KEGG   Paracoccus sediminicola: PAF18_07765
Entry
PAF18_07765       CDS       T09284                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
pdim  Paracoccus sediminicola
Pathway
pdim00010  Glycolysis / Gluconeogenesis
pdim00020  Citrate cycle (TCA cycle)
pdim00260  Glycine, serine and threonine metabolism
pdim00280  Valine, leucine and isoleucine degradation
pdim00310  Lysine degradation
pdim00380  Tryptophan metabolism
pdim00620  Pyruvate metabolism
pdim00630  Glyoxylate and dicarboxylate metabolism
pdim00640  Propanoate metabolism
pdim00670  One carbon pool by folate
pdim00785  Lipoic acid metabolism
pdim01100  Metabolic pathways
pdim01110  Biosynthesis of secondary metabolites
pdim01120  Microbial metabolism in diverse environments
pdim01200  Carbon metabolism
pdim01210  2-Oxocarboxylic acid metabolism
pdim01240  Biosynthesis of cofactors
Module
pdim_M00009  Citrate cycle (TCA cycle, Krebs cycle)
pdim_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pdim_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
pdim_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:pdim00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    PAF18_07765 (lpdA)
   00020 Citrate cycle (TCA cycle)
    PAF18_07765 (lpdA)
   00620 Pyruvate metabolism
    PAF18_07765 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    PAF18_07765 (lpdA)
   00640 Propanoate metabolism
    PAF18_07765 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    PAF18_07765 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    PAF18_07765 (lpdA)
   00310 Lysine degradation
    PAF18_07765 (lpdA)
   00380 Tryptophan metabolism
    PAF18_07765 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    PAF18_07765 (lpdA)
   00670 One carbon pool by folate
    PAF18_07765 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pdim04147]
    PAF18_07765 (lpdA)
Enzymes [BR:pdim01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     PAF18_07765 (lpdA)
Exosome [BR:pdim04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   PAF18_07765 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 GIDA NAD_binding_8 FAD_oxidored FAD_binding_2 HI0933_like Lys_Orn_oxgnase Thi4 DAO AlaDh_PNT_C Lycopene_cycl FAD_binding_3 3HCDH_N Lipoprotein_17 DUF3123 UDPG_MGDP_dh_N
Other DBs
NCBI-ProteinID: WBU58306
LinkDB
Position
1575477..1576871
AA seq 464 aa
MSSYDLIVIGAGPGGYVCAIRAAQLGLKTAVVEGREALGGTCLNVGCIPSKALLHASHMY
HEAGHNFTKMGLMGDAPNVDWTVMQSYKADTVETNTKGIEFLFKKNKIDWIKGWAEITAP
GKVKVGEDEHEAKNIVIATGSEPATLKGVEVDNERGVIVDSTGALTLPEIPGSMVVIGAG
VIGLELGSVYARLGTEVTVIEYLDTITPGMDADVQKQFQKILGKQGIKFVLGAAVQSASA
ENGKAKVSYKLRKDDSEKEIATDVVLLATGRRPYVDGLGLDKIGVEMTDKGQVKIDEHWQ
TSVKGIYAIGDAVPGLMLAHKAGDEGSAAAEVIAGKAGHVNYDVIPGVIYTTPEVANVGL
TEAAAKETGRKIKTAKFPFMGNARAKAMFQSDGFVKMVVDAETDRVLGCHIIGPNAGEMI
HEVCVAMEFGASAEDIALTCHAHPTTSEAVREAALACGDGAIHV
NT seq 1395 nt   +upstreamnt  +downstreamnt
atgtccagctacgacctgatcgtcatcggcgccggccccggcggctatgtctgcgccatc
cgcgccgcccagcttgggctcaagacggcggtggtcgaaggccgcgaggcgctcggcggc
acctgtctgaatgtcggctgcatcccgtccaaggcgctgctgcatgcctcgcatatgtat
cacgaggccggacataatttcaccaagatgggcctcatgggcgatgcgccgaatgtcgac
tggacggtgatgcaaagctacaaggccgacacggtcgagaccaataccaagggcatcgag
ttcctgttcaagaagaacaagatcgactggatcaagggctgggccgagatcactgctccg
ggcaaggtgaaggtcggcgaggacgaacacgaggccaagaacatcgtcatcgccaccggc
tcggagccagcgacgctgaaaggcgtcgaggtcgacaatgaacgcggcgtgatcgtcgat
tcgaccggcgcgctgaccctgccggagatccccggctcgatggtggtgatcggcgcaggc
gtgatcgggctggaactcggatcggtctatgcgcggctcggcaccgaggtgacggtgatc
gaatatctggacacgatcacgcccggcatggacgccgatgtgcagaagcagttccagaag
atcctcggcaagcagggcatcaaattcgtgctgggcgcggcggtgcaatctgcctcggcc
gagaatggcaaggcgaaagtcagctataagctgcgcaaggatgacagcgagaaagagatc
gcgaccgatgtcgtcctgctggccaccgggcgtcgtccctatgtcgacgggctcggtctc
gacaagatcggcgtcgagatgaccgacaagggccaggtcaagatcgacgaacattggcag
accagtgtgaagggcatctatgcgattggcgacgcggtgccggggctgatgctggcccat
aaggcgggcgatgagggatctgccgccgccgaggtgatcgccggcaaggcggggcatgtg
aattacgacgtgatccccggcgtgatctataccacccccgaggttgccaatgtcggcctg
accgaggccgccgcgaaagagaccggacgcaagatcaagaccgcgaaattcccgttcatg
ggcaatgcccgcgccaaggcgatgttccagagcgacggcttcgtgaagatggtggtcgat
gccgagaccgaccgggttctgggctgtcatatcatcggcccaaatgcgggcgaaatgatc
cacgaggtctgcgtcgcgatggaattcggcgcctcggccgaggacatcgcgctgacctgt
cacgcccatccgaccacctcggaagccgtgcgcgaggcggcgcttgcctgcggtgacggc
gcgatccatgtctga

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