Paracoccus sediminicola: PAF18_06145
Help
Entry
PAF18_06145 CDS
T09284
Symbol
trpB
Name
(GenBank) tryptophan synthase subunit beta
KO
K01696
tryptophan synthase beta chain [EC:
4.2.1.20
]
Organism
pdim
Paracoccus sediminicola
Pathway
pdim00260
Glycine, serine and threonine metabolism
pdim00400
Phenylalanine, tyrosine and tryptophan biosynthesis
pdim01100
Metabolic pathways
pdim01110
Biosynthesis of secondary metabolites
pdim01230
Biosynthesis of amino acids
Module
pdim_M00023
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:
pdim00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
PAF18_06145 (trpB)
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
PAF18_06145 (trpB)
Enzymes [BR:
pdim01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.20 tryptophan synthase
PAF18_06145 (trpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PALP
Motif
Other DBs
NCBI-ProteinID:
WBU58003
LinkDB
All DBs
Position
complement(1244130..1245359)
Genome browser
AA seq
409 aa
AA seq
DB search
MMERINSLSQGPDEQGRFGIFGGRFVSETLMPLILDLEAEYDRARNDPDFAAEMSDLWEH
YVGRPSPLYFAPRLTEELGGAKIYLKREELNHTGSHKINNVLGQILLARRMGKTRIIAET
GAGQHGVATATVCARFGLKCVVYMGAKDVERQAPNVFRMRLLGAEVVSVSSGKGTLKDAM
NDALRDWVTNVRDTFYCIGTVAGPHPYPRMVRDFQAVIGRETRDQIMRAEGRLPDTVIAC
IGGGSNAMGLFHPFLDDPEVRIIGVEAGGHGVDERMEHCASLTGGRAGVLHGNRTYLLQD
EAGQILDGHSISAGLDYPGIGPEHAWLHEQGRAEYVYVTDDEALEAFQLLCWTEGIIPAL
EPSHALAHITKIAPDLPKDHLIVLNLSGRGDKDIFTVAKNLGVEIDAGG
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgatggagcggatcaattctcttagccagggcccggacgagcaggggcgcttcgggatt
ttcggcgggcgcttcgtatccgagacgctgatgccactgatcctcgatctcgaggcggaa
tatgaccgggcgcgcaacgatcccgactttgcggccgagatgtcggatctctgggaacat
tacgtgggccggcccagcccgctttatttcgcgccgcgcctgaccgaagaactcggcggg
gcgaagatctatctcaagcgcgaagagctgaaccacaccggcagccacaagatcaacaac
gtgctgggccagatcctgctggcgcggcgcatgggcaagacccggatcatcgccgagacc
ggggccgggcagcacggcgtcgccaccgcaacggtctgcgcgcgcttcgggttgaaatgc
gtggtctatatgggggcgaaggatgtcgagcgtcaggcgccgaatgtgttccggatgcgt
cttctgggggccgaggtggtctcggtcagttcgggcaaggggacgctgaaggatgcgatg
aacgatgcgctgcgcgattgggtgaccaatgtgcgcgacaccttctattgcatcggcacg
gtggccgggccgcatccctatccgcgcatggtgcgcgatttccaggcggtgatcgggcgc
gagacgcgggaccagatcatgcgcgccgaaggtcggctgcccgatacggtcatcgcctgc
atcggcgggggatcgaacgcgatggggctgttccacccgtttctcgacgatcccgaggtg
cggatcatcggggtcgaggcaggcggccacggcgtcgatgagcgaatggaacattgcgcc
tcgctgaccggcgggcgggcaggggttctgcatggcaaccgcacctatctgttgcaggac
gaggccgggcagatccttgacgggcattcgatcagcgccgggctggactatcccggcatc
gggccggaacatgcctggctgcacgaacagggacgtgcggaatatgtctatgtcacggat
gatgaggcgctggaggcgttccagcttttatgctggaccgaaggcatcatcccggccctc
gaaccgagtcacgcgcttgcccacatcaccaagatcgccccggatcttccgaaggatcac
ctcatcgtgctgaacctgtcggggcgtggcgacaaggatatcttcaccgtcgcgaagaat
ctcggggtggagatcgacgcgggcggttaa
DBGET
integrated database retrieval system
