Paracoccus sediminicola: PAF18_05590
Help
Entry
PAF18_05590 CDS
T09284
Symbol
selB
Name
(GenBank) selenocysteine-specific translation elongation factor
KO
K03833
selenocysteine-specific elongation factor
Organism
pdim
Paracoccus sediminicola
Brite
KEGG Orthology (KO) [BR:
pdim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
pdim03012
]
PAF18_05590 (selB)
Translation factors [BR:
pdim03012
]
Eukaryotic type
Elongation factors
PAF18_05590 (selB)
Prokaryotic type
PAF18_05590 (selB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
WHD_2nd_SelB
WHD_3rd_SelB
Beta-barrel_SelB
GTP_EFTU_D2
WHD_2nd_SelB_bact
MMR_HSR1
GTP_EFTU_D4
RsgA_GTPase
EF-G_D2
SRPRB
Motif
Other DBs
NCBI-ProteinID:
WBU57899
LinkDB
All DBs
Position
complement(1133483..1135372)
Genome browser
AA seq
629 aa
AA seq
DB search
MILGTAGHIDHGKTALVQALTGVDADRLAEEKARGITVDLGFAYADLGDGSITGFVDMPG
HERLIHNMIAGAGGIDAALIVIAADDGIMPQTREHLEILSLLGLRRAVVAISKADLAGDE
RIEKLRRDIGATLAATPMAGAEVIAVSARSGRGIADLRDHLAGMAAETAERSRAGRFRMI
ADRAFTLDGVGTVVTGMVVSGTIAPGDDLIISPAGHEARVRGLRAQNRKTLRAGAGERVA
VNLSGIAKEGIHRGDVLLAPSLQAPSARVDAVLHWVDARAFTSGLRARLHVGAADAEVRV
VSLGGRLGADGGRLVQLVLDRPLALGWDEAFLLRDLSATRTLGGGRLLDLRPPARRRATE
ERRATLAAMAEPDPEAALQKLLDTSPHLVDLDGFLRDRALADDGAVVPGAAILGASPRYL
LSAEQHAALMAQLSERLAEFHAANPDLQGMAREALRLALRPRLPKPGFAALLREAAAAGQ
VALDGGFARLPSHAPQMSAEDETLYSRIAPALGGETRFRPPRVRDLAAETGVDEREIRRM
MKFAARLGRVDQIAQDHFFLRETTAEMAEMVRALSDDADGGWFTAPAFRDRTRNGRKVAI
QILDFFDRVGLTLRRGDLRRVNPHRAELF
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
gtgattctcggcacggctggccatatagaccacggcaagacggcgctggtgcaggccctg
accggggtggatgcggatcggctggccgaggaaaaggcgcgcggcatcaccgttgatctt
ggctttgcctatgcggatctgggcgatggctcgatcacgggtttcgtcgacatgccgggc
catgagcggcttatccacaacatgatcgccggggcgggcggcatcgacgcggcgctgatc
gtgatcgctgccgatgacgggatcatgccccagacccgcgagcatctggaaattctgtcg
ctgcttgggctgcgtcgcgctgtggtcgcgatcagcaaggccgacctggccggcgatgag
cgaatcgaaaagctgcgccgcgatatcggcgcgacgcttgccgcgacgcccatggccggg
gcagaggtgatcgccgtctcggcaagatccggtcggggcattgccgatctgcgcgaccat
ctggccggcatggccgccgagaccgccgagcgaagccgggcggggcgctttcgcatgatc
gctgaccgtgctttcacgctggacggggtcggcacggtggtgaccgggatggtcgtgtcg
ggaacaatcgcgccgggtgacgatctgatcatctctccggccgggcatgaggcgcgcgtt
cgcggcctgcgcgcccagaaccgcaagaccctccgagccggggcgggcgaacgggtcgcc
gtcaatctgagcggcattgccaaggaggggatccatcgcggcgatgttctgctggcacca
tcgcttcaagcgccgagcgcgcgggtcgatgcggtgctgcattgggtcgatgccagggcg
ttcaccagcgggctgcgcgcgcggctgcatgtcggtgcagccgatgccgaggtgcgtgtg
gtttcgctgggcggcaggcttggtgcagatggcgggaggctggtgcaactcgtgctcgac
cgcccgcttgcacttggctgggacgaggcttttctgctgcgcgatctctcggcgacgcgc
acattgggcggcggccgattgctggatctgcgcccgcccgcgcgccgccgtgcaaccgaa
gagcgccgcgcgaccttggcggcgatggcggaacccgacccggaggccgcgctgcaaaag
ctgctcgacacctcgccgcatcttgtcgatctcgacggttttctgcgcgaccgcgcgctg
gccgatgatggggcggtcgttccgggcgcggcgatccttggcgcgtccccgcgctatctt
ctgtcggccgagcagcacgcggcgctgatggcgcagctatccgagcggcttgcggagttt
cacgccgccaatcccgaccttcagggcatggcgcgcgaggcgcttcggctggcgctgcgc
ccgcgcctgcccaaacccggtttcgccgcattgctgcgcgaggccgcggctgccgggcag
gtcgcgctcgatggcggatttgcccggctgccgagccatgcaccgcagatgagcgccgag
gacgagacgctgtattcgcgcatcgctccggcgctcgggggcgagacgcggttccgtccg
ccgcgcgtgcgcgatctcgccgccgagaccggcgtggacgagcgagagatccggcggatg
atgaaattcgccgcccggctcggccgggtggaccagatcgcgcaggatcatttcttcctg
cgcgagaccactgccgagatggccgagatggtgcgagcgctgtcggacgatgctgacggt
ggctggttcaccgcccctgccttccgagaccgcacccggaacgggcgcaaggtggcgatc
cagatcctcgatttcttcgatcgcgtggggctgaccctgcggcgcggtgatctgcgccgt
gtgaacccgcatcgcgccgagctgttctga
DBGET
integrated database retrieval system
