Paracoccus sediminicola: PAF18_06605
Help
Entry
PAF18_06605 CDS
T09284
Symbol
hemB
Name
(GenBank) porphobilinogen synthase
KO
K01698
porphobilinogen synthase [EC:
4.2.1.24
]
Organism
pdim
Paracoccus sediminicola
Pathway
pdim00860
Porphyrin metabolism
pdim01100
Metabolic pathways
pdim01110
Biosynthesis of secondary metabolites
pdim01120
Microbial metabolism in diverse environments
pdim01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
pdim00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
PAF18_06605 (hemB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pdim04147
]
PAF18_06605 (hemB)
Enzymes [BR:
pdim01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.24 porphobilinogen synthase
PAF18_06605 (hemB)
Exosome [BR:
pdim04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
PAF18_06605 (hemB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ALAD
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
WBU58090
LinkDB
All DBs
Position
1342142..1343140
Genome browser
AA seq
332 aa
AA seq
DB search
MSPSPILPPFPLTRLRRLRRSEALREMVTETRLTAADLIWPVFVTEIEGADIEIPSMPGV
QRVTLDGVRAAAERAARLGIPALCIFPHSAEELRTEGCERAWDPENIGNRAIRAVKETVP
ELMVMTDIALDPYNANGHDGIVRDGVIVNDETVDCLTRMAMAQVEAGADILGPSDMMDGR
IGALRMALERHGHSDVAIMSYAAKFASGFYGPFRDAVGASGRLVGDKKTYQVNPANREEA
LRCVARDLSEGADMVMVKPGMAYLDICREVRDRFGAPTFAYQVSGEYAMIEGAIRQGWLG
REVMLESLLAFRRAGCDGILTYFAPEAAQALA
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgagcccctctccgatcctgccgcccttcccgctgacccgcctgcgccgtctgcgccgc
agcgaggcgctgcgcgagatggtcacggaaacgcggctgaccgcggcggatctgatctgg
ccggtcttcgtcaccgagatcgagggcgccgatatcgagatcccgtcaatgcccggcgtg
cagcgcgtcacgctggacggggtcagggccgcggcggaacgggccgcgcgtctggggatc
ccggcgctctgcatcttcccccattcggccgaagagctgcgcaccgaaggctgcgagcgc
gcctgggacccggagaatatcggcaaccgcgccatccgggccgtcaaggaaaccgtgccc
gaattgatggtcatgaccgatatcgcgctcgacccctataacgcgaacgggcatgacggc
atcgtccgcgacggggtgatcgtgaatgacgaaaccgtcgactgcctgactcgcatggcc
atggcgcaggtcgaggcaggggcggatattcttggcccctcggacatgatggacgggcgg
atcggcgcgctgcgcatggcgctcgagcgccatggtcacagcgatgtcgcgatcatgtcc
tacgcggcgaaattcgccagcggcttctatggcccgttccgcgacgcggtcggcgcatcg
ggccggctggtcggcgacaagaaaacctatcaggtcaaccccgccaatcgcgaagaggcg
ctgcgctgcgtcgcccgcgacctgtcggaaggcgccgatatggtcatggtcaagcccggc
atggcctatctggatatctgccgcgaggtccgcgaccgcttcggcgcaccgaccttcgcc
tatcaggtcagcggagaatacgcgatgatcgagggcgcgatccgtcagggctggctcggc
cgcgaggtgatgctggaaagcctgctcgccttccgtcgcgccggctgtgacgggatcctc
acatatttcgcacccgaagccgctcaggctctggcctga
DBGET
integrated database retrieval system
