaatg
gccaaacaggcggaagaggccggcatggacgacaggatgatccgccgccagatcgccctg
atcaactccatgaccaagaaggaacgcgccaaccctgccctgcttcaggcctcccgcaag
aaacgcatcgcggcgggcgccgggatggaggtatcggaactcaacaagcttctgaaaatg
cagcgccagatggccgacacgatgaagaagctcggcaagatgaagggcggcatgctgaaa
caggccatgcgcgccatgaccggcaagggcggcggactgcccgacatggaaaatgttgat
ccgacgaaaatggccgaggcgaccaagatgctgcaggaccccaaggggcttggcggccag
ctgggcggtgcgggcctgccgggcgggctttcggggctgttcgggaagaagtaa
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