Paracoccus sediminicola: PAF18_05150
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Entry
PAF18_05150 CDS
T09284
Name
(GenBank) DUF853 family protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
pdim
Paracoccus sediminicola
Brite
KEGG Orthology (KO) [BR:
pdim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pdim03400
]
PAF18_05150
DNA repair and recombination proteins [BR:
pdim03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
PAF18_05150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HerA_C
DUF87
FtsK_SpoIIIE
AAA_22
SLFN-g3_helicase
ResIII
AAA_10
AAA_30
T2SSE
TrwB_AAD_bind
AAA_7
AAA_19
AAA_16
AAA_6
AAA_25
TraG-D_C
Motif
Other DBs
NCBI-ProteinID:
WBU57816
LinkDB
All DBs
Position
complement(1039568..1041157)
Genome browser
AA seq
529 aa
AA seq
DB search
MQLIDPENGTIFIGGAGKDYAAPEHLLMKYANRHGLIAGATGTGKTVTLQTLAESLSVIG
VPVFLSDVKGDLAGLAKPGSTGAKLHDAFAKRAGTIGLDLDYQQFPVTFWDVFGEKGHPV
RTTPAEMGPLLLSRLLDLTDVQEGVLNIAFRVADEQGLALLDLADLQSMLVWVGQNASDL
SLSYGNVSTASVGAIQRALLTLENEGGDSLFGEPALELADLLRRDESGKGMINILAADRL
MNAPRLYSTFLLWLLSELFEQLPEVGDPEKPVAAFFFDEAHLLFDDAPKALVDKIEQVAR
LIRSKGVSVWFISQNPTDVPEDVLGQLGNRVQHALRAFTAKDQKALRLAAENYRPNPDFD
TAEAITEVGTGEAVTSFLEAKGVPGVAMRTLIRPPFSQLGPITDAERSAVMATSPMAAKY
DKRLDRDSAREILTKRAEEAAAEAQQAATPSTDDDDLWVVGGEKNESFTRARRYNPDLTF
SKKKSSGGRRSSRSDSVLTTLGKTVAREIGRSGTRTIMRGVLGGLFRGR
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgcagctgatcgacccggaaaacggcaccatcttcattggcggcgccggcaaggattac
gccgcgccggaacatcttctgatgaaatatgccaatcgtcacgggctgatcgccggcgcg
accggcaccggcaagacggtgacgctgcaaaccctggccgaatcgctttcggtcatcggg
gtgccggtgtttctgtccgatgtgaaaggcgatctggccgggctggcgaaaccgggctcg
accggggcgaagctgcatgacgccttcgccaagcgcgccggcacgatcgggctggatctc
gattaccagcaatttccggtcacgttctgggacgtgttcggcgagaagggccatccggtg
cgcaccacccccgccgagatggggccgctgctgctgtcgcgcttgctggatctgaccgat
gtgcaagagggcgtgctgaacatcgccttccgcgtcgcagacgagcaggggctggcgctt
ctggatctcgccgatctgcaatccatgctggtctgggtcgggcagaacgcctcggatctg
tcgctcagctatggcaatgtcagcaccgcctcggtcggcgcgatccagcgggccctgctg
acgctggaaaacgagggcggggattcgctgttcggagaaccggcgctggaactggccgat
ctcttgcggcgcgacgagagcggaaagggcatgataaacatccttgccgccgaccggctg
atgaacgcgccgcggctctattcgacattcctactctggctgctttcggaactgttcgag
cagcttcccgaggtgggcgaccccgaaaagcccgtcgcggccttcttctttgacgaagcg
catctgttgttcgacgatgcgcccaaggcgcttgtcgacaagatcgagcaggtggcacgg
ctgatccgctcgaaaggggtcagcgtctggttcatcagccagaacccgaccgacgtgccg
gaggatgttctgggccagcttggcaaccgggtgcagcatgcgctgcgggcctttaccgca
aaggatcagaaggcgctgcggctcgcggccgagaattaccgcccgaaccccgatttcgac
acggccgaggcgatcaccgaggttggcacgggcgaggcggtgacgtcgtttctcgaagcc
aagggcgtgcccggcgtggcgatgcggacattgatccgcccgcctttctcgcagcttggc
ccgatcaccgatgccgagcgcagcgcggtgatggcgacctcaccgatggcggccaaatac
gacaagaggctggaccgggattcggcgcgcgagatcctcacgaagcgcgccgaggaagcc
gcagccgaggcgcaacaagcggcgacgccctcaacggatgacgatgatctctgggtggtc
ggcggagagaagaacgaaagcttcacccgcgcgcggcgctataatccggacctcaccttt
tccaagaagaaaagtagcggtgggcggcgcagctcgcgcagcgactcggtgctgaccacc
ttggggaagaccgtcgcccgcgaaatcgggcgcagcggcacgcgcacgatcatgcgcggc
gttctgggcgggctgttccggggtcgctga
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