Paracoccus sediminicola: PAF18_09560
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Entry
PAF18_09560 CDS
T09284
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
pdim
Paracoccus sediminicola
Pathway
pdim03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pdim00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PAF18_09560 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdim03019
]
PAF18_09560 (groL)
03110 Chaperones and folding catalysts [BR:
pdim03110
]
PAF18_09560 (groL)
03029 Mitochondrial biogenesis [BR:
pdim03029
]
PAF18_09560 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pdim04147
]
PAF18_09560 (groL)
Enzymes [BR:
pdim01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
PAF18_09560 (groL)
Messenger RNA biogenesis [BR:
pdim03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
PAF18_09560 (groL)
Chaperones and folding catalysts [BR:
pdim03110
]
Heat shock proteins
HSP60 / Chaperonin
PAF18_09560 (groL)
Mitochondrial biogenesis [BR:
pdim03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
PAF18_09560 (groL)
Exosome [BR:
pdim04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
PAF18_09560 (groL)
Exosomal proteins of other body fluids (saliva and urine)
PAF18_09560 (groL)
Exosomal proteins of breast cancer cells
PAF18_09560 (groL)
Exosomal proteins of colorectal cancer cells
PAF18_09560 (groL)
Exosomal proteins of bladder cancer cells
PAF18_09560 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF7946
Motif
Other DBs
NCBI-ProteinID:
WBU55762
LinkDB
All DBs
Position
1924305..1925957
Genome browser
AA seq
550 aa
AA seq
DB search
MAGKDVKFNTDARDRMLKGVNILADAVKVTLGPKGRNVVIDKSFGAPRITKDGVTVAKEI
ELSDKFENMGAQMVREVASRTNDEAGDGTTTATVLAQAIVKEGMKAVAAGMNPMDLKRGI
DTATAKVVEAIKNASRPVNDSAEVAQVGTISANGEESIGKQIADAMQRVGNDGVITVEEN
KGLETEVEVVEGMQFDRGYLSPYFVTNPDKMVAELEDAYILLHEKKLSSLQPMVPLLESV
IQSGKPLLIIAEDVEGEALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLQDISILTGGQV
ISEDLGMKLENVTIDMLGTAKKVSINKDNTTIIDGAGDKAEIEARVGQIRQQIEETTSDY
DKEKLQERVAKLAGGVAVIRVGGMTEIEVKERKDRVDDALNATRAAVQEGVVVGGGVALV
QGAKALEGLTGANSDQDAGISLVRRALEAPMRQIAENAGVDGAVVAGKIRESNDNAFGFN
AQTEEYGDMFKFGVIDPAKVVRTALEDAASVAGLLITTEAMVAEKPEPKGAGGGAPDMGG
MGGMGGMGMM
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggctggtaaggacgtcaagttcaacaccgatgctcgcgaccgcatgctgaaaggcgtg
aacatcctcgccgatgcagtgaaggtcaccctcggcccgaaaggccgcaacgtcgtcatc
gacaaatccttcggcgcaccgcgcatcaccaaggacggtgtgacggttgccaaggaaatc
gagctgtccgacaagttcgaaaacatgggcgcccagatggtccgcgaagtcgcttcgcgc
accaatgacgaagctggcgacggcaccaccaccgcgacggtcctggctcaggccatcgtc
aaggaaggcatgaaggcggtcgccgccggcatgaacccgatggacctcaagcgcggcatc
gacactgccaccgcgaaagtcgtcgaagcgatcaagaacgcctcgcgcccggtgaatgat
tcggccgaagtcgctcaggtcggcaccatctcggccaatggcgaggaatcgatcggcaag
cagatcgccgacgccatgcagcgcgtgggcaatgacggcgtcatcaccgtcgaagagaac
aagggcctcgagaccgaagtcgaagtcgtcgaggggatgcagttcgaccgcggctatctg
tcgccttacttcgtgaccaaccccgacaagatggtcgccgaactggaagacgcctatatc
ctgctgcacgagaagaagctgtcgtcgctgcagccgatggttccgctgctggaatcggtg
atccagtcgggcaagccgctgctgattatcgcggaagacgtcgagggcgaggctctggcc
acgctggtcgtcaacaagctgcgtggcggtctgaaaatcgcggccgtcaaggctccgggc
tttggcgatcgccgcaaggccatgctgcaggacatctcgatcctgaccggcggccaggtg
atcagcgaagatctcggcatgaagctggagaatgtcaccatcgacatgctcggcaccgcg
aagaaagtctcgatcaacaaggacaacaccaccatcatcgatggcgccggtgacaaggcc
gagatcgaagcccgcgttggccagatccgtcagcagatcgaggaaaccaccagcgattac
gacaaggaaaagctgcaggaacgcgtggccaagctggccggcggcgttgccgtgatccgc
gtcggcggcatgaccgaaatcgaagtgaaagagcgcaaggaccgcgtcgatgacgctctg
aacgcgacccgtgctgcggttcaggaaggcgtcgtcgtgggtggcggtgttgctctggtt
cagggtgcaaaagcgcttgagggtctgaccggggcgaactccgatcaggacgctggcatc
tcgctggtgcgccgcgcgctcgaagcgccgatgcgtcagatcgccgagaacgccggtgtc
gacggcgctgtcgttgcgggaaagatccgcgaatcgaacgacaacgctttcggcttcaac
gcgcagaccgaagaatatggcgacatgttcaagttcggcgtgatcgaccccgcgaaggtc
gtccgcaccgctctggaagacgccgcttccgtcgctggcctgctgatcaccactgaggcc
atggtcgccgaaaagcccgagccgaaaggcgccggcggcggcgcccccgatatgggcggc
atgggcggcatgggcggtatggggatgatgtaa
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